RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 LINC00310P59036 64 aa15.67■□□□□ 0.1
CSPG5-201ENST00000264723 PET117Q6UWS5 81 aa15.67■□□□□ 0.1
CSPG5-201ENST00000264723 SCGB1D4Q6XE38 83 aa15.67■□□□□ 0.1
CSPG5-201ENST00000264723 RNASE4P34096 147 aaKnown RBP15.67■□□□□ 0.1
CSPG5-201ENST00000264723 ZNF502Q8TBZ5 544 aa15.67■□□□□ 0.1
CSPG5-201ENST00000264723 ST20Q9HBF5 79 aa15.67■□□□□ 0.1
CSPG5-201ENST00000264723 TET2Q6N021 2002 aaPredicted RBP15.67■□□□□ 0.1
CSPG5-201ENST00000264723 ADAMTS20P59510 1910 aa15.66■□□□□ 0.1
CSPG5-201ENST00000264723 IFI27L1Q96BM0 104 aa15.66■□□□□ 0.1
CSPG5-201ENST00000264723 OOSP1A8MZH6 123 aa15.66■□□□□ 0.1
CSPG5-201ENST00000264723 FAM159AQ6UWV7 190 aa15.66■□□□□ 0.1
CSPG5-201ENST00000264723 PRSS57Q6UWY2 283 aa15.66■□□□□ 0.1
CSPG5-201ENST00000264723 NRGNQ92686 78 aa15.65■□□□□ 0.1
CSPG5-201ENST00000264723 ZNF462Q96JM2 2506 aa15.65■□□□□ 0.1
CSPG5-201ENST00000264723 SFTA2Q6UW10 78 aa15.65■□□□□ 0.1
CSPG5-201ENST00000264723 DSCAML1Q8TD84 2053 aa15.65■□□□□ 0.1
CSPG5-201ENST00000264723 SPRY2O43597 315 aa15.65■□□□□ 0.1
CSPG5-201ENST00000264723 UBE2E1P51965 193 aa15.65■□□□□ 0.1
CSPG5-201ENST00000264723 PKD1L2Q7Z442 2459 aa15.64■□□□□ 0.09
CSPG5-201ENST00000264723 B4DSR2 109 aa15.64■□□□□ 0.09
CSPG5-201ENST00000264723 GP9P14770 177 aa15.64■□□□□ 0.09
CSPG5-201ENST00000264723 ZNF491Q8N8L2 437 aa15.64■□□□□ 0.09
CSPG5-201ENST00000264723 HBDP02042 147 aa15.64■□□□□ 0.09
CSPG5-201ENST00000264723 COX11Q9Y6N1 276 aa15.64■□□□□ 0.09
CSPG5-201ENST00000264723 DGAT2L7PQ6IED9 249 aa15.63■□□□□ 0.09
CSPG5-201ENST00000264723 NPFFR1Q9GZQ6 430 aa15.63■□□□□ 0.09
CSPG5-201ENST00000264723 NDUFA3O95167 84 aa15.63■□□□□ 0.09
CSPG5-201ENST00000264723 IGHV2-70DA0A0C4DH43 119 aa15.63■□□□□ 0.09
CSPG5-201ENST00000264723 VGLL1Q99990 258 aa15.63■□□□□ 0.09
CSPG5-201ENST00000264723 LOC400499M0QZD8 3231 aa15.63■□□□□ 0.09
CSPG5-201ENST00000264723 RNF223E7ERA6 249 aa15.63■□□□□ 0.09
CSPG5-201ENST00000264723 K7ERU9 68 aa15.62■□□□□ 0.09
CSPG5-201ENST00000264723 LTAP01374 205 aa15.62■□□□□ 0.09
CSPG5-201ENST00000264723 SNRPD3P62318 126 aaKnown RBP15.62■□□□□ 0.09
CSPG5-201ENST00000264723 UBE2V1Q13404 147 aa15.62■□□□□ 0.09
CSPG5-201ENST00000264723 SRSF9Q13242 221 aaKnown RBP eCLIP15.62■□□□□ 0.09
CSPG5-201ENST00000264723 PEF1Q9UBV8 284 aaKnown RBP15.62■□□□□ 0.09
CSPG5-201ENST00000264723 COTL1Q14019 142 aa15.61■□□□□ 0.09
CSPG5-201ENST00000264723 Q6AWC8 147 aa15.61■□□□□ 0.09
CSPG5-201ENST00000264723 PCSK5Q92824 1860 aa15.61■□□□□ 0.09
CSPG5-201ENST00000264723 SIGLEC15Q6ZMC9 328 aa15.61■□□□□ 0.09
CSPG5-201ENST00000264723 GTSCR1Q86UQ5 136 aa15.61■□□□□ 0.09
CSPG5-201ENST00000264723 BCL6BQ8N143 479 aaPredicted RBP15.61■□□□□ 0.09
CSPG5-201ENST00000264723 MAP1AP78559 2803 aaPredicted RBP15.61■□□□□ 0.09
CSPG5-201ENST00000264723 FN1P02751 2386 aaKnown RBP15.6■□□□□ 0.09
CSPG5-201ENST00000264723 H3BVH4 76 aa15.6■□□□□ 0.09
CSPG5-201ENST00000264723 ZNF688P0C7X2 276 aa15.6■□□□□ 0.09
CSPG5-201ENST00000264723 SLC50A1Q9BRV3 221 aa15.6■□□□□ 0.09
CSPG5-201ENST00000264723 OR4X2Q8NGF9 303 aa15.6■□□□□ 0.09
CSPG5-201ENST00000264723 MRPS16Q9Y3D3 137 aaKnown RBP15.6■□□□□ 0.09
CSPG5-201ENST00000264723 HIST1H4GQ99525 98 aa15.6■□□□□ 0.09
CSPG5-201ENST00000264723 ZNF492Q9P255 531 aa15.6■□□□□ 0.09
CSPG5-201ENST00000264723 K7EIM0 57 aa15.59■□□□□ 0.09
CSPG5-201ENST00000264723 OVOL3O00110 214 aa15.59■□□□□ 0.09
CSPG5-201ENST00000264723 MSRB1Q9NZV6 116 aa15.59■□□□□ 0.09
CSPG5-201ENST00000264723 ZNF56Q15929 161 aa15.59■□□□□ 0.09
CSPG5-201ENST00000264723 IGLV1-47P01700 117 aa15.59■□□□□ 0.09
CSPG5-201ENST00000264723 MSMBP08118 114 aa15.59■□□□□ 0.09
CSPG5-201ENST00000264723 ZFP36P26651 326 aaKnown RBP15.58■□□□□ 0.09
CSPG5-201ENST00000264723 ARL6IP6Q8N6S5 226 aa15.58■□□□□ 0.09
CSPG5-201ENST00000264723 CENPEQ02224 2701 aa15.58■□□□□ 0.09
CSPG5-201ENST00000264723 FABP2P12104 132 aa15.58■□□□□ 0.08
CSPG5-201ENST00000264723 Q71RC1 249 aaPredicted RBP15.58■□□□□ 0.08
CSPG5-201ENST00000264723 CCL25O15444 150 aa15.58■□□□□ 0.08
CSPG5-201ENST00000264723 ASIPP42127 132 aa15.58■□□□□ 0.08
CSPG5-201ENST00000264723 NHP2Q9NX24 153 aaKnown RBP15.58■□□□□ 0.08
CSPG5-201ENST00000264723 SIGLEC8Q9NYZ4 499 aa15.58■□□□□ 0.08
CSPG5-201ENST00000264723 TEX22C9J3V5 150 aa15.57■□□□□ 0.08
CSPG5-201ENST00000264723 I3L2K1 104 aa15.57■□□□□ 0.08
CSPG5-201ENST00000264723 IGHV1-69DA0A0B4J2H0 117 aa15.57■□□□□ 0.08
CSPG5-201ENST00000264723 IGHV1-69P01742 117 aa15.57■□□□□ 0.08
CSPG5-201ENST00000264723 IGHV4-61A0A0C4DH41 118 aa15.57■□□□□ 0.08
CSPG5-201ENST00000264723 GATA1P15976 413 aaPredicted RBP15.57■□□□□ 0.08
CSPG5-201ENST00000264723 PLP1P60201 277 aa15.57■□□□□ 0.08
CSPG5-201ENST00000264723 ITLN2Q8WWU7 325 aaPredicted RBP15.57■□□□□ 0.08
CSPG5-201ENST00000264723 TRAV26-2A0A0B4J265 109 aa15.56■□□□□ 0.08
CSPG5-201ENST00000264723 VWC2LB2RUY7 222 aa15.56■□□□□ 0.08
CSPG5-201ENST00000264723 MRPL51Q4U2R6 128 aaKnown RBP15.56■□□□□ 0.08
CSPG5-201ENST00000264723 PSMG4Q5JS54 123 aa15.56■□□□□ 0.08
CSPG5-201ENST00000264723 PRSS22Q9GZN4 317 aa15.56■□□□□ 0.08
CSPG5-201ENST00000264723 A0A1B0GW15 77 aa15.56■□□□□ 0.08
CSPG5-201ENST00000264723 H3BRN7 92 aa15.56■□□□□ 0.08
CSPG5-201ENST00000264723 NPYP01303 97 aa15.56■□□□□ 0.08
CSPG5-201ENST00000264723 CD7P09564 240 aa15.56■□□□□ 0.08
CSPG5-201ENST00000264723 ESDP10768 282 aa15.56■□□□□ 0.08
CSPG5-201ENST00000264723 MUC3AQ02505 3323 aa15.56■□□□□ 0.08
CSPG5-201ENST00000264723 SCGB1C2P0DMR2 95 aa15.56■□□□□ 0.08
CSPG5-201ENST00000264723 WIPF2Q8TF74 440 aaPredicted RBP15.56■□□□□ 0.08
CSPG5-201ENST00000264723 ORAOV1Q8WV07 137 aa15.56■□□□□ 0.08
CSPG5-201ENST00000264723 BEX4Q9NWD9 120 aaPredicted RBP15.56■□□□□ 0.08
CSPG5-201ENST00000264723 IL17RELQ6ZVW7 336 aa15.55■□□□□ 0.08
CSPG5-201ENST00000264723 PRR25Q96S07 402 aa15.55■□□□□ 0.08
CSPG5-201ENST00000264723 GFRA4Q9GZZ7 299 aa15.55■□□□□ 0.08
CSPG5-201ENST00000264723 FCN3O75636 299 aa15.55■□□□□ 0.08
CSPG5-201ENST00000264723 RIPPLY3P57055 190 aa15.55■□□□□ 0.08
CSPG5-201ENST00000264723 CDSNQ15517 529 aa15.55■□□□□ 0.08
CSPG5-201ENST00000264723 CT83Q5H943 113 aa15.55■□□□□ 0.08
CSPG5-201ENST00000264723 FAM104BQ5XKR9 115 aa15.55■□□□□ 0.08
CSPG5-201ENST00000264723 YAE1D1Q9NRH1 226 aa15.55■□□□□ 0.08
CSPG5-201ENST00000264723 JKAMPQ9P055 326 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms