RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 LOXL3P58215 753 aa12.37□□□□□ -0.43
CTDSP1-201ENST00000273062 Q6ZS92 163 aa12.37□□□□□ -0.43
CTDSP1-201ENST00000273062 C1orf162Q8NEQ5 155 aaPredicted RBP12.37□□□□□ -0.43
CTDSP1-201ENST00000273062 MBD3L4A6NDZ8 208 aaPredicted RBP12.37□□□□□ -0.43
CTDSP1-201ENST00000273062 MBD3L3A6NE82 208 aaPredicted RBP12.37□□□□□ -0.43
CTDSP1-201ENST00000273062 MBD3L5A6NJ08 208 aaPredicted RBP12.37□□□□□ -0.43
CTDSP1-201ENST00000273062 H3BVH4 76 aa12.37□□□□□ -0.43
CTDSP1-201ENST00000273062 CRIP1P50238 77 aa12.37□□□□□ -0.43
CTDSP1-201ENST00000273062 C22orf34Q6ZV56 151 aa12.37□□□□□ -0.43
CTDSP1-201ENST00000273062 MBD3L2Q8NHZ7 208 aaPredicted RBP12.37□□□□□ -0.43
CTDSP1-201ENST00000273062 ACACAQ13085 2346 aa12.36□□□□□ -0.43
CTDSP1-201ENST00000273062 CENPVL3A0A0U1RRI6 287 aa12.36□□□□□ -0.43
CTDSP1-201ENST00000273062 IL4P05112 153 aa12.36□□□□□ -0.43
CTDSP1-201ENST00000273062 TNFRSF1AP19438 455 aa12.36□□□□□ -0.43
CTDSP1-201ENST00000273062 LEPP41159 167 aa12.36□□□□□ -0.43
CTDSP1-201ENST00000273062 OR1L4Q8NGR5 311 aa12.36□□□□□ -0.43
CTDSP1-201ENST00000273062 SLC25A15Q9Y619 301 aa12.36□□□□□ -0.43
CTDSP1-201ENST00000273062 HOXA3O43365 443 aaPredicted RBP12.36□□□□□ -0.43
CTDSP1-201ENST00000273062 IFITM1P13164 125 aa12.36□□□□□ -0.43
CTDSP1-201ENST00000273062 LYZL1Q6UWQ5 148 aa12.36□□□□□ -0.43
CTDSP1-201ENST00000273062 IGFL3Q6UXB1 125 aa12.36□□□□□ -0.43
CTDSP1-201ENST00000273062 ZNF493Q6ZR52 646 aa12.36□□□□□ -0.43
CTDSP1-201ENST00000273062 MRPL35Q9NZE8 188 aaKnown RBP12.36□□□□□ -0.43
CTDSP1-201ENST00000273062 ZNRD1Q9P1U0 126 aa12.36□□□□□ -0.43
CTDSP1-201ENST00000273062 ICE1Q9Y2F5 2266 aa12.36□□□□□ -0.43
CTDSP1-201ENST00000273062 M0R1B8 84 aa12.35□□□□□ -0.43
CTDSP1-201ENST00000273062 THBDP07204 575 aa12.35□□□□□ -0.43
CTDSP1-201ENST00000273062 MEIG1Q5JSS6 88 aa12.35□□□□□ -0.43
CTDSP1-201ENST00000273062 CD177Q8N6Q3 437 aa12.35□□□□□ -0.43
CTDSP1-201ENST00000273062 RAB1BQ9H0U4 201 aa12.35□□□□□ -0.43
CTDSP1-201ENST00000273062 CXXC4Q9H2H0 198 aa12.35□□□□□ -0.43
CTDSP1-201ENST00000273062 GP9P14770 177 aa12.35□□□□□ -0.43
CTDSP1-201ENST00000273062 TTC32Q5I0X7 151 aa12.35□□□□□ -0.43
CTDSP1-201ENST00000273062 DPM2O94777 84 aa12.34□□□□□ -0.43
CTDSP1-201ENST00000273062 TAL2Q16559 108 aa12.34□□□□□ -0.43
CTDSP1-201ENST00000273062 RPEQ96AT9 228 aa12.34□□□□□ -0.43
CTDSP1-201ENST00000273062 UPK2O00526 184 aa12.34□□□□□ -0.43
CTDSP1-201ENST00000273062 TCL1BO95988 128 aa12.34□□□□□ -0.43
CTDSP1-201ENST00000273062 CKS2P33552 79 aa12.34□□□□□ -0.43
CTDSP1-201ENST00000273062 NBL1P41271 181 aa12.34□□□□□ -0.43
CTDSP1-201ENST00000273062 OR1L8Q8NGR8 309 aa12.34□□□□□ -0.43
CTDSP1-201ENST00000273062 MAP1LC3AQ9H492 121 aa12.34□□□□□ -0.43
CTDSP1-201ENST00000273062 RAB9BQ9NP90 201 aa12.34□□□□□ -0.43
CTDSP1-201ENST00000273062 ADGRG4Q8IZF6 3080 aa12.33□□□□□ -0.44
CTDSP1-201ENST00000273062 HLA-DRB4P13762 266 aa12.33□□□□□ -0.44
CTDSP1-201ENST00000273062 C10orf55Q5SWW7 151 aa12.33□□□□□ -0.44
CTDSP1-201ENST00000273062 ASCL5Q7RTU5 278 aa12.33□□□□□ -0.44
CTDSP1-201ENST00000273062 HLA-DRB4X5D2U9 266 aa12.33□□□□□ -0.44
CTDSP1-201ENST00000273062 IGHV3OR15-7A0A075B7D8 119 aa12.32□□□□□ -0.44
CTDSP1-201ENST00000273062 SHISA9B4DS77 424 aa12.32□□□□□ -0.44
CTDSP1-201ENST00000273062 SNCGO76070 127 aa12.32□□□□□ -0.44
CTDSP1-201ENST00000273062 KIR2DS2P43631 304 aa12.32□□□□□ -0.44
CTDSP1-201ENST00000273062 CALYQ9NYX4 217 aa12.32□□□□□ -0.44
CTDSP1-201ENST00000273062 PLXNB1O43157 2135 aa12.32□□□□□ -0.44
CTDSP1-201ENST00000273062 RELNP78509 3460 aa12.32□□□□□ -0.44
CTDSP1-201ENST00000273062 FAM27E3Q08E93 113 aa12.32□□□□□ -0.44
CTDSP1-201ENST00000273062 NDUFA3O95167 84 aa12.31□□□□□ -0.44
CTDSP1-201ENST00000273062 PPP1R27Q86WC6 154 aa12.31□□□□□ -0.44
CTDSP1-201ENST00000273062 RASL10AQ92737 203 aa12.31□□□□□ -0.44
CTDSP1-201ENST00000273062 CTSZQ9UBR2 303 aa12.31□□□□□ -0.44
CTDSP1-201ENST00000273062 CSDC2Q9Y534 153 aaKnown RBP12.31□□□□□ -0.44
CTDSP1-201ENST00000273062 SAA1P0DJI8 122 aaPredicted RBP12.31□□□□□ -0.44
CTDSP1-201ENST00000273062 UBE2D3P61077 147 aa12.31□□□□□ -0.44
CTDSP1-201ENST00000273062 UBE2D2P62837 147 aa12.31□□□□□ -0.44
CTDSP1-201ENST00000273062 FAM201AQ5SY85 155 aa12.31□□□□□ -0.44
CTDSP1-201ENST00000273062 IGHV3-21A0A0B4J1V1 117 aa12.3□□□□□ -0.44
CTDSP1-201ENST00000273062 TRAV8-2A0A0B4J237 113 aa12.3□□□□□ -0.44
CTDSP1-201ENST00000273062 GATA1P15976 413 aaPredicted RBP12.3□□□□□ -0.44
CTDSP1-201ENST00000273062 C8orf49Q96NF6 230 aa12.3□□□□□ -0.44
CTDSP1-201ENST00000273062 PLCE1Q9P212 2302 aa12.3□□□□□ -0.44
CTDSP1-201ENST00000273062 A8MWV9 139 aa12.3□□□□□ -0.44
CTDSP1-201ENST00000273062 CUL9Q8IWT3 2517 aa12.3□□□□□ -0.44
CTDSP1-201ENST00000273062 DSCAML1Q8TD84 2053 aa12.3□□□□□ -0.44
CTDSP1-201ENST00000273062 MYMXA0A1B0GTQ4 84 aa12.29□□□□□ -0.44
CTDSP1-201ENST00000273062 SPRY3O43610 288 aa12.29□□□□□ -0.44
CTDSP1-201ENST00000273062 PF4V1P10720 104 aa12.29□□□□□ -0.44
CTDSP1-201ENST00000273062 WT1-ASQ06250 92 aa12.29□□□□□ -0.44
CTDSP1-201ENST00000273062 TWIST1Q15672 202 aa12.29□□□□□ -0.44
CTDSP1-201ENST00000273062 RAXQ9Y2V3 346 aa12.29□□□□□ -0.44
CTDSP1-201ENST00000273062 KALRNO60229 2985 aa12.29□□□□□ -0.44
CTDSP1-201ENST00000273062 IGKV1D-17A0A075B6S4 117 aa12.29□□□□□ -0.44
CTDSP1-201ENST00000273062 FCN3O75636 299 aa12.29□□□□□ -0.44
CTDSP1-201ENST00000273062 C3orf36Q3SXR2 165 aa12.29□□□□□ -0.44
CTDSP1-201ENST00000273062 C17orf77Q96MU5 243 aa12.29□□□□□ -0.44
CTDSP1-201ENST00000273062 RASL11BQ9BPW5 248 aa12.29□□□□□ -0.44
CTDSP1-201ENST00000273062 MSRB1Q9NZV6 116 aa12.29□□□□□ -0.44
CTDSP1-201ENST00000273062 PCNX1Q96RV3 2341 aa12.29□□□□□ -0.44
CTDSP1-201ENST00000273062 TMEM262E9PQX1 116 aa12.28□□□□□ -0.44
CTDSP1-201ENST00000273062 CRIP2P52943 208 aaPredicted RBP12.28□□□□□ -0.44
CTDSP1-201ENST00000273062 ZNRF1Q8ND25 227 aa12.28□□□□□ -0.44
CTDSP1-201ENST00000273062 PRR7Q8TB68 274 aa12.28□□□□□ -0.44
CTDSP1-201ENST00000273062 ROS1P08922 2347 aa12.28□□□□□ -0.44
CTDSP1-201ENST00000273062 LOC107984640A0A0U1RRK4 108 aa12.28□□□□□ -0.44
CTDSP1-201ENST00000273062 FOXC1Q12948 553 aa12.28□□□□□ -0.44
CTDSP1-201ENST00000273062 HOXB4P17483 251 aaPredicted RBP12.27□□□□□ -0.44
CTDSP1-201ENST00000273062 PRDX2P32119 198 aa12.27□□□□□ -0.44
CTDSP1-201ENST00000273062 POU2AF1Q16633 256 aa12.27□□□□□ -0.44
CTDSP1-201ENST00000273062 DUX4L9Q6RFH8 374 aaPredicted RBP12.27□□□□□ -0.44
CTDSP1-201ENST00000273062 SBSPONQ8IVN8 264 aa12.27□□□□□ -0.44
CTDSP1-201ENST00000273062 PRR30Q53SZ7 412 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms