RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 TRAV40A0A0B4J280 105 aa8.52□□□□□ -1.05
MSH3-201ENST00000265081 SNAI2O43623 268 aa8.52□□□□□ -1.05
MSH3-201ENST00000265081 NTF3P20783 257 aa8.52□□□□□ -1.05
MSH3-201ENST00000265081 LINC00173Q6ZV60 143 aa8.52□□□□□ -1.05
MSH3-201ENST00000265081 FABP5P3A8MUU1 101 aa8.52□□□□□ -1.05
MSH3-201ENST00000265081 FSHBP01225 129 aa8.52□□□□□ -1.05
MSH3-201ENST00000265081 MRPL51Q4U2R6 128 aaKnown RBP8.52□□□□□ -1.05
MSH3-201ENST00000265081 KLHDC1Q8N7A1 406 aa8.52□□□□□ -1.05
MSH3-201ENST00000265081 FER1L6-AS1Q8NA97 138 aa8.52□□□□□ -1.05
MSH3-201ENST00000265081 Q8TAT8 98 aa8.52□□□□□ -1.05
MSH3-201ENST00000265081 IGHV7-4-1A0A0J9YVY3 117 aa8.51□□□□□ -1.05
MSH3-201ENST00000265081 TMEM213A2RRL7 107 aa8.51□□□□□ -1.05
MSH3-201ENST00000265081 TMEM219Q86XT9 240 aa8.51□□□□□ -1.05
MSH3-201ENST00000265081 AGPAT4-IT1Q9H0P7 198 aa8.51□□□□□ -1.05
MSH3-201ENST00000265081 IGKV3D-20A0A0C4DH25 116 aa8.51□□□□□ -1.05
MSH3-201ENST00000265081 TRBV7-9A0A0J9YWB2 115 aa8.51□□□□□ -1.05
MSH3-201ENST00000265081 CLEC2AQ6UVW9 174 aa8.51□□□□□ -1.05
MSH3-201ENST00000265081 C9orf139Q6ZV77 190 aa8.51□□□□□ -1.05
MSH3-201ENST00000265081 IL17RELQ6ZVW7 336 aa8.51□□□□□ -1.05
MSH3-201ENST00000265081 DPF1Q92782 380 aa8.51□□□□□ -1.05
MSH3-201ENST00000265081 ZNF747Q9BV97 191 aa8.51□□□□□ -1.05
MSH3-201ENST00000265081 ST20Q9HBF5 79 aa8.51□□□□□ -1.05
MSH3-201ENST00000265081 LEPROTL1O95214 131 aa8.51□□□□□ -1.05
MSH3-201ENST00000265081 C11orf21Q9P2W6 132 aa8.51□□□□□ -1.05
MSH3-201ENST00000265081 TMEM89A2RUT3 159 aa8.5□□□□□ -1.05
MSH3-201ENST00000265081 IGLL1P15814 213 aa8.5□□□□□ -1.05
MSH3-201ENST00000265081 ERCC8Q13216 396 aa8.5□□□□□ -1.05
MSH3-201ENST00000265081 MAJINQ3KP22 176 aa8.5□□□□□ -1.05
MSH3-201ENST00000265081 IGFL4Q6B9Z1 124 aa8.5□□□□□ -1.05
MSH3-201ENST00000265081 RNF182Q8N6D2 247 aa8.5□□□□□ -1.05
MSH3-201ENST00000265081 SIGLEC8Q9NYZ4 499 aa8.5□□□□□ -1.05
MSH3-201ENST00000265081 HSPB8Q9UJY1 196 aa8.5□□□□□ -1.05
MSH3-201ENST00000265081 ZNF138P52744 262 aa8.5□□□□□ -1.05
MSH3-201ENST00000265081 ATRXP46100 2492 aa8.5□□□□□ -1.05
MSH3-201ENST00000265081 D6R8Y8 96 aa8.5□□□□□ -1.05
MSH3-201ENST00000265081 PRR31Q5SQ13 230 aa8.5□□□□□ -1.05
MSH3-201ENST00000265081 ORMDL3Q8N138 153 aa8.5□□□□□ -1.05
MSH3-201ENST00000265081 C20orf173Q96LM9 149 aa8.5□□□□□ -1.05
MSH3-201ENST00000265081 BRD3OSQ6XYD6 125 aa8.49□□□□□ -1.05
MSH3-201ENST00000265081 SLC25A16P16260 332 aa8.49□□□□□ -1.05
MSH3-201ENST00000265081 GAGE1Q13065 139 aa8.49□□□□□ -1.05
MSH3-201ENST00000265081 AKAP9Q99996 3911 aa8.49□□□□□ -1.05
MSH3-201ENST00000265081 CFAP46Q8IYW2 2715 aa8.49□□□□□ -1.05
MSH3-201ENST00000265081 B4DSR2 109 aa8.49□□□□□ -1.05
MSH3-201ENST00000265081 AVPP01185 164 aa8.49□□□□□ -1.05
MSH3-201ENST00000265081 TSPOP30536 169 aa8.49□□□□□ -1.05
MSH3-201ENST00000265081 ARL3P36405 182 aa8.49□□□□□ -1.05
MSH3-201ENST00000265081 AMN1Q8IY45 258 aa8.49□□□□□ -1.05
MSH3-201ENST00000265081 SCRT2Q9NQ03 307 aa8.49□□□□□ -1.05
MSH3-201ENST00000265081 AP5S1Q9NUS5 200 aa8.49□□□□□ -1.05
MSH3-201ENST00000265081 CELSR1Q9NYQ6 3014 aa8.49□□□□□ -1.05
MSH3-201ENST00000265081 IGLV2-18A0A075B6J9 118 aa8.49□□□□□ -1.05
MSH3-201ENST00000265081 SMAD7O15105 426 aaKnown RBP8.49□□□□□ -1.05
MSH3-201ENST00000265081 PPBPP02775 128 aa8.49□□□□□ -1.05
MSH3-201ENST00000265081 UNQ9165/PRO28630Q6UXU0 137 aa8.49□□□□□ -1.05
MSH3-201ENST00000265081 ZNF705AQ6ZN79 300 aaPredicted RBP8.49□□□□□ -1.05
MSH3-201ENST00000265081 J3QLI3 93 aa8.48□□□□□ -1.05
MSH3-201ENST00000265081 TRGV3P03979 118 aa8.48□□□□□ -1.05
MSH3-201ENST00000265081 MYOZ3Q8TDC0 251 aa8.48□□□□□ -1.05
MSH3-201ENST00000265081 MS4A6AQ9H2W1 248 aa8.48□□□□□ -1.05
MSH3-201ENST00000265081 K7EMT4 169 aa8.48□□□□□ -1.05
MSH3-201ENST00000265081 TRBV12-3P01733 135 aa8.48□□□□□ -1.05
MSH3-201ENST00000265081 RPLP1P05386 114 aaKnown RBP8.48□□□□□ -1.05
MSH3-201ENST00000265081 PRELID3AQ96N28 172 aa8.48□□□□□ -1.05
MSH3-201ENST00000265081 OR4C46A6NHA9 309 aa8.48□□□□□ -1.05
MSH3-201ENST00000265081 IFI27P40305 119 aaPredicted RBP8.48□□□□□ -1.05
MSH3-201ENST00000265081 ATP5J2P56134 94 aa8.48□□□□□ -1.05
MSH3-201ENST00000265081 POM121L12Q8N7R1 296 aa8.48□□□□□ -1.05
MSH3-201ENST00000265081 MAP1LC3CQ9BXW4 147 aa8.48□□□□□ -1.05
MSH3-201ENST00000265081 MED14OSP0DP75 135 aa8.47□□□□□ -1.05
MSH3-201ENST00000265081 KIR3DS1Q14943 382 aa8.47□□□□□ -1.05
MSH3-201ENST00000265081 FAM106AQ4KMX7 169 aa8.47□□□□□ -1.05
MSH3-201ENST00000265081 OR10AG1Q8NH19 301 aa8.47□□□□□ -1.05
MSH3-201ENST00000265081 IGHV3OR16-8A0A075B7F1 116 aa8.47□□□□□ -1.05
MSH3-201ENST00000265081 PSMB8P28062 276 aa8.47□□□□□ -1.05
MSH3-201ENST00000265081 IGHV3-35A0A0C4DH35 117 aa8.47□□□□□ -1.05
MSH3-201ENST00000265081 H3BUX3 64 aa8.47□□□□□ -1.05
MSH3-201ENST00000265081 PRB4P10163 310 aaPredicted RBP8.47□□□□□ -1.05
MSH3-201ENST00000265081 LOXL1Q08397 574 aaPredicted RBP8.47□□□□□ -1.05
MSH3-201ENST00000265081 ZFAND2AQ8N6M9 145 aa8.47□□□□□ -1.05
MSH3-201ENST00000265081 UBR5O95071 2799 aaPredicted RBP8.47□□□□□ -1.05
MSH3-201ENST00000265081 PRR9Q5T870 116 aa8.46□□□□□ -1.05
MSH3-201ENST00000265081 LINC00477Q96M19 166 aa8.46□□□□□ -1.05
MSH3-201ENST00000265081 SRSF1Q07955 248 aaKnown RBP eCLIP8.46□□□□□ -1.06
MSH3-201ENST00000265081 LGALS9BQ3B8N2 356 aa8.46□□□□□ -1.06
MSH3-201ENST00000265081 LGALS9CQ6DKI2 356 aa8.46□□□□□ -1.06
MSH3-201ENST00000265081 Q6ZS46 218 aa8.46□□□□□ -1.06
MSH3-201ENST00000265081 IGHV3OR16-10A0A075B7F0 116 aa8.46□□□□□ -1.06
MSH3-201ENST00000265081 OVOL1O14753 267 aa8.46□□□□□ -1.06
MSH3-201ENST00000265081 NPYP01303 97 aa8.46□□□□□ -1.06
MSH3-201ENST00000265081 SPTBN4Q9H254 2564 aa8.45□□□□□ -1.06
MSH3-201ENST00000265081 NXPH4O95158 308 aa8.45□□□□□ -1.06
MSH3-201ENST00000265081 RNF152Q8N8N0 203 aa8.45□□□□□ -1.06
MSH3-201ENST00000265081 CACNG7P62955 275 aa8.45□□□□□ -1.06
MSH3-201ENST00000265081 TMEM78Q5T7P6 136 aa8.45□□□□□ -1.06
MSH3-201ENST00000265081 ATOH7Q8N100 152 aa8.45□□□□□ -1.06
MSH3-201ENST00000265081 LINC01356Q8N9X3 169 aa8.45□□□□□ -1.06
MSH3-201ENST00000265081 ZMAT4Q9H898 229 aa8.45□□□□□ -1.06
MSH3-201ENST00000265081 CELSR2Q9HCU4 2923 aa8.45□□□□□ -1.06
MSH3-201ENST00000265081 TCF21O43680 179 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms