RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 TMEM136Q6ZRR5 245 aa12□□□□□ -0.49
VPS26A-201ENST00000263559 COX8CQ7Z4L0 72 aa12□□□□□ -0.49
VPS26A-201ENST00000263559 C20orf173Q96LM9 149 aa12□□□□□ -0.49
VPS26A-201ENST00000263559 CUBNO60494 3623 aa12□□□□□ -0.49
VPS26A-201ENST00000263559 SOCS3O14543 225 aa12□□□□□ -0.49
VPS26A-201ENST00000263559 CDX1P47902 265 aaPredicted RBP12□□□□□ -0.49
VPS26A-201ENST00000263559 C18orf65Q6ZTR6 163 aa12□□□□□ -0.49
VPS26A-201ENST00000263559 IGKV3-7A0A075B6H7 116 aa11.99□□□□□ -0.49
VPS26A-201ENST00000263559 XKRY2A2RUG3 117 aa11.99□□□□□ -0.49
VPS26A-201ENST00000263559 WDR73Q6P4I2 378 aa11.99□□□□□ -0.49
VPS26A-201ENST00000263559 GFRA4Q9GZZ7 299 aa11.99□□□□□ -0.49
VPS26A-201ENST00000263559 AGPAT4-IT1Q9H0P7 198 aa11.99□□□□□ -0.49
VPS26A-201ENST00000263559 NRN1Q9NPD7 142 aa11.99□□□□□ -0.49
VPS26A-201ENST00000263559 CLEC5AQ9NY25 188 aa11.99□□□□□ -0.49
VPS26A-201ENST00000263559 TMEM213A2RRL7 107 aa11.99□□□□□ -0.49
VPS26A-201ENST00000263559 RAB4BP61018 213 aa11.99□□□□□ -0.49
VPS26A-201ENST00000263559 TCTEX1D4Q5JR98 221 aa11.99□□□□□ -0.49
VPS26A-201ENST00000263559 IFITM10A6NMD0 228 aa11.98□□□□□ -0.49
VPS26A-201ENST00000263559 ZNF80P51504 273 aaPredicted RBP11.98□□□□□ -0.49
VPS26A-201ENST00000263559 SYNJ2BPP57105 145 aa11.98□□□□□ -0.49
VPS26A-201ENST00000263559 COX19Q49B96 90 aa11.98□□□□□ -0.49
VPS26A-201ENST00000263559 PDZD11Q5EBL8 140 aa11.98□□□□□ -0.49
VPS26A-201ENST00000263559 PGLYRP4Q96LB8 373 aa11.98□□□□□ -0.49
VPS26A-201ENST00000263559 SH2D1AO60880 128 aa11.98□□□□□ -0.49
VPS26A-201ENST00000263559 SRD5A1P18405 259 aa11.98□□□□□ -0.49
VPS26A-201ENST00000263559 HOXD3P31249 432 aaPredicted RBP11.98□□□□□ -0.49
VPS26A-201ENST00000263559 FAM231BA6NCW3 169 aa11.97□□□□□ -0.49
VPS26A-201ENST00000263559 MT-ND6P03923 174 aa11.97□□□□□ -0.49
VPS26A-201ENST00000263559 FAM162BQ5T6X4 162 aa11.97□□□□□ -0.49
VPS26A-201ENST00000263559 HIST3H2BBQ8N257 126 aa11.97□□□□□ -0.49
VPS26A-201ENST00000263559 WIPF2Q8TF74 440 aaPredicted RBP11.97□□□□□ -0.49
VPS26A-201ENST00000263559 NDFIP1Q9BT67 221 aa11.97□□□□□ -0.49
VPS26A-201ENST00000263559 GDF5OSQ5U4N7 250 aa11.97□□□□□ -0.49
VPS26A-201ENST00000263559 RASL11AQ6T310 242 aa11.97□□□□□ -0.49
VPS26A-201ENST00000263559 RBPMS2Q6ZRY4 209 aaKnown RBP11.97□□□□□ -0.49
VPS26A-201ENST00000263559 REC114Q7Z4M0 266 aa11.97□□□□□ -0.49
VPS26A-201ENST00000263559 ZNF738Q8NE65 137 aa11.97□□□□□ -0.49
VPS26A-201ENST00000263559 DEFB136Q30KP8 78 aa11.96□□□□□ -0.49
VPS26A-201ENST00000263559 A8MWP6 167 aa11.96□□□□□ -0.5
VPS26A-201ENST00000263559 LGALS9O00182 355 aa11.96□□□□□ -0.5
VPS26A-201ENST00000263559 HLA-DQA1P01909 254 aa11.96□□□□□ -0.5
VPS26A-201ENST00000263559 ZNF705DP0CH99 300 aaPredicted RBP11.96□□□□□ -0.5
VPS26A-201ENST00000263559 ZNF705BP0CI00 300 aaPredicted RBP11.96□□□□□ -0.5
VPS26A-201ENST00000263559 FOXA3P55318 350 aaPredicted RBP11.96□□□□□ -0.5
VPS26A-201ENST00000263559 COA6Q5JTJ3 125 aaKnown RBP11.96□□□□□ -0.5
VPS26A-201ENST00000263559 TMEM78Q5T7P6 136 aa11.96□□□□□ -0.5
VPS26A-201ENST00000263559 HIST2H2BDQ6DRA6 164 aa11.96□□□□□ -0.5
VPS26A-201ENST00000263559 C9orf47Q6ZRZ4 202 aa11.96□□□□□ -0.5
VPS26A-201ENST00000263559 TMEM160Q9NX00 188 aa11.96□□□□□ -0.5
VPS26A-201ENST00000263559 NF1P21359 2839 aa11.96□□□□□ -0.5
VPS26A-201ENST00000263559 A0A1B0GXF2 115 aa11.95□□□□□ -0.5
VPS26A-201ENST00000263559 CAMPP49913 170 aa11.95□□□□□ -0.5
VPS26A-201ENST00000263559 ZNF138P52744 262 aa11.95□□□□□ -0.5
VPS26A-201ENST00000263559 ATP5L2Q7Z4Y8 100 aa11.95□□□□□ -0.5
VPS26A-201ENST00000263559 MTORP42345 2549 aa11.95□□□□□ -0.5
VPS26A-201ENST00000263559 GRIFINA4D1Z8 144 aa11.95□□□□□ -0.5
VPS26A-201ENST00000263559 KIAA1644Q3SXP7 199 aa11.95□□□□□ -0.5
VPS26A-201ENST00000263559 TMEM189A5PLL7 270 aa11.94□□□□□ -0.5
VPS26A-201ENST00000263559 LY6G6DO95868 133 aa11.94□□□□□ -0.5
VPS26A-201ENST00000263559 DEFB1P60022 68 aa11.94□□□□□ -0.5
VPS26A-201ENST00000263559 SCGB2A2Q13296 93 aa11.94□□□□□ -0.5
VPS26A-201ENST00000263559 KHDC1LQ5JSQ8 128 aa11.94□□□□□ -0.5
VPS26A-201ENST00000263559 NOTCH2Q04721 2471 aa11.94□□□□□ -0.5
VPS26A-201ENST00000263559 TMSB15BA0A087X1C1 80 aa11.94□□□□□ -0.5
VPS26A-201ENST00000263559 RNASE1P07998 156 aaKnown RBP11.94□□□□□ -0.5
VPS26A-201ENST00000263559 BMI1P35226 326 aa11.94□□□□□ -0.5
VPS26A-201ENST00000263559 SLURP1P55000 103 aa11.94□□□□□ -0.5
VPS26A-201ENST00000263559 KLF5Q13887 457 aaPredicted RBP11.94□□□□□ -0.5
VPS26A-201ENST00000263559 LINC00518Q8N0U6 118 aa11.94□□□□□ -0.5
VPS26A-201ENST00000263559 A0A1B0GUS0 222 aa11.94□□□□□ -0.5
VPS26A-201ENST00000263559 SLAQ13239 276 aa11.94□□□□□ -0.5
VPS26A-201ENST00000263559 OR11H1Q8NG94 326 aa11.94□□□□□ -0.5
VPS26A-201ENST00000263559 C4orf3Q8WVX3 66 aa11.94□□□□□ -0.5
VPS26A-201ENST00000263559 APCSP02743 223 aa11.93□□□□□ -0.5
VPS26A-201ENST00000263559 HBBP68871 147 aa11.93□□□□□ -0.5
VPS26A-201ENST00000263559 WFDC3Q8IUB2 231 aa11.93□□□□□ -0.5
VPS26A-201ENST00000263559 DCANP1Q8TF63 244 aa11.93□□□□□ -0.5
VPS26A-201ENST00000263559 SSBP4Q9BWG4 385 aaPredicted RBP11.93□□□□□ -0.5
VPS26A-201ENST00000263559 PPP1R14DQ9NXH3 145 aa11.93□□□□□ -0.5
VPS26A-201ENST00000263559 FABP5P3A8MUU1 101 aa11.93□□□□□ -0.5
VPS26A-201ENST00000263559 S100A8P05109 93 aa11.93□□□□□ -0.5
VPS26A-201ENST00000263559 CRISP2P16562 243 aa11.93□□□□□ -0.5
VPS26A-201ENST00000263559 C2orf70A6NJV1 201 aa11.92□□□□□ -0.5
VPS26A-201ENST00000263559 LINC01619G3V211 115 aa11.92□□□□□ -0.5
VPS26A-201ENST00000263559 OVOL1O14753 267 aa11.92□□□□□ -0.5
VPS26A-201ENST00000263559 PRR31Q5SQ13 230 aa11.92□□□□□ -0.5
VPS26A-201ENST00000263559 ZNF418Q8TF45 676 aaPredicted RBP11.92□□□□□ -0.5
VPS26A-201ENST00000263559 DUX3Q96PT4 197 aa11.92□□□□□ -0.5
VPS26A-201ENST00000263559 S100A2P29034 98 aa11.92□□□□□ -0.5
VPS26A-201ENST00000263559 ZNF575Q86XF7 245 aa11.92□□□□□ -0.5
VPS26A-201ENST00000263559 KLHL30-AS1Q8NEE0 82 aa11.92□□□□□ -0.5
VPS26A-201ENST00000263559 MS4A6AQ9H2W1 248 aa11.92□□□□□ -0.5
VPS26A-201ENST00000263559 OTOGQ6ZRI0 2925 aa11.91□□□□□ -0.5
VPS26A-201ENST00000263559 F6UB75 175 aa11.91□□□□□ -0.5
VPS26A-201ENST00000263559 FABP4P15090 132 aa11.91□□□□□ -0.5
VPS26A-201ENST00000263559 TMEM256Q8N2U0 113 aa11.91□□□□□ -0.5
VPS26A-201ENST00000263559 OR1N2Q8NGR9 330 aa11.91□□□□□ -0.5
VPS26A-201ENST00000263559 OR10J6PQ8NGY7 276 aa11.91□□□□□ -0.5
VPS26A-201ENST00000263559 TPPP3Q9BW30 176 aa11.91□□□□□ -0.5
VPS26A-201ENST00000263559 HIVEP2P31629 2446 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms