RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 DNAH11Q96DT5 4516 aa10.17□□□□□ -0.78
HMGN3-201ENST00000275036 IFNA5P01569 189 aa10.16□□□□□ -0.78
HMGN3-201ENST00000275036 P0DMU3 169 aa10.16□□□□□ -0.78
HMGN3-201ENST00000275036 FAM231AP0DMU4 169 aa10.16□□□□□ -0.78
HMGN3-201ENST00000275036 FAM231CP0DMU5 169 aa10.16□□□□□ -0.78
HMGN3-201ENST00000275036 ZNF493Q6ZR52 646 aa10.16□□□□□ -0.78
HMGN3-201ENST00000275036 POM121L12Q8N7R1 296 aa10.16□□□□□ -0.78
HMGN3-201ENST00000275036 SCGB1C1Q8TD33 95 aa10.16□□□□□ -0.78
HMGN3-201ENST00000275036 VGLL1Q99990 258 aa10.16□□□□□ -0.78
HMGN3-201ENST00000275036 AAMDCQ9H7C9 122 aa10.16□□□□□ -0.78
HMGN3-201ENST00000275036 NOP10Q9NPE3 64 aaKnown RBP10.16□□□□□ -0.78
HMGN3-201ENST00000275036 TIMM8BQ9Y5J9 83 aaPredicted RBP10.16□□□□□ -0.78
HMGN3-201ENST00000275036 PKHD1P08F94 4074 aa10.16□□□□□ -0.78
HMGN3-201ENST00000275036 KLLNB2CW77 178 aa10.15□□□□□ -0.78
HMGN3-201ENST00000275036 OR7C2O60412 319 aa10.15□□□□□ -0.78
HMGN3-201ENST00000275036 CD300CQ08708 224 aa10.15□□□□□ -0.78
HMGN3-201ENST00000275036 BTN1A1Q13410 526 aa10.15□□□□□ -0.78
HMGN3-201ENST00000275036 Q5BKY6 102 aa10.15□□□□□ -0.78
HMGN3-201ENST00000275036 C9orf47Q6ZRZ4 202 aa10.15□□□□□ -0.78
HMGN3-201ENST00000275036 LINC00477Q96M19 166 aa10.15□□□□□ -0.78
HMGN3-201ENST00000275036 MED28Q9H204 178 aa10.15□□□□□ -0.78
HMGN3-201ENST00000275036 C7orf71A4D174 169 aa10.14□□□□□ -0.79
HMGN3-201ENST00000275036 ZNF324O75467 553 aaPredicted RBP10.14□□□□□ -0.79
HMGN3-201ENST00000275036 SLC25A5P05141 298 aaKnown RBP10.14□□□□□ -0.79
HMGN3-201ENST00000275036 PRR9Q5T870 116 aa10.14□□□□□ -0.79
HMGN3-201ENST00000275036 Q6ZQT7 251 aa10.14□□□□□ -0.79
HMGN3-201ENST00000275036 MUC4Q99102 2169 aa10.14□□□□□ -0.79
HMGN3-201ENST00000275036 CBY3A6NI87 242 aa10.13□□□□□ -0.79
HMGN3-201ENST00000275036 CRISP2P16562 243 aa10.13□□□□□ -0.79
HMGN3-201ENST00000275036 RAB2AP61019 212 aa10.13□□□□□ -0.79
HMGN3-201ENST00000275036 RANP62826 216 aaKnown RBP10.13□□□□□ -0.79
HMGN3-201ENST00000275036 UBE2L3P68036 154 aaKnown RBP10.13□□□□□ -0.79
HMGN3-201ENST00000275036 ZFAND2AQ8N6M9 145 aa10.13□□□□□ -0.79
HMGN3-201ENST00000275036 LINC00612Q8N6U2 182 aa10.13□□□□□ -0.79
HMGN3-201ENST00000275036 PYGO2Q9BRQ0 406 aa10.13□□□□□ -0.79
HMGN3-201ENST00000275036 Q9H3A6 140 aa10.13□□□□□ -0.79
HMGN3-201ENST00000275036 F5H768 121 aa10.12□□□□□ -0.79
HMGN3-201ENST00000275036 M0R2N4 97 aa10.12□□□□□ -0.79
HMGN3-201ENST00000275036 RTL8CO15255 209 aa10.12□□□□□ -0.79
HMGN3-201ENST00000275036 ATP5G1P05496 136 aa10.12□□□□□ -0.79
HMGN3-201ENST00000275036 RNASE4P34096 147 aaKnown RBP10.12□□□□□ -0.79
HMGN3-201ENST00000275036 ATP5G3P48201 142 aa10.12□□□□□ -0.79
HMGN3-201ENST00000275036 KHDC3LQ587J8 217 aa10.12□□□□□ -0.79
HMGN3-201ENST00000275036 CCDC28AQ8IWP9 274 aa10.12□□□□□ -0.79
HMGN3-201ENST00000275036 Q8TAT8 98 aa10.12□□□□□ -0.79
HMGN3-201ENST00000275036 AQP10Q96PS8 301 aa10.12□□□□□ -0.79
HMGN3-201ENST00000275036 ZNF492Q9P255 531 aa10.12□□□□□ -0.79
HMGN3-201ENST00000275036 A0A1B0GVY2 172 aa10.11□□□□□ -0.79
HMGN3-201ENST00000275036 M6PRP20645 277 aa10.11□□□□□ -0.79
HMGN3-201ENST00000275036 TMEM78Q5T7P6 136 aa10.11□□□□□ -0.79
HMGN3-201ENST00000275036 LYPD1Q8N2G4 141 aa10.11□□□□□ -0.79
HMGN3-201ENST00000275036 C15orf53Q8NAA6 179 aa10.11□□□□□ -0.79
HMGN3-201ENST00000275036 C11orf72Q8NBR9 251 aa10.11□□□□□ -0.79
HMGN3-201ENST00000275036 PCLOQ9Y6V0 5065 aa10.1□□□□□ -0.79
HMGN3-201ENST00000275036 IGLV2-18A0A075B6J9 118 aa10.1□□□□□ -0.79
HMGN3-201ENST00000275036 GAGE12BA1L429 117 aa10.1□□□□□ -0.79
HMGN3-201ENST00000275036 SNURFLB1AK76 121 aa10.1□□□□□ -0.79
HMGN3-201ENST00000275036 GAGE7O76087 117 aa10.1□□□□□ -0.79
HMGN3-201ENST00000275036 GPX1P07203 203 aa10.1□□□□□ -0.79
HMGN3-201ENST00000275036 NMBP08949 121 aa10.1□□□□□ -0.79
HMGN3-201ENST00000275036 GIPP09681 153 aaPredicted RBP10.1□□□□□ -0.79
HMGN3-201ENST00000275036 GAGE12FP0CL80 117 aa10.1□□□□□ -0.79
HMGN3-201ENST00000275036 GAGE12GP0CL81 117 aa10.1□□□□□ -0.79
HMGN3-201ENST00000275036 GAGE12IP0CL82 117 aa10.1□□□□□ -0.79
HMGN3-201ENST00000275036 ZNF138P52744 262 aa10.1□□□□□ -0.79
HMGN3-201ENST00000275036 TAS2R45P59539 299 aa10.1□□□□□ -0.79
HMGN3-201ENST00000275036 ACOT6Q3I5F7 207 aaPredicted RBP10.1□□□□□ -0.79
HMGN3-201ENST00000275036 UBE2DNLQ8IWF7 75 aa10.1□□□□□ -0.79
HMGN3-201ENST00000275036 HSD17B11Q8NBQ5 300 aa10.1□□□□□ -0.79
HMGN3-201ENST00000275036 LINC00467Q9BRT7 94 aa10.1□□□□□ -0.79
HMGN3-201ENST00000275036 RNF222A6NCQ9 220 aa10.09□□□□□ -0.79
HMGN3-201ENST00000275036 DIRC3C9JPN6 131 aa10.09□□□□□ -0.79
HMGN3-201ENST00000275036 HMGB3O15347 200 aaKnown RBP10.09□□□□□ -0.79
HMGN3-201ENST00000275036 DAZ2Q13117 558 aaKnown RBP10.09□□□□□ -0.79
HMGN3-201ENST00000275036 RNF212Q495C1 297 aa10.09□□□□□ -0.79
HMGN3-201ENST00000275036 Q6ZR54 194 aa10.09□□□□□ -0.79
HMGN3-201ENST00000275036 Q6ZTI0 123 aa10.09□□□□□ -0.79
HMGN3-201ENST00000275036 EIF4E3Q8N5X7 224 aaKnown RBP10.09□□□□□ -0.79
HMGN3-201ENST00000275036 OR10G4Q8NGN3 311 aa10.09□□□□□ -0.79
HMGN3-201ENST00000275036 OR10G9Q8NGN4 311 aa10.09□□□□□ -0.79
HMGN3-201ENST00000275036 OR10G7Q8NGN6 311 aa10.09□□□□□ -0.79
HMGN3-201ENST00000275036 OR2G3Q8NGZ4 309 aa10.09□□□□□ -0.79
HMGN3-201ENST00000275036 GSN-AS1Q9NRJ2 163 aa10.09□□□□□ -0.79
HMGN3-201ENST00000275036 TP53TG3Q9ULZ0 132 aa10.09□□□□□ -0.79
HMGN3-201ENST00000275036 RBAKDNA6NC62 111 aa10.08□□□□□ -0.8
HMGN3-201ENST00000275036 G3V3Q6 166 aa10.08□□□□□ -0.8
HMGN3-201ENST00000275036 HOXA5P20719 270 aa10.08□□□□□ -0.8
HMGN3-201ENST00000275036 ATP6V0CP27449 155 aa10.08□□□□□ -0.8
HMGN3-201ENST00000275036 CSN1S1P47710 185 aa10.08□□□□□ -0.8
HMGN3-201ENST00000275036 ZNF266Q14584 549 aa10.08□□□□□ -0.8
HMGN3-201ENST00000275036 LGALS9BQ3B8N2 356 aa10.08□□□□□ -0.8
HMGN3-201ENST00000275036 ANXA2RQ3ZCQ2 193 aa10.08□□□□□ -0.8
HMGN3-201ENST00000275036 PQLC2Q6ZP29 291 aa10.08□□□□□ -0.8
HMGN3-201ENST00000275036 HYLS1Q96M11 299 aa10.08□□□□□ -0.8
HMGN3-201ENST00000275036 SH3BGRL3Q9H299 93 aa10.08□□□□□ -0.8
HMGN3-201ENST00000275036 TRBV7-9A0A0J9YWB2 115 aa10.07□□□□□ -0.8
HMGN3-201ENST00000275036 A0A1W2PPV4 95 aa10.07□□□□□ -0.8
HMGN3-201ENST00000275036 PGPA6NDG6 321 aa10.07□□□□□ -0.8
HMGN3-201ENST00000275036 NUDT3O95989 172 aa10.07□□□□□ -0.8
HMGN3-201ENST00000275036 RGS21Q2M5E4 152 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms