RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 MYMXA0A1B0GTQ4 84 aa12.03□□□□□ -0.48
CASC3-201ENST00000264645 PRADC1Q9BSG0 188 aa12.03□□□□□ -0.48
CASC3-201ENST00000264645 NAV3Q8IVL0 2385 aa12.03□□□□□ -0.48
CASC3-201ENST00000264645 CEACAM4O75871 244 aa12.03□□□□□ -0.48
CASC3-201ENST00000264645 TTC28Q96AY4 2481 aa12.02□□□□□ -0.48
CASC3-201ENST00000264645 IGKV3D-20A0A0C4DH25 116 aa12.02□□□□□ -0.48
CASC3-201ENST00000264645 PROP1O75360 226 aa12.02□□□□□ -0.48
CASC3-201ENST00000264645 DNAL4O96015 105 aa12.02□□□□□ -0.48
CASC3-201ENST00000264645 HLA-DRB4P13762 266 aa12.02□□□□□ -0.48
CASC3-201ENST00000264645 GATA1P15976 413 aaPredicted RBP12.02□□□□□ -0.48
CASC3-201ENST00000264645 PRR25Q96S07 402 aa12.02□□□□□ -0.48
CASC3-201ENST00000264645 PLSCR4Q9NRQ2 329 aa12.02□□□□□ -0.48
CASC3-201ENST00000264645 HLA-DRB4X5D2U9 266 aa12.02□□□□□ -0.48
CASC3-201ENST00000264645 C3orf36Q3SXR2 165 aa12.02□□□□□ -0.49
CASC3-201ENST00000264645 LYPD2Q6UXB3 125 aa12.02□□□□□ -0.49
CASC3-201ENST00000264645 Q8N8P6 123 aa12.02□□□□□ -0.49
CASC3-201ENST00000264645 SUMO2P61956 95 aaKnown RBP12.01□□□□□ -0.49
CASC3-201ENST00000264645 Q8N976 141 aa12.01□□□□□ -0.49
CASC3-201ENST00000264645 TANC2Q9HCD6 1990 aa12.01□□□□□ -0.49
CASC3-201ENST00000264645 PRSS47A8MTI9 375 aa12.01□□□□□ -0.49
CASC3-201ENST00000264645 LOXL1Q08397 574 aaPredicted RBP12.01□□□□□ -0.49
CASC3-201ENST00000264645 GAGE5Q13069 117 aa12.01□□□□□ -0.49
CASC3-201ENST00000264645 GAGE6Q13070 117 aa12.01□□□□□ -0.49
CASC3-201ENST00000264645 ZNF474Q6S9Z5 364 aaPredicted RBP12.01□□□□□ -0.49
CASC3-201ENST00000264645 LINC00322Q6ZN03 302 aaPredicted RBP12.01□□□□□ -0.49
CASC3-201ENST00000264645 TRAV21A0A0B4J279 112 aa12.01□□□□□ -0.49
CASC3-201ENST00000264645 THAP8Q8NA92 274 aa12.01□□□□□ -0.49
CASC3-201ENST00000264645 C1QTNF4Q9BXJ3 329 aa12.01□□□□□ -0.49
CASC3-201ENST00000264645 F8VRH5 84 aa12.01□□□□□ -0.49
CASC3-201ENST00000264645 CDX4O14627 284 aaPredicted RBP12.01□□□□□ -0.49
CASC3-201ENST00000264645 FAM106AQ4KMX7 169 aa12.01□□□□□ -0.49
CASC3-201ENST00000264645 C2orf66Q6UXQ4 117 aa12.01□□□□□ -0.49
CASC3-201ENST00000264645 CD7P09564 240 aa12□□□□□ -0.49
CASC3-201ENST00000264645 DTX2Q86UW9 622 aa12□□□□□ -0.49
CASC3-201ENST00000264645 PDE6HQ13956 83 aa12□□□□□ -0.49
CASC3-201ENST00000264645 SMIM20Q8N5G0 67 aa12□□□□□ -0.49
CASC3-201ENST00000264645 HCFC1P51610 2035 aa12□□□□□ -0.49
CASC3-201ENST00000264645 ATRXP46100 2492 aa12□□□□□ -0.49
CASC3-201ENST00000264645 GAGE12JA6NER3 117 aa12□□□□□ -0.49
CASC3-201ENST00000264645 GAGE7O76087 117 aa12□□□□□ -0.49
CASC3-201ENST00000264645 TRGV3P03979 118 aa12□□□□□ -0.49
CASC3-201ENST00000264645 RNASE1P07998 156 aaKnown RBP12□□□□□ -0.49
CASC3-201ENST00000264645 GAGE12FP0CL80 117 aa12□□□□□ -0.49
CASC3-201ENST00000264645 GAGE12GP0CL81 117 aa12□□□□□ -0.49
CASC3-201ENST00000264645 GAGE12IP0CL82 117 aa12□□□□□ -0.49
CASC3-201ENST00000264645 GAGE4Q13068 117 aa12□□□□□ -0.49
CASC3-201ENST00000264645 DEFB123Q8N688 67 aa12□□□□□ -0.49
CASC3-201ENST00000264645 MSRB1Q9NZV6 116 aa12□□□□□ -0.49
CASC3-201ENST00000264645 A0A1B0GXF2 115 aa11.99□□□□□ -0.49
CASC3-201ENST00000264645 TAL2Q16559 108 aa11.99□□□□□ -0.49
CASC3-201ENST00000264645 RNF182Q8N6D2 247 aa11.99□□□□□ -0.49
CASC3-201ENST00000264645 MDS2Q8NDY4 140 aa11.99□□□□□ -0.49
CASC3-201ENST00000264645 PRSS29PA6NIE9 313 aa11.99□□□□□ -0.49
CASC3-201ENST00000264645 ZNF833PQ6ZTB9 187 aa11.99□□□□□ -0.49
CASC3-201ENST00000264645 C8orf86Q6ZUL3 223 aa11.99□□□□□ -0.49
CASC3-201ENST00000264645 SPAG8Q99932 426 aaPredicted RBP11.99□□□□□ -0.49
CASC3-201ENST00000264645 BDP1A6H8Y1 2624 aa11.99□□□□□ -0.49
CASC3-201ENST00000264645 ZNF688P0C7X2 276 aa11.99□□□□□ -0.49
CASC3-201ENST00000264645 C15orf32Q32M92 178 aa11.99□□□□□ -0.49
CASC3-201ENST00000264645 OR11H6Q8NGC7 330 aa11.99□□□□□ -0.49
CASC3-201ENST00000264645 C20orf78Q9BR46 151 aa11.99□□□□□ -0.49
CASC3-201ENST00000264645 TMEM178BH3BS89 294 aa11.98□□□□□ -0.49
CASC3-201ENST00000264645 RNASE6Q93091 150 aaKnown RBP11.98□□□□□ -0.49
CASC3-201ENST00000264645 MRPL36Q9P0J6 103 aaKnown RBP11.98□□□□□ -0.49
CASC3-201ENST00000264645 IGHV3-11P01762 117 aa11.98□□□□□ -0.49
CASC3-201ENST00000264645 EGR2P11161 476 aaPredicted RBP11.98□□□□□ -0.49
CASC3-201ENST00000264645 ATXN8Q156A1 80 aa11.98□□□□□ -0.49
CASC3-201ENST00000264645 IGHV3OR16-10A0A075B7F0 116 aa11.98□□□□□ -0.49
CASC3-201ENST00000264645 B9A039 149 aa11.98□□□□□ -0.49
CASC3-201ENST00000264645 M0R2P5 195 aa11.98□□□□□ -0.49
CASC3-201ENST00000264645 LINC01560Q8TB33 94 aa11.98□□□□□ -0.49
CASC3-201ENST00000264645 DDB2Q92466 427 aa11.98□□□□□ -0.49
CASC3-201ENST00000264645 DPH3P1Q9H4G8 78 aa11.98□□□□□ -0.49
CASC3-201ENST00000264645 APOBEC3AP31941 199 aaPredicted RBP11.97□□□□□ -0.49
CASC3-201ENST00000264645 NDPQ00604 133 aa11.97□□□□□ -0.49
CASC3-201ENST00000264645 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.97□□□□□ -0.49
CASC3-201ENST00000264645 C22orf46C9J442 243 aa11.97□□□□□ -0.49
CASC3-201ENST00000264645 SLC25A20O43772 301 aa11.97□□□□□ -0.49
CASC3-201ENST00000264645 TMEM14CQ9P0S9 112 aa11.97□□□□□ -0.49
CASC3-201ENST00000264645 WNK1Q9H4A3 2382 aa11.97□□□□□ -0.49
CASC3-201ENST00000264645 IFITM1P13164 125 aa11.97□□□□□ -0.49
CASC3-201ENST00000264645 CLUHP3Q96NS8 147 aa11.97□□□□□ -0.49
CASC3-201ENST00000264645 LINC00527Q9UJ94 153 aa11.97□□□□□ -0.49
CASC3-201ENST00000264645 LY6G6EA0A0G2JKS1 128 aa11.96□□□□□ -0.49
CASC3-201ENST00000264645 GP9P14770 177 aa11.96□□□□□ -0.49
CASC3-201ENST00000264645 C19orf54Q5BKX5 351 aa11.96□□□□□ -0.49
CASC3-201ENST00000264645 IL17RELQ6ZVW7 336 aa11.96□□□□□ -0.49
CASC3-201ENST00000264645 MBD6Q96DN6 1003 aa11.96□□□□□ -0.49
CASC3-201ENST00000264645 U3KQA8 63 aa11.96□□□□□ -0.49
CASC3-201ENST00000264645 TRAV8-3A0A0A6YYJ7 113 aa11.96□□□□□ -0.49
CASC3-201ENST00000264645 TCF15Q12870 199 aa11.96□□□□□ -0.49
CASC3-201ENST00000264645 LY6EQ16553 131 aa11.96□□□□□ -0.49
CASC3-201ENST00000264645 E7EUB6 86 aa11.96□□□□□ -0.5
CASC3-201ENST00000264645 FGF6P10767 208 aa11.96□□□□□ -0.5
CASC3-201ENST00000264645 PTH2Q96A98 100 aa11.96□□□□□ -0.5
CASC3-201ENST00000264645 CITED1Q99966 193 aa11.96□□□□□ -0.5
CASC3-201ENST00000264645 TNFRSF18Q9Y5U5 241 aa11.96□□□□□ -0.5
CASC3-201ENST00000264645 IGKV3OR2-268A0A0C4DH90 116 aa11.96□□□□□ -0.5
CASC3-201ENST00000264645 NTN5Q8WTR8 489 aaPredicted RBP11.96□□□□□ -0.5
CASC3-201ENST00000264645 TMEM190Q8WZ59 177 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms