RNA–Protein interactions for RNA: ENST00000283415.3

LPCAT1-201, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT1, Length 3,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-201ENST00000283415 MRPL27Q9P0M9 148 aaKnown RBP10.87□□□□□ -0.67
LPCAT1-201ENST00000283415 TGFAP01135 160 aa10.87□□□□□ -0.67
LPCAT1-201ENST00000283415 CRYGCP07315 174 aa10.87□□□□□ -0.67
LPCAT1-201ENST00000283415 FER1L6-AS1Q8NA97 138 aa10.87□□□□□ -0.67
LPCAT1-201ENST00000283415 GTSF1Q8WW33 167 aa10.87□□□□□ -0.67
LPCAT1-201ENST00000283415 MEGF9Q9H1U4 602 aa10.87□□□□□ -0.67
LPCAT1-201ENST00000283415 SAA4P35542 130 aa10.86□□□□□ -0.67
LPCAT1-201ENST00000283415 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.86□□□□□ -0.67
LPCAT1-201ENST00000283415 TRGV9Q99603 122 aa10.86□□□□□ -0.67
LPCAT1-201ENST00000283415 ASH1LQ9NR48 2969 aaKnown RBP10.86□□□□□ -0.67
LPCAT1-201ENST00000283415 IGLC1P0CG04 106 aa10.86□□□□□ -0.67
LPCAT1-201ENST00000283415 PLP1P60201 277 aa10.86□□□□□ -0.67
LPCAT1-201ENST00000283415 TMEM97Q5BJF2 176 aa10.86□□□□□ -0.67
LPCAT1-201ENST00000283415 Q71RC1 249 aaPredicted RBP10.86□□□□□ -0.67
LPCAT1-201ENST00000283415 KAAG1Q9UBP8 84 aa10.86□□□□□ -0.67
LPCAT1-201ENST00000283415 OVOL3O00110 214 aa10.86□□□□□ -0.67
LPCAT1-201ENST00000283415 UCNP55089 124 aa10.86□□□□□ -0.67
LPCAT1-201ENST00000283415 NDUFA3O95167 84 aa10.85□□□□□ -0.67
LPCAT1-201ENST00000283415 LEPP41159 167 aa10.85□□□□□ -0.67
LPCAT1-201ENST00000283415 HIST1H1AQ02539 215 aaPredicted RBP10.85□□□□□ -0.67
LPCAT1-201ENST00000283415 TTTY13Q9BZ97 58 aa10.85□□□□□ -0.67
LPCAT1-201ENST00000283415 MAP1LC3AQ9H492 121 aa10.85□□□□□ -0.67
LPCAT1-201ENST00000283415 GTSCR1Q86UQ5 136 aa10.85□□□□□ -0.67
LPCAT1-201ENST00000283415 NRGNQ92686 78 aa10.85□□□□□ -0.67
LPCAT1-201ENST00000283415 PEF1Q9UBV8 284 aaKnown RBP10.85□□□□□ -0.67
LPCAT1-201ENST00000283415 TOMM40O96008 361 aa10.85□□□□□ -0.67
LPCAT1-201ENST00000283415 METTL26Q96S19 204 aa10.85□□□□□ -0.67
LPCAT1-201ENST00000283415 NHP2Q9NX24 153 aaKnown RBP10.85□□□□□ -0.67
LPCAT1-201ENST00000283415 DEFB1P60022 68 aa10.84□□□□□ -0.67
LPCAT1-201ENST00000283415 C11orf44Q8N8P7 122 aa10.84□□□□□ -0.67
LPCAT1-201ENST00000283415 WIPF2Q8TF74 440 aaPredicted RBP10.84□□□□□ -0.67
LPCAT1-201ENST00000283415 IGKV1-17P01599 117 aa10.84□□□□□ -0.67
LPCAT1-201ENST00000283415 FAM74A4Q5TZK3 123 aa10.84□□□□□ -0.67
LPCAT1-201ENST00000283415 MYOZ3Q8TDC0 251 aa10.84□□□□□ -0.67
LPCAT1-201ENST00000283415 H7C2G1 150 aa10.84□□□□□ -0.67
LPCAT1-201ENST00000283415 CLEC2AQ6UVW9 174 aa10.84□□□□□ -0.67
LPCAT1-201ENST00000283415 IFI27L1Q96BM0 104 aa10.84□□□□□ -0.67
LPCAT1-201ENST00000283415 FAM231DQ6ZW35 169 aa10.84□□□□□ -0.67
LPCAT1-201ENST00000283415 ST20Q9HBF5 79 aa10.84□□□□□ -0.67
LPCAT1-201ENST00000283415 SRSF9Q13242 221 aaKnown RBP eCLIP10.83□□□□□ -0.684e-6■■□□□ 11.4
LPCAT1-201ENST00000283415 ATP5L2Q7Z4Y8 100 aa10.83□□□□□ -0.68
LPCAT1-201ENST00000283415 SPCS1Q9Y6A9 102 aa10.83□□□□□ -0.68
LPCAT1-201ENST00000283415 DCHS2Q6V1P9 2916 aa10.83□□□□□ -0.68
LPCAT1-201ENST00000283415 ATP6V0E1O15342 81 aa10.83□□□□□ -0.68
LPCAT1-201ENST00000283415 SH2D1AO60880 128 aa10.83□□□□□ -0.68
LPCAT1-201ENST00000283415 BMI1P35226 326 aa10.83□□□□□ -0.68
LPCAT1-201ENST00000283415 PSG9Q00887 426 aa10.83□□□□□ -0.68
LPCAT1-201ENST00000283415 PRRC2AP48634 2157 aaKnown RBP10.83□□□□□ -0.68
LPCAT1-201ENST00000283415 LOC107984156A0A0G2JMH3 177 aa10.83□□□□□ -0.68
LPCAT1-201ENST00000283415 FAM106AQ4KMX7 169 aa10.83□□□□□ -0.68
LPCAT1-201ENST00000283415 ARL17AQ8IVW1 177 aa10.83□□□□□ -0.68
LPCAT1-201ENST00000283415 HIST1H4GQ99525 98 aa10.83□□□□□ -0.68
LPCAT1-201ENST00000283415 SFTPCP11686 197 aa10.82□□□□□ -0.68
LPCAT1-201ENST00000283415 FABP2P12104 132 aa10.82□□□□□ -0.68
LPCAT1-201ENST00000283415 ATP5G2Q06055 141 aa10.82□□□□□ -0.68
LPCAT1-201ENST00000283415 GAGE12BA1L429 117 aa10.82□□□□□ -0.68
LPCAT1-201ENST00000283415 PET117Q6UWS5 81 aa10.82□□□□□ -0.68
LPCAT1-201ENST00000283415 MRPL52Q86TS9 123 aaKnown RBP10.82□□□□□ -0.68
LPCAT1-201ENST00000283415 CHCHD1Q96BP2 118 aaKnown RBP10.82□□□□□ -0.68
LPCAT1-201ENST00000283415 NEU4Q8WWR8 484 aaPredicted RBP10.82□□□□□ -0.68
LPCAT1-201ENST00000283415 MSRB1Q9NZV6 116 aa10.82□□□□□ -0.68
LPCAT1-201ENST00000283415 KLF12Q9Y4X4 402 aa10.82□□□□□ -0.68
LPCAT1-201ENST00000283415 TRAV30A0A087WSZ9 112 aa10.81□□□□□ -0.68
LPCAT1-201ENST00000283415 GATA1P15976 413 aaPredicted RBP10.81□□□□□ -0.68
LPCAT1-201ENST00000283415 ORAOV1Q8WV07 137 aa10.81□□□□□ -0.68
LPCAT1-201ENST00000283415 VGLL1Q99990 258 aa10.81□□□□□ -0.68
LPCAT1-201ENST00000283415 PRTN3P24158 256 aa10.81□□□□□ -0.68
LPCAT1-201ENST00000283415 MRPS16Q9Y3D3 137 aaKnown RBP10.81□□□□□ -0.68
LPCAT1-201ENST00000283415 FAM231BA6NCW3 169 aa10.81□□□□□ -0.68
LPCAT1-201ENST00000283415 HBDP02042 147 aa10.81□□□□□ -0.68
LPCAT1-201ENST00000283415 SMIM17P0DL12 118 aa10.81□□□□□ -0.68
LPCAT1-201ENST00000283415 SCGB1C2P0DMR2 95 aa10.81□□□□□ -0.68
LPCAT1-201ENST00000283415 CCL19Q99731 98 aa10.81□□□□□ -0.68
LPCAT1-201ENST00000283415 TRAV26-2A0A0B4J265 109 aa10.8□□□□□ -0.68
LPCAT1-201ENST00000283415 VWC2LB2RUY7 222 aa10.8□□□□□ -0.68
LPCAT1-201ENST00000283415 ZFP36P26651 326 aaKnown RBP10.8□□□□□ -0.68
LPCAT1-201ENST00000283415 EMP1P54849 157 aa10.8□□□□□ -0.68
LPCAT1-201ENST00000283415 LOXL1Q08397 574 aaPredicted RBP10.8□□□□□ -0.68
LPCAT1-201ENST00000283415 ZNF491Q8N8L2 437 aa10.8□□□□□ -0.68
LPCAT1-201ENST00000283415 MSRB2Q9Y3D2 182 aa10.8□□□□□ -0.68
LPCAT1-201ENST00000283415 HOXB4P17483 251 aaPredicted RBP10.8□□□□□ -0.68
LPCAT1-201ENST00000283415 PSG3Q16557 428 aa10.8□□□□□ -0.68
LPCAT1-201ENST00000283415 H3BUX3 64 aa10.8□□□□□ -0.68
LPCAT1-201ENST00000283415 H3BVH4 76 aa10.8□□□□□ -0.68
LPCAT1-201ENST00000283415 NBL1P41271 181 aa10.8□□□□□ -0.68
LPCAT1-201ENST00000283415 ADORA2A-AS1P86434 159 aa10.8□□□□□ -0.68
LPCAT1-201ENST00000283415 RASL11AQ6T310 242 aa10.8□□□□□ -0.68
LPCAT1-201ENST00000283415 DYNAPQ8N1N2 210 aa10.8□□□□□ -0.68
LPCAT1-201ENST00000283415 TRBV19A0A075B6N1 114 aa10.79□□□□□ -0.68
LPCAT1-201ENST00000283415 LINC01548A6NM66 108 aa10.79□□□□□ -0.68
LPCAT1-201ENST00000283415 C16orf54Q6UWD8 224 aa10.79□□□□□ -0.68
LPCAT1-201ENST00000283415 TNFRSF14Q92956 283 aa10.79□□□□□ -0.68
LPCAT1-201ENST00000283415 MLST8Q9BVC4 326 aa10.79□□□□□ -0.68
LPCAT1-201ENST00000283415 K7EIM0 57 aa10.79□□□□□ -0.68
LPCAT1-201ENST00000283415 IGLV1-47P01700 117 aa10.79□□□□□ -0.68
LPCAT1-201ENST00000283415 CTRLP40313 264 aa10.79□□□□□ -0.68
LPCAT1-201ENST00000283415 SAPCD1Q5SSQ6 148 aa10.79□□□□□ -0.68
LPCAT1-201ENST00000283415 SPATA12Q7Z6I5 190 aa10.79□□□□□ -0.68
LPCAT1-201ENST00000283415 SMIM12Q96EX1 92 aa10.79□□□□□ -0.68
LPCAT1-201ENST00000283415 SHANK2-AS3Q9BTD1 123 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms