RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 SMIM15Q7Z3B0 74 aa9.68□□□□□ -0.86
CHMP3-201ENST00000263856 GTSCR1Q86UQ5 136 aa9.68□□□□□ -0.86
CHMP3-201ENST00000263856 FANCD2OSQ96PS1 177 aa9.68□□□□□ -0.86
CHMP3-201ENST00000263856 MAP1LC3AQ9H492 121 aa9.68□□□□□ -0.86
CHMP3-201ENST00000263856 MAP1AP78559 2803 aaPredicted RBP9.68□□□□□ -0.86
CHMP3-201ENST00000263856 A0A1B0GW15 77 aa9.67□□□□□ -0.86
CHMP3-201ENST00000263856 K7ERJ3 54 aa9.67□□□□□ -0.86
CHMP3-201ENST00000263856 SPRY2O43597 315 aa9.67□□□□□ -0.86
CHMP3-201ENST00000263856 NDUFS7O75251 213 aa9.67□□□□□ -0.86
CHMP3-201ENST00000263856 RPL7P18124 248 aaKnown RBP9.67□□□□□ -0.86
CHMP3-201ENST00000263856 SEC11AP67812 179 aa9.67□□□□□ -0.86
CHMP3-201ENST00000263856 RAB1BQ9H0U4 201 aa9.67□□□□□ -0.86
CHMP3-201ENST00000263856 TRAV26-2A0A0B4J265 109 aa9.67□□□□□ -0.86
CHMP3-201ENST00000263856 PRAC2D3DTV9 90 aa9.67□□□□□ -0.86
CHMP3-201ENST00000263856 MRPS12O15235 138 aaKnown RBP9.67□□□□□ -0.86
CHMP3-201ENST00000263856 RPL24P83731 157 aaKnown RBP9.67□□□□□ -0.86
CHMP3-201ENST00000263856 C16orf54Q6UWD8 224 aa9.67□□□□□ -0.86
CHMP3-201ENST00000263856 LYPD1Q8N2G4 141 aa9.67□□□□□ -0.86
CHMP3-201ENST00000263856 KLK15Q9H2R5 256 aa9.67□□□□□ -0.86
CHMP3-201ENST00000263856 TMEM160Q9NX00 188 aa9.67□□□□□ -0.86
CHMP3-201ENST00000263856 SPCS1Q9Y6A9 102 aa9.67□□□□□ -0.86
CHMP3-201ENST00000263856 FGF6P10767 208 aa9.67□□□□□ -0.86
CHMP3-201ENST00000263856 CEACAM3P40198 252 aa9.67□□□□□ -0.86
CHMP3-201ENST00000263856 WI2-2373I1.2A0A1W2PRP0 233 aa9.66□□□□□ -0.86
CHMP3-201ENST00000263856 LGALS9BQ3B8N2 356 aa9.66□□□□□ -0.86
CHMP3-201ENST00000263856 LGALS9CQ6DKI2 356 aa9.66□□□□□ -0.86
CHMP3-201ENST00000263856 S100A7AQ86SG5 101 aa9.66□□□□□ -0.86
CHMP3-201ENST00000263856 OR2K2Q8NGT1 345 aa9.66□□□□□ -0.86
CHMP3-201ENST00000263856 IL17RELQ6ZVW7 336 aa9.66□□□□□ -0.86
CHMP3-201ENST00000263856 DYNAPQ8N1N2 210 aa9.66□□□□□ -0.86
CHMP3-201ENST00000263856 DEFB104AQ8WTQ1 72 aa9.66□□□□□ -0.86
CHMP3-201ENST00000263856 IGKV2D-26A0A0A0MRZ7 120 aa9.65□□□□□ -0.86
CHMP3-201ENST00000263856 C9orf118A6NHY6 69 aa9.65□□□□□ -0.86
CHMP3-201ENST00000263856 BMI1P35226 326 aa9.65□□□□□ -0.86
CHMP3-201ENST00000263856 HSD52Q0P140 79 aa9.65□□□□□ -0.86
CHMP3-201ENST00000263856 ZNF493Q6ZR52 646 aa9.65□□□□□ -0.86
CHMP3-201ENST00000263856 FOXC1Q12948 553 aa9.65□□□□□ -0.87
CHMP3-201ENST00000263856 BOD1L2Q8IYS8 172 aa9.65□□□□□ -0.87
CHMP3-201ENST00000263856 TMEM158Q8WZ71 300 aa9.65□□□□□ -0.87
CHMP3-201ENST00000263856 TIMD4Q96H15 378 aa9.65□□□□□ -0.87
CHMP3-201ENST00000263856 IGLV11-55A0A075B6I3 123 aa9.64□□□□□ -0.87
CHMP3-201ENST00000263856 HIF1ANQ9NWT6 349 aa9.64□□□□□ -0.87
CHMP3-201ENST00000263856 NHP2Q9NX24 153 aaKnown RBP9.64□□□□□ -0.87
CHMP3-201ENST00000263856 LINC00527Q9UJ94 153 aa9.64□□□□□ -0.87
CHMP3-201ENST00000263856 IGKV3-7A0A075B6H7 116 aa9.64□□□□□ -0.87
CHMP3-201ENST00000263856 TNFRSF6BO95407 300 aa9.64□□□□□ -0.87
CHMP3-201ENST00000263856 Q6ZQT7 251 aa9.64□□□□□ -0.87
CHMP3-201ENST00000263856 ZFHX3Q15911 3703 aa9.63□□□□□ -0.87
CHMP3-201ENST00000263856 LY6LH3BQJ8 138 aa9.63□□□□□ -0.87
CHMP3-201ENST00000263856 H3BRM9 83 aa9.63□□□□□ -0.87
CHMP3-201ENST00000263856 CCL21O00585 134 aa9.63□□□□□ -0.87
CHMP3-201ENST00000263856 TRGV3P03979 118 aa9.63□□□□□ -0.87
CHMP3-201ENST00000263856 CLEC3BP05452 202 aa9.63□□□□□ -0.87
CHMP3-201ENST00000263856 FXYD2P54710 66 aa9.63□□□□□ -0.87
CHMP3-201ENST00000263856 PDE6HQ13956 83 aa9.63□□□□□ -0.87
CHMP3-201ENST00000263856 C15orf32Q32M92 178 aa9.63□□□□□ -0.87
CHMP3-201ENST00000263856 ZC2HC1BQ5TFG8 222 aa9.63□□□□□ -0.87
CHMP3-201ENST00000263856 CLEC19AQ6UXS0 136 aa9.63□□□□□ -0.87
CHMP3-201ENST00000263856 MTURNQ8N3F0 131 aa9.63□□□□□ -0.87
CHMP3-201ENST00000263856 CFHR4Q92496 578 aa9.63□□□□□ -0.87
CHMP3-201ENST00000263856 SMAD5-AS1Q9Y6J3 95 aa9.63□□□□□ -0.87
CHMP3-201ENST00000263856 AGRNO00468 2067 aa9.63□□□□□ -0.87
CHMP3-201ENST00000263856 COL12A1Q99715 3063 aa9.63□□□□□ -0.87
CHMP3-201ENST00000263856 FABP5P3A8MUU1 101 aa9.63□□□□□ -0.87
CHMP3-201ENST00000263856 F8W735 103 aaPredicted RBP9.63□□□□□ -0.87
CHMP3-201ENST00000263856 TRBV6-1A0A0K0K1D8 114 aa9.63□□□□□ -0.87
CHMP3-201ENST00000263856 CTSGP08311 255 aa9.63□□□□□ -0.87
CHMP3-201ENST00000263856 VMO1Q7Z5L0 202 aa9.63□□□□□ -0.87
CHMP3-201ENST00000263856 CELSR1Q9NYQ6 3014 aa9.63□□□□□ -0.87
CHMP3-201ENST00000263856 PPBPP02775 128 aa9.62□□□□□ -0.87
CHMP3-201ENST00000263856 FABP2P12104 132 aa9.62□□□□□ -0.87
CHMP3-201ENST00000263856 LCNL1Q6ZST4 164 aa9.62□□□□□ -0.87
CHMP3-201ENST00000263856 OR1N2Q8NGR9 330 aa9.62□□□□□ -0.87
CHMP3-201ENST00000263856 COL25A1Q9BXS0 654 aaPredicted RBP9.62□□□□□ -0.87
CHMP3-201ENST00000263856 JKAMPQ9P055 326 aa9.62□□□□□ -0.87
CHMP3-201ENST00000263856 TRAV40A0A0B4J280 105 aa9.62□□□□□ -0.87
CHMP3-201ENST00000263856 NDUFA3O95167 84 aa9.62□□□□□ -0.87
CHMP3-201ENST00000263856 ZNF562Q6V9R5 426 aa9.62□□□□□ -0.87
CHMP3-201ENST00000263856 OR9G4Q8NGQ1 327 aa9.62□□□□□ -0.87
CHMP3-201ENST00000263856 RNF5Q99942 180 aa9.62□□□□□ -0.87
CHMP3-201ENST00000263856 G3V318 75 aa9.61□□□□□ -0.87
CHMP3-201ENST00000263856 K7EP34 96 aa9.61□□□□□ -0.87
CHMP3-201ENST00000263856 SCGB2A1O75556 95 aa9.61□□□□□ -0.87
CHMP3-201ENST00000263856 SPANXN1Q5VSR9 72 aa9.61□□□□□ -0.87
CHMP3-201ENST00000263856 IGHV3OR16-10A0A075B7F0 116 aa9.61□□□□□ -0.87
CHMP3-201ENST00000263856 TMEM8BA6NDV4 472 aa9.61□□□□□ -0.87
CHMP3-201ENST00000263856 IGKCP01834 107 aa9.61□□□□□ -0.87
CHMP3-201ENST00000263856 SMIM13P0DJ93 91 aa9.61□□□□□ -0.87
CHMP3-201ENST00000263856 EFNA4P52798 201 aa9.61□□□□□ -0.87
CHMP3-201ENST00000263856 RPS20P60866 119 aaKnown RBP9.61□□□□□ -0.87
CHMP3-201ENST00000263856 PAX2Q02962 417 aa9.61□□□□□ -0.87
CHMP3-201ENST00000263856 SAMD5Q5TGI4 173 aa9.61□□□□□ -0.87
CHMP3-201ENST00000263856 ADAMTSL5Q6ZMM2 481 aa9.61□□□□□ -0.87
CHMP3-201ENST00000263856 DTX2Q86UW9 622 aa9.61□□□□□ -0.87
CHMP3-201ENST00000263856 OR4X2Q8NGF9 303 aa9.61□□□□□ -0.87
CHMP3-201ENST00000263856 HRNRQ86YZ3 2850 aaPredicted RBP9.61□□□□□ -0.87
CHMP3-201ENST00000263856 RNF185Q96GF1 192 aa9.61□□□□□ -0.87
CHMP3-201ENST00000263856 CHAC1Q9BUX1 264 aa9.61□□□□□ -0.87
CHMP3-201ENST00000263856 A0A1W2PPM0 123 aa9.6□□□□□ -0.87
CHMP3-201ENST00000263856 CDSNQ15517 529 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms