RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 IL4P05112 153 aa11.75□□□□□ -0.53
XRCC1-201ENST00000262887 SPINK8P0C7L1 97 aa11.75□□□□□ -0.53
XRCC1-201ENST00000262887 CYSLTR1Q9Y271 337 aa11.75□□□□□ -0.53
XRCC1-201ENST00000262887 NPIPB5A8MRT5 1133 aa11.74□□□□□ -0.53
XRCC1-201ENST00000262887 IGHV1-8P0DP01 117 aa11.74□□□□□ -0.53
XRCC1-201ENST00000262887 CD40P25942 277 aa11.74□□□□□ -0.53
XRCC1-201ENST00000262887 INSL3P51460 131 aa11.74□□□□□ -0.53
XRCC1-201ENST00000262887 KLF17Q5JT82 389 aaPredicted RBP11.74□□□□□ -0.53
XRCC1-201ENST00000262887 ZC2HC1BQ5TFG8 222 aa11.74□□□□□ -0.53
XRCC1-201ENST00000262887 C22orf34Q6ZV56 151 aa11.74□□□□□ -0.53
XRCC1-201ENST00000262887 CCL17Q92583 94 aa11.74□□□□□ -0.53
XRCC1-201ENST00000262887 RNF125Q96EQ8 232 aa11.74□□□□□ -0.53
XRCC1-201ENST00000262887 FOXC2Q99958 501 aa11.74□□□□□ -0.53
XRCC1-201ENST00000262887 BSNQ9UPA5 3926 aa11.74□□□□□ -0.53
XRCC1-201ENST00000262887 LINC01546A6NGU7 62 aa11.74□□□□□ -0.53
XRCC1-201ENST00000262887 DPM2O94777 84 aa11.74□□□□□ -0.53
XRCC1-201ENST00000262887 PLGLAQ15195 96 aa11.74□□□□□ -0.53
XRCC1-201ENST00000262887 GAGE13Q4V321 117 aa11.74□□□□□ -0.53
XRCC1-201ENST00000262887 ZNF318Q5VUA4 2279 aa11.74□□□□□ -0.53
XRCC1-201ENST00000262887 FBXL15Q9H469 300 aa11.74□□□□□ -0.53
XRCC1-201ENST00000262887 CHD8Q9HCK8 2581 aa11.74□□□□□ -0.53
XRCC1-201ENST00000262887 C16orf97H3BN30 126 aa11.73□□□□□ -0.53
XRCC1-201ENST00000262887 HLA-DRB4P13762 266 aa11.73□□□□□ -0.53
XRCC1-201ENST00000262887 CD59P13987 128 aa11.73□□□□□ -0.53
XRCC1-201ENST00000262887 C12orf74Q32Q52 190 aa11.73□□□□□ -0.53
XRCC1-201ENST00000262887 ZNF491Q8N8L2 437 aa11.73□□□□□ -0.53
XRCC1-201ENST00000262887 ZNF502Q8TBZ5 544 aa11.73□□□□□ -0.53
XRCC1-201ENST00000262887 HLA-DRB4X5D2U9 266 aa11.73□□□□□ -0.53
XRCC1-201ENST00000262887 C17orf100A8MU93 164 aa11.73□□□□□ -0.53
XRCC1-201ENST00000262887 MRPS12O15235 138 aaKnown RBP11.73□□□□□ -0.53
XRCC1-201ENST00000262887 LOXP28300 417 aaPredicted RBP11.73□□□□□ -0.53
XRCC1-201ENST00000262887 AMTNQ6UX39 209 aa11.73□□□□□ -0.53
XRCC1-201ENST00000262887 TMEM8BA6NDV4 472 aa11.73□□□□□ -0.53
XRCC1-201ENST00000262887 EGR2P11161 476 aaPredicted RBP11.73□□□□□ -0.53
XRCC1-201ENST00000262887 DLX6P56179 175 aa11.73□□□□□ -0.53
XRCC1-201ENST00000262887 HERV-K104P63124 156 aa11.73□□□□□ -0.53
XRCC1-201ENST00000262887 SRSF6Q13247 344 aaKnown RBP11.73□□□□□ -0.53
XRCC1-201ENST00000262887 TAL2Q16559 108 aa11.73□□□□□ -0.53
XRCC1-201ENST00000262887 C20orf78Q9BR46 151 aa11.73□□□□□ -0.53
XRCC1-201ENST00000262887 NXT2Q9NPJ8 142 aaKnown RBP11.73□□□□□ -0.53
XRCC1-201ENST00000262887 CTSZQ9UBR2 303 aa11.73□□□□□ -0.53
XRCC1-201ENST00000262887 TMEM178BH3BS89 294 aa11.72□□□□□ -0.53
XRCC1-201ENST00000262887 ATP5LO75964 103 aa11.72□□□□□ -0.53
XRCC1-201ENST00000262887 FAM27E3Q08E93 113 aa11.72□□□□□ -0.53
XRCC1-201ENST00000262887 LINC01559Q495D7 138 aa11.72□□□□□ -0.53
XRCC1-201ENST00000262887 TMEM155Q4W5P6 130 aa11.72□□□□□ -0.53
XRCC1-201ENST00000262887 ADGRG4Q8IZF6 3080 aa11.72□□□□□ -0.53
XRCC1-201ENST00000262887 IGKV2-40A0A087WW87 121 aaPredicted RBP11.72□□□□□ -0.53
XRCC1-201ENST00000262887 TRBV7-9A0A0J9YWB2 115 aa11.72□□□□□ -0.53
XRCC1-201ENST00000262887 CEACAM4O75871 244 aa11.72□□□□□ -0.53
XRCC1-201ENST00000262887 IGKV2D-40P01614 121 aaPredicted RBP11.72□□□□□ -0.53
XRCC1-201ENST00000262887 DLX1P56177 255 aa11.72□□□□□ -0.53
XRCC1-201ENST00000262887 PRB3Q04118 309 aaPredicted RBP11.72□□□□□ -0.53
XRCC1-201ENST00000262887 GAGE5Q13069 117 aa11.72□□□□□ -0.53
XRCC1-201ENST00000262887 GAGE6Q13070 117 aa11.72□□□□□ -0.53
XRCC1-201ENST00000262887 RNF185Q96GF1 192 aa11.72□□□□□ -0.53
XRCC1-201ENST00000262887 FAM110AQ9BQ89 295 aa11.72□□□□□ -0.53
XRCC1-201ENST00000262887 ANKRD11Q6UB99 2663 aaPredicted RBP11.71□□□□□ -0.53
XRCC1-201ENST00000262887 K7EIM0 57 aa11.71□□□□□ -0.53
XRCC1-201ENST00000262887 PDE6HQ13956 83 aa11.71□□□□□ -0.53
XRCC1-201ENST00000262887 TMEM160Q9NX00 188 aa11.71□□□□□ -0.53
XRCC1-201ENST00000262887 IGFL2Q6UWQ7 119 aa11.71□□□□□ -0.54
XRCC1-201ENST00000262887 MAPKAPK5-AS1Q8N8E1 139 aa11.71□□□□□ -0.54
XRCC1-201ENST00000262887 CDIP1Q9H305 208 aa11.71□□□□□ -0.54
XRCC1-201ENST00000262887 PRO0461Q9UI25 63 aa11.71□□□□□ -0.54
XRCC1-201ENST00000262887 IGHV1-3A0A0C4DH29 117 aa11.7□□□□□ -0.54
XRCC1-201ENST00000262887 GAS8-AS1O95177 125 aa11.7□□□□□ -0.54
XRCC1-201ENST00000262887 TNFRSF6BO95407 300 aa11.7□□□□□ -0.54
XRCC1-201ENST00000262887 IGLC6P0CF74 106 aa11.7□□□□□ -0.54
XRCC1-201ENST00000262887 PRSS33Q8NF86 280 aa11.7□□□□□ -0.54
XRCC1-201ENST00000262887 NUP37Q8NFH4 326 aa11.7□□□□□ -0.54
XRCC1-201ENST00000262887 TMEM158Q8WZ71 300 aa11.7□□□□□ -0.54
XRCC1-201ENST00000262887 PRR25Q96S07 402 aa11.7□□□□□ -0.54
XRCC1-201ENST00000262887 MSRB1Q9NZV6 116 aa11.7□□□□□ -0.54
XRCC1-201ENST00000262887 TRAV40A0A0B4J280 105 aa11.7□□□□□ -0.54
XRCC1-201ENST00000262887 KALRNO60229 2985 aa11.7□□□□□ -0.54
XRCC1-201ENST00000262887 CNIH1O95406 144 aa11.7□□□□□ -0.54
XRCC1-201ENST00000262887 MT-ATP8P03928 68 aa11.7□□□□□ -0.54
XRCC1-201ENST00000262887 ASCL5Q7RTU5 278 aa11.7□□□□□ -0.54
XRCC1-201ENST00000262887 FAM215AQ9Y5M1 114 aa11.7□□□□□ -0.54
XRCC1-201ENST00000262887 IGF2RP11717 2491 aa11.69□□□□□ -0.54
XRCC1-201ENST00000262887 KLRD1Q13241 179 aa11.69□□□□□ -0.54
XRCC1-201ENST00000262887 RRN3P1Q2M238 152 aa11.69□□□□□ -0.54
XRCC1-201ENST00000262887 COX8CQ7Z4L0 72 aa11.69□□□□□ -0.54
XRCC1-201ENST00000262887 Q8TAT8 98 aa11.69□□□□□ -0.54
XRCC1-201ENST00000262887 HIST1H4GQ99525 98 aa11.69□□□□□ -0.54
XRCC1-201ENST00000262887 ADIPOQQ15848 244 aa11.69□□□□□ -0.54
XRCC1-201ENST00000262887 SYT8Q8NBV8 401 aa11.69□□□□□ -0.54
XRCC1-201ENST00000262887 S4R3C0 116 aa11.69□□□□□ -0.54
XRCC1-201ENST00000262887 A0A1B0GWB2 263 aa11.68□□□□□ -0.54
XRCC1-201ENST00000262887 PRRG2O14669 202 aa11.68□□□□□ -0.54
XRCC1-201ENST00000262887 ZNF80P51504 273 aaPredicted RBP11.68□□□□□ -0.54
XRCC1-201ENST00000262887 AGRNO00468 2067 aa11.68□□□□□ -0.54
XRCC1-201ENST00000262887 TNFRSF13BO14836 293 aaPredicted RBP11.68□□□□□ -0.54
XRCC1-201ENST00000262887 ANAPC13Q9BS18 74 aa11.68□□□□□ -0.54
XRCC1-201ENST00000262887 MRPL35Q9NZE8 188 aaKnown RBP11.68□□□□□ -0.54
XRCC1-201ENST00000262887 APOMO95445 188 aa11.67□□□□□ -0.54
XRCC1-201ENST00000262887 ORM1P02763 201 aa11.67□□□□□ -0.54
XRCC1-201ENST00000262887 B5MCH6 92 aa11.67□□□□□ -0.54
XRCC1-201ENST00000262887 CDX4O14627 284 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms