RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 RPL18Q07020 188 aaKnown RBP7.03□□□□□ -1.28
CTDSPL-201ENST00000273179 CACNA1CQ13936 2221 aa7.03□□□□□ -1.28
CTDSPL-201ENST00000273179 URB1O60287 2271 aaKnown RBP7.03□□□□□ -1.28
CTDSPL-201ENST00000273179 PSMB8P28062 276 aa7.03□□□□□ -1.28
CTDSPL-201ENST00000273179 PEBP1P30086 187 aaKnown RBP7.03□□□□□ -1.28
CTDSPL-201ENST00000273179 ZNF706Q9Y5V0 76 aaPredicted RBP7.03□□□□□ -1.28
CTDSPL-201ENST00000273179 SCN3AQ9NY46 2000 aa7.03□□□□□ -1.28
CTDSPL-201ENST00000273179 KIAA1549Q9HCM3 1950 aa7.03□□□□□ -1.28
CTDSPL-201ENST00000273179 TRGV5A0A0B4J1U4 118 aa7.03□□□□□ -1.28
CTDSPL-201ENST00000273179 SCRG1O75711 98 aa7.03□□□□□ -1.28
CTDSPL-201ENST00000273179 ZNF726P1Q15940 193 aa7.03□□□□□ -1.28
CTDSPL-201ENST00000273179 Q6ZS49 121 aa7.03□□□□□ -1.28
CTDSPL-201ENST00000273179 KTN1-AS1Q86SY8 53 aa7.03□□□□□ -1.28
CTDSPL-201ENST00000273179 MARCH3Q86UD3 253 aa7.03□□□□□ -1.28
CTDSPL-201ENST00000273179 IGHV3OR15-7A0A075B7D8 119 aa7.03□□□□□ -1.28
CTDSPL-201ENST00000273179 A0A1B0GTH9 108 aa7.03□□□□□ -1.28
CTDSPL-201ENST00000273179 MYCNOSP40205 109 aa7.03□□□□□ -1.28
CTDSPL-201ENST00000273179 LAGE3Q14657 143 aa7.02□□□□□ -1.29
CTDSPL-201ENST00000273179 SMRP1Q8NCR6 262 aa7.02□□□□□ -1.29
CTDSPL-201ENST00000273179 IFI27L1Q96BM0 104 aa7.02□□□□□ -1.29
CTDSPL-201ENST00000273179 FOXQ1Q9C009 403 aa7.02□□□□□ -1.29
CTDSPL-201ENST00000273179 PLXNB1O43157 2135 aa7.02□□□□□ -1.29
CTDSPL-201ENST00000273179 CRYBA2P53672 197 aa7.02□□□□□ -1.29
CTDSPL-201ENST00000273179 FAM104BQ5XKR9 115 aa7.02□□□□□ -1.29
CTDSPL-201ENST00000273179 LRRK1Q38SD2 2015 aa7.02□□□□□ -1.29
CTDSPL-201ENST00000273179 TRIOBPQ9H2D6 2365 aa7.02□□□□□ -1.29
CTDSPL-201ENST00000273179 M0R381 172 aa7.02□□□□□ -1.29
CTDSPL-201ENST00000273179 LGALS9O00182 355 aa7.02□□□□□ -1.29
CTDSPL-201ENST00000273179 A0A0B4J2C4 111 aa7.01□□□□□ -1.29
CTDSPL-201ENST00000273179 ZGLP1P0C6A0 271 aa7.01□□□□□ -1.29
CTDSPL-201ENST00000273179 FOLR3P41439 243 aa7.01□□□□□ -1.29
CTDSPL-201ENST00000273179 LINC00310P59036 64 aa7.01□□□□□ -1.29
CTDSPL-201ENST00000273179 LINC00173Q6ZV60 143 aa7.01□□□□□ -1.29
CTDSPL-201ENST00000273179 SLC25A29Q8N8R3 303 aa7.01□□□□□ -1.29
CTDSPL-201ENST00000273179 NKAPP1Q8N9T2 125 aa7.01□□□□□ -1.29
CTDSPL-201ENST00000273179 SCN2AQ99250 2005 aa7.01□□□□□ -1.29
CTDSPL-201ENST00000273179 TRBV25-1A0A075B6N4 114 aa7.01□□□□□ -1.29
CTDSPL-201ENST00000273179 C2CD4DB7Z1M9 353 aa7.01□□□□□ -1.29
CTDSPL-201ENST00000273179 WISP1O95388 367 aa7.01□□□□□ -1.29
CTDSPL-201ENST00000273179 IGFL2Q6UWQ7 119 aa7.01□□□□□ -1.29
CTDSPL-201ENST00000273179 HCFC1P51610 2035 aa7.01□□□□□ -1.29
CTDSPL-201ENST00000273179 C2orf16Q68DN1 1984 aa7.01□□□□□ -1.29
CTDSPL-201ENST00000273179 ZNF73O43830 326 aaPredicted RBP7.01□□□□□ -1.29
CTDSPL-201ENST00000273179 HBDP02042 147 aa7.01□□□□□ -1.29
CTDSPL-201ENST00000273179 MP68P56378 58 aa7.01□□□□□ -1.29
CTDSPL-201ENST00000273179 OSTCQ9NRP0 149 aa7.01□□□□□ -1.29
CTDSPL-201ENST00000273179 TRBV7-7A0A0K0K1E9 115 aa7.01□□□□□ -1.29
CTDSPL-201ENST00000273179 TEX49A0A1B0GTD5 131 aa7.01□□□□□ -1.29
CTDSPL-201ENST00000273179 UBE2AP49459 152 aa7.01□□□□□ -1.29
CTDSPL-201ENST00000273179 FHL3Q13643 280 aa7.01□□□□□ -1.29
CTDSPL-201ENST00000273179 TEPPQ6URK8 271 aa7.01□□□□□ -1.29
CTDSPL-201ENST00000273179 MED12Q93074 2177 aa7□□□□□ -1.29
CTDSPL-201ENST00000273179 C12orf77C9JDV5 145 aa7□□□□□ -1.29
CTDSPL-201ENST00000273179 COX7A2LO14548 114 aa7□□□□□ -1.29
CTDSPL-201ENST00000273179 LYPD6Q86Y78 171 aa7□□□□□ -1.29
CTDSPL-201ENST00000273179 DYNLRB2Q8TF09 96 aa7□□□□□ -1.29
CTDSPL-201ENST00000273179 TDRD6O60522 2096 aaKnown RBP7□□□□□ -1.29
CTDSPL-201ENST00000273179 LYPD3O95274 346 aa7□□□□□ -1.29
CTDSPL-201ENST00000273179 ATP5EP56381 51 aaPredicted RBP7□□□□□ -1.29
CTDSPL-201ENST00000273179 EDDM3BP56851 147 aa7□□□□□ -1.29
CTDSPL-201ENST00000273179 CD177Q8N6Q3 437 aa7□□□□□ -1.29
CTDSPL-201ENST00000273179 UBALD1Q8TB05 177 aa7□□□□□ -1.29
CTDSPL-201ENST00000273179 ZNF503Q96F45 646 aa7□□□□□ -1.29
CTDSPL-201ENST00000273179 ABHD14BQ96IU4 210 aa7□□□□□ -1.29
CTDSPL-201ENST00000273179 COL4A3Q01955 1670 aa7□□□□□ -1.29
CTDSPL-201ENST00000273179 KIF26AQ9ULI4 1882 aaPredicted RBP7□□□□□ -1.29
CTDSPL-201ENST00000273179 TRBV27A0A0K0K1C4 114 aa7□□□□□ -1.29
CTDSPL-201ENST00000273179 A0A1W2PQD3 144 aa7□□□□□ -1.29
CTDSPL-201ENST00000273179 IQCF6A8MYZ5 107 aa7□□□□□ -1.29
CTDSPL-201ENST00000273179 K7EM74 188 aa7□□□□□ -1.29
CTDSPL-201ENST00000273179 ZNF818PQ6ZRF7 136 aa7□□□□□ -1.29
CTDSPL-201ENST00000273179 C9orf139Q6ZV77 190 aa7□□□□□ -1.29
CTDSPL-201ENST00000273179 DCANP1Q8TF63 244 aa7□□□□□ -1.29
CTDSPL-201ENST00000273179 HELZP42694 1942 aaKnown RBP7□□□□□ -1.29
CTDSPL-201ENST00000273179 ZNF815PA8K554 130 aa6.99□□□□□ -1.29
CTDSPL-201ENST00000273179 C8orf87E5RJ46 101 aa6.99□□□□□ -1.29
CTDSPL-201ENST00000273179 CGAP01215 116 aa6.99□□□□□ -1.29
CTDSPL-201ENST00000273179 RUSC1-AS1Q66K80 236 aa6.99□□□□□ -1.29
CTDSPL-201ENST00000273179 SPACA3Q8IXA5 215 aa6.99□□□□□ -1.29
CTDSPL-201ENST00000273179 FANCD2OSQ96PS1 177 aa6.99□□□□□ -1.29
CTDSPL-201ENST00000273179 R4GMQ9 66 aa6.99□□□□□ -1.29
CTDSPL-201ENST00000273179 SCO2A0A1W2PP80 73 aa6.99□□□□□ -1.29
CTDSPL-201ENST00000273179 GNB1P62873 340 aa6.99□□□□□ -1.29
CTDSPL-201ENST00000273179 LHFPL1Q86WI0 220 aa6.99□□□□□ -1.29
CTDSPL-201ENST00000273179 SLC25A45Q8N413 288 aa6.99□□□□□ -1.29
CTDSPL-201ENST00000273179 FAM60AQ9NP50 221 aa6.99□□□□□ -1.29
CTDSPL-201ENST00000273179 ASPMQ8IZT6 3477 aa6.99□□□□□ -1.29
CTDSPL-201ENST00000273179 TRAV12-3A0A0B4J271 114 aa6.99□□□□□ -1.29
CTDSPL-201ENST00000273179 NANOS2P60321 138 aaKnown RBP6.99□□□□□ -1.29
CTDSPL-201ENST00000273179 FAM19A3Q7Z5A8 133 aa6.99□□□□□ -1.29
CTDSPL-201ENST00000273179 PSPNO60542 156 aa6.99□□□□□ -1.29
CTDSPL-201ENST00000273179 SPRNQ5BIV9 151 aa6.99□□□□□ -1.29
CTDSPL-201ENST00000273179 CEMP1Q6PRD7 247 aaPredicted RBP6.99□□□□□ -1.29
CTDSPL-201ENST00000273179 TMEM52Q8NDY8 209 aa6.99□□□□□ -1.29
CTDSPL-201ENST00000273179 GFI1Q99684 422 aa6.99□□□□□ -1.29
CTDSPL-201ENST00000273179 ALPK3Q96L96 1907 aa6.98□□□□□ -1.29
CTDSPL-201ENST00000273179 IGHV1OR21-1A0A087WYE8 117 aa6.98□□□□□ -1.29
CTDSPL-201ENST00000273179 RIGQ13278 110 aa6.98□□□□□ -1.29
CTDSPL-201ENST00000273179 ZFP2Q6ZN57 461 aa6.98□□□□□ -1.29
CTDSPL-201ENST00000273179 ZGRF1Q86YA3 2104 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms