RNA–Protein interactions for RNA: ENST00000263966.7

USP13-201, Transcript of ubiquitin specific peptidase 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP13, Length 8,323 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-201ENST00000263966 NDUFA4O00483 81 aa13.39□□□□□ -0.27
USP13-201ENST00000263966 UBE2AP49459 152 aa13.39□□□□□ -0.27
USP13-201ENST00000263966 CFHR2P36980 270 aa13.39□□□□□ -0.27
USP13-201ENST00000263966 C1QL4Q86Z23 238 aa13.39□□□□□ -0.27
USP13-201ENST00000263966 PAQR4Q8N4S7 273 aaPredicted RBP13.39□□□□□ -0.27
USP13-201ENST00000263966 OCC1Q8TAD7 63 aa13.39□□□□□ -0.27
USP13-201ENST00000263966 MRPL36Q9P0J6 103 aaKnown RBP13.39□□□□□ -0.27
USP13-201ENST00000263966 KLF2Q9Y5W3 355 aaPredicted RBP13.39□□□□□ -0.27
USP13-201ENST00000263966 KIAA1549LQ6ZVL6 1849 aa13.38□□□□□ -0.27
USP13-201ENST00000263966 IGHV1OR15-1A0A075B7D0 117 aa13.38□□□□□ -0.27
USP13-201ENST00000263966 WISP3O95389 354 aaPredicted RBP13.38□□□□□ -0.27
USP13-201ENST00000263966 TMEM14BQ9NUH8 114 aa13.38□□□□□ -0.27
USP13-201ENST00000263966 DEFB104AQ8WTQ1 72 aa13.38□□□□□ -0.27
USP13-201ENST00000263966 MYO18BQ8IUG5 2567 aa13.38□□□□□ -0.27
USP13-201ENST00000263966 C1QTNF9P0C862 333 aa13.38□□□□□ -0.27
USP13-201ENST00000263966 ATP6V0BQ99437 205 aa13.38□□□□□ -0.27
USP13-201ENST00000263966 TECTAO75443 2155 aa13.38□□□□□ -0.27
USP13-201ENST00000263966 MRPL27Q9P0M9 148 aaKnown RBP13.38□□□□□ -0.27
USP13-201ENST00000263966 COL8A2P25067 703 aa13.37□□□□□ -0.27
USP13-201ENST00000263966 TIMM17AQ99595 171 aa13.37□□□□□ -0.27
USP13-201ENST00000263966 NBL1P41271 181 aa13.37□□□□□ -0.27
USP13-201ENST00000263966 ZNRF2Q8NHG8 242 aa13.37□□□□□ -0.27
USP13-201ENST00000263966 E7EQL1 145 aa13.37□□□□□ -0.27
USP13-201ENST00000263966 TRBV20-1A0A075B6N2 111 aa13.37□□□□□ -0.27
USP13-201ENST00000263966 IGKV1D-43A0A0B4J1Z2 117 aa13.37□□□□□ -0.27
USP13-201ENST00000263966 TREML4Q6UXN2 200 aa13.37□□□□□ -0.27
USP13-201ENST00000263966 ICOSQ9Y6W8 199 aa13.37□□□□□ -0.27
USP13-201ENST00000263966 SPART-AS1P0CW21 52 aa13.36□□□□□ -0.27
USP13-201ENST00000263966 GAFA1Q96PS6 74 aa13.36□□□□□ -0.27
USP13-201ENST00000263966 EXPH5Q8NEV8 1989 aa13.36□□□□□ -0.27
USP13-201ENST00000263966 IGKV1D-13A0A0B4J2D9 117 aa13.36□□□□□ -0.27
USP13-201ENST00000263966 IGKV1-13P0DP09 117 aa13.36□□□□□ -0.27
USP13-201ENST00000263966 HLA-DRB4P13762 266 aa13.36□□□□□ -0.27
USP13-201ENST00000263966 CLPSL2Q6UWE3 100 aa13.36□□□□□ -0.27
USP13-201ENST00000263966 HLA-DRB4X5D2U9 266 aa13.36□□□□□ -0.27
USP13-201ENST00000263966 ATP6V0E1O15342 81 aa13.36□□□□□ -0.27
USP13-201ENST00000263966 ZNF134P52741 427 aa13.36□□□□□ -0.27
USP13-201ENST00000263966 C9JAW5 83 aa13.35□□□□□ -0.27
USP13-201ENST00000263966 UTF1Q5T230 341 aa13.35□□□□□ -0.27
USP13-201ENST00000263966 GGNQ86UU5 652 aa13.35□□□□□ -0.27
USP13-201ENST00000263966 GFRA4Q9GZZ7 299 aa13.35□□□□□ -0.27
USP13-201ENST00000263966 TP53TG1Q9Y2A0 90 aa13.35□□□□□ -0.27
USP13-201ENST00000263966 ARMS2P0C7Q2 107 aa13.35□□□□□ -0.27
USP13-201ENST00000263966 GUSBP1Q15486 140 aa13.35□□□□□ -0.27
USP13-201ENST00000263966 CFHR4Q92496 578 aa13.34□□□□□ -0.27
USP13-201ENST00000263966 VPREB3Q9UKI3 123 aa13.34□□□□□ -0.27
USP13-201ENST00000263966 ELANEP08246 267 aa13.34□□□□□ -0.27
USP13-201ENST00000263966 NUP35Q8NFH5 326 aa13.34□□□□□ -0.27
USP13-201ENST00000263966 MRPL23Q16540 153 aaKnown RBP13.34□□□□□ -0.27
USP13-201ENST00000263966 RPP25LQ8N5L8 163 aaKnown RBP13.34□□□□□ -0.27
USP13-201ENST00000263966 KLK9Q9UKQ9 250 aa13.34□□□□□ -0.27
USP13-201ENST00000263966 NOTCH4Q99466 2003 aa13.34□□□□□ -0.27
USP13-201ENST00000263966 FOXG1P55316 489 aaPredicted RBP13.34□□□□□ -0.27
USP13-201ENST00000263966 PINLYPA6NC86 204 aa13.34□□□□□ -0.27
USP13-201ENST00000263966 TFF1P04155 84 aa13.34□□□□□ -0.27
USP13-201ENST00000263966 RNASE2P10153 161 aaKnown RBP13.34□□□□□ -0.27
USP13-201ENST00000263966 C14orf177Q52M58 125 aa13.34□□□□□ -0.27
USP13-201ENST00000263966 NXPH4O95158 308 aa13.33□□□□□ -0.27
USP13-201ENST00000263966 ZNF124Q15973 351 aa13.33□□□□□ -0.28
USP13-201ENST00000263966 C9orf153Q5TBE3 101 aa13.33□□□□□ -0.28
USP13-201ENST00000263966 CARHSP1Q9Y2V2 147 aaKnown RBP13.33□□□□□ -0.28
USP13-201ENST00000263966 LINC01551Q86U37 167 aa13.33□□□□□ -0.28
USP13-201ENST00000263966 IGKV1-39P01597 117 aa13.33□□□□□ -0.28
USP13-201ENST00000263966 IGKV1D-39P04432 117 aa13.33□□□□□ -0.28
USP13-201ENST00000263966 RNF152Q8N8N0 203 aa13.33□□□□□ -0.28
USP13-201ENST00000263966 GREM1O60565 184 aa13.32□□□□□ -0.28
USP13-201ENST00000263966 CSRP3P50461 194 aa13.32□□□□□ -0.28
USP13-201ENST00000263966 C10orf55Q5SWW7 151 aa13.32□□□□□ -0.28
USP13-201ENST00000263966 FANCD2OSQ96PS1 177 aa13.32□□□□□ -0.28
USP13-201ENST00000263966 XCL1P47992 114 aa13.32□□□□□ -0.28
USP13-201ENST00000263966 C8orf31Q8N9H6 132 aa13.32□□□□□ -0.28
USP13-201ENST00000263966 A0A096LPF7 62 aa13.32□□□□□ -0.28
USP13-201ENST00000263966 LY6HO94772 140 aa13.32□□□□□ -0.28
USP13-201ENST00000263966 TRACP01848 142 aa13.32□□□□□ -0.28
USP13-201ENST00000263966 NOP10Q9NPE3 64 aaKnown RBP13.32□□□□□ -0.28
USP13-201ENST00000263966 CD300CQ08708 224 aa13.32□□□□□ -0.28
USP13-201ENST00000263966 CD177Q8N6Q3 437 aa13.32□□□□□ -0.28
USP13-201ENST00000263966 Q8NFD4 153 aa13.32□□□□□ -0.28
USP13-201ENST00000263966 BAALCQ8WXS3 180 aa13.32□□□□□ -0.28
USP13-201ENST00000263966 CUL9Q8IWT3 2517 aa13.31□□□□□ -0.28
USP13-201ENST00000263966 BVES-AS1Q5T3Y7 98 aa13.31□□□□□ -0.28
USP13-201ENST00000263966 KNCNA6PVL3 124 aa13.31□□□□□ -0.28
USP13-201ENST00000263966 C5orf63A6NC05 138 aa13.31□□□□□ -0.28
USP13-201ENST00000263966 OR11H6Q8NGC7 330 aa13.31□□□□□ -0.28
USP13-201ENST00000263966 WDR83OSQ9Y284 106 aa13.31□□□□□ -0.28
USP13-201ENST00000263966 SHANK2-AS3Q9BTD1 123 aa13.31□□□□□ -0.28
USP13-201ENST00000263966 LYZL4Q96KX0 146 aa13.31□□□□□ -0.28
USP13-201ENST00000263966 AGMATQ9BSE5 352 aa13.31□□□□□ -0.28
USP13-201ENST00000263966 TMEM242Q9NWH2 141 aa13.3□□□□□ -0.28
USP13-201ENST00000263966 TRAV12-1A0A0B4J245 112 aa13.3□□□□□ -0.28
USP13-201ENST00000263966 F8W735 103 aaPredicted RBP13.3□□□□□ -0.28
USP13-201ENST00000263966 CFPP27918 469 aa13.3□□□□□ -0.28
USP13-201ENST00000263966 LAIR2Q6ISS4 152 aa13.3□□□□□ -0.28
USP13-201ENST00000263966 DEFB113Q30KQ7 82 aa13.3□□□□□ -0.28
USP13-201ENST00000263966 LINC00114Q6XXX2 140 aa13.3□□□□□ -0.28
USP13-201ENST00000263966 C8orf86Q6ZUL3 223 aa13.3□□□□□ -0.28
USP13-201ENST00000263966 MP68P56378 58 aa13.3□□□□□ -0.28
USP13-201ENST00000263966 KIR2DL5BQ8NHK3 375 aa13.3□□□□□ -0.28
USP13-201ENST00000263966 H3BUA1 57 aa13.3□□□□□ -0.28
USP13-201ENST00000263966 IGLL5B9A064 214 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms