RNA–Protein interactions for RNA: ENST00000257468.11

UBQLN1-201, Transcript of ubiquilin 1, humanhuman

TSL 1 (best) BASIC

Gene UBQLN1, Length 2,299 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-201ENST00000257468 hDV102S1A0JD36 115 aa12.73□□□□□ -0.37
UBQLN1-201ENST00000257468 CRXO43186 299 aaPredicted RBP12.73□□□□□ -0.37
UBQLN1-201ENST00000257468 IFI27P40305 119 aaPredicted RBP12.73□□□□□ -0.37
UBQLN1-201ENST00000257468 LOXL1Q08397 574 aaPredicted RBP12.73□□□□□ -0.37
UBQLN1-201ENST00000257468 LY6EQ16553 131 aa12.73□□□□□ -0.37
UBQLN1-201ENST00000257468 PMCHL2Q9BQD1 86 aa12.73□□□□□ -0.37
UBQLN1-201ENST00000257468 A0A087X0K7 114 aa12.73□□□□□ -0.37
UBQLN1-201ENST00000257468 TRAV41A0A0B4J266 112 aa12.73□□□□□ -0.37
UBQLN1-201ENST00000257468 SMKR1H3BMG3 65 aa12.73□□□□□ -0.37
UBQLN1-201ENST00000257468 ORM1P02763 201 aa12.73□□□□□ -0.37
UBQLN1-201ENST00000257468 PIMREGQ9BSJ6 248 aa12.73□□□□□ -0.37
UBQLN1-201ENST00000257468 AP5S1Q9NUS5 200 aa12.73□□□□□ -0.37
UBQLN1-201ENST00000257468 ATP5G2Q06055 141 aa12.72□□□□□ -0.37
UBQLN1-201ENST00000257468 TWIST1Q15672 202 aa12.72□□□□□ -0.37
UBQLN1-201ENST00000257468 FAM104BQ5XKR9 115 aa12.72□□□□□ -0.37
UBQLN1-201ENST00000257468 ARL6IP6Q8N6S5 226 aa12.72□□□□□ -0.37
UBQLN1-201ENST00000257468 FER1L6-AS1Q8NA97 138 aa12.72□□□□□ -0.37
UBQLN1-201ENST00000257468 PRSS3P2Q8NHM4 247 aa12.72□□□□□ -0.37
UBQLN1-201ENST00000257468 MSRB1Q9NZV6 116 aa12.72□□□□□ -0.37
UBQLN1-201ENST00000257468 TRBV7-1A0A0A6YYK4 115 aa12.72□□□□□ -0.37
UBQLN1-201ENST00000257468 TRAV8-2A0A0B4J237 113 aa12.72□□□□□ -0.37
UBQLN1-201ENST00000257468 ZNF25P17030 456 aaPredicted RBP12.72□□□□□ -0.37
UBQLN1-201ENST00000257468 TSPOP30536 169 aa12.72□□□□□ -0.37
UBQLN1-201ENST00000257468 FXYD7P58549 80 aa12.72□□□□□ -0.37
UBQLN1-201ENST00000257468 MRPL51Q4U2R6 128 aaKnown RBP12.72□□□□□ -0.37
UBQLN1-201ENST00000257468 IGHV4-30-2A0A087WSY4 118 aa12.71□□□□□ -0.37
UBQLN1-201ENST00000257468 TRBV12-3P01733 135 aa12.71□□□□□ -0.37
UBQLN1-201ENST00000257468 IGLC6P0CF74 106 aa12.71□□□□□ -0.37
UBQLN1-201ENST00000257468 PPIFP30405 207 aaKnown RBP12.71□□□□□ -0.37
UBQLN1-201ENST00000257468 BMI1P35226 326 aa12.71□□□□□ -0.37
UBQLN1-201ENST00000257468 FA2HQ7L5A8 372 aa12.71□□□□□ -0.37
UBQLN1-201ENST00000257468 C10orf105Q8TEF2 133 aa12.71□□□□□ -0.37
UBQLN1-201ENST00000257468 PSMG3-AS1Q96PY0 264 aa12.71□□□□□ -0.37
UBQLN1-201ENST00000257468 METTL26Q96S19 204 aa12.71□□□□□ -0.37
UBQLN1-201ENST00000257468 IGSF10Q6WRI0 2623 aa12.71□□□□□ -0.38
UBQLN1-201ENST00000257468 NCR2O95944 276 aa12.71□□□□□ -0.38
UBQLN1-201ENST00000257468 OR5AL1P0C617 328 aa12.71□□□□□ -0.38
UBQLN1-201ENST00000257468 S100A7P31151 101 aa12.71□□□□□ -0.38
UBQLN1-201ENST00000257468 C19orf54Q5BKX5 351 aa12.71□□□□□ -0.38
UBQLN1-201ENST00000257468 STPG4Q8N801 248 aa12.71□□□□□ -0.38
UBQLN1-201ENST00000257468 PRELID3AQ96N28 172 aa12.71□□□□□ -0.38
UBQLN1-201ENST00000257468 SIGLEC8Q9NYZ4 499 aa12.71□□□□□ -0.38
UBQLN1-201ENST00000257468 LAMTOR2Q9Y2Q5 125 aa12.71□□□□□ -0.38
UBQLN1-201ENST00000257468 SPG11Q96JI7 2443 aa12.7□□□□□ -0.38
UBQLN1-201ENST00000257468 TRGV3P03979 118 aa12.7□□□□□ -0.38
UBQLN1-201ENST00000257468 C8orf86Q6ZUL3 223 aa12.7□□□□□ -0.38
UBQLN1-201ENST00000257468 MAP1LC3CQ9BXW4 147 aa12.7□□□□□ -0.38
UBQLN1-201ENST00000257468 AGPAT4-IT1Q9H0P7 198 aa12.7□□□□□ -0.38
UBQLN1-201ENST00000257468 FBLL1A6NHQ2 334 aaKnown RBP12.69□□□□□ -0.38
UBQLN1-201ENST00000257468 RAB9AP51151 201 aa12.69□□□□□ -0.38
UBQLN1-201ENST00000257468 Q6ZQT7 251 aa12.69□□□□□ -0.38
UBQLN1-201ENST00000257468 A0A096LNJ9 63 aa12.69□□□□□ -0.38
UBQLN1-201ENST00000257468 ATP5J2P56134 94 aa12.69□□□□□ -0.38
UBQLN1-201ENST00000257468 SLC50A1Q9BRV3 221 aa12.69□□□□□ -0.38
UBQLN1-201ENST00000257468 U3KQK5 164 aa12.69□□□□□ -0.38
UBQLN1-201ENST00000257468 FABP5P3A8MUU1 101 aa12.68□□□□□ -0.38
UBQLN1-201ENST00000257468 GAS8-AS1O95177 125 aa12.68□□□□□ -0.38
UBQLN1-201ENST00000257468 HINT1P49773 126 aaPredicted RBP12.68□□□□□ -0.38
UBQLN1-201ENST00000257468 UNQ9165/PRO28630Q6UXU0 137 aa12.68□□□□□ -0.38
UBQLN1-201ENST00000257468 ORMDL3Q8N138 153 aa12.68□□□□□ -0.38
UBQLN1-201ENST00000257468 C11orf21Q9P2W6 132 aa12.68□□□□□ -0.38
UBQLN1-201ENST00000257468 HSPB8Q9UJY1 196 aa12.68□□□□□ -0.38
UBQLN1-201ENST00000257468 H3BUX3 64 aa12.68□□□□□ -0.38
UBQLN1-201ENST00000257468 RPS20P60866 119 aaKnown RBP12.68□□□□□ -0.38
UBQLN1-201ENST00000257468 Q6ZS46 218 aa12.68□□□□□ -0.38
UBQLN1-201ENST00000257468 LCNL1Q6ZST4 164 aa12.68□□□□□ -0.38
UBQLN1-201ENST00000257468 NRGNQ92686 78 aa12.68□□□□□ -0.38
UBQLN1-201ENST00000257468 USP9XQ93008 2570 aaPredicted RBP12.67□□□□□ -0.38
UBQLN1-201ENST00000257468 C20orf202A1L168 122 aa12.67□□□□□ -0.38
UBQLN1-201ENST00000257468 NPYP01303 97 aa12.67□□□□□ -0.38
UBQLN1-201ENST00000257468 ARL3P36405 182 aa12.67□□□□□ -0.38
UBQLN1-201ENST00000257468 CLEC2AQ6UVW9 174 aa12.67□□□□□ -0.38
UBQLN1-201ENST00000257468 ZNF747Q9BV97 191 aa12.67□□□□□ -0.38
UBQLN1-201ENST00000257468 U3KQE9 123 aa12.67□□□□□ -0.38
UBQLN1-201ENST00000257468 IGHV3-11P01762 117 aa12.67□□□□□ -0.38
UBQLN1-201ENST00000257468 COL5A1-AS1Q5SY13 56 aa12.67□□□□□ -0.38
UBQLN1-201ENST00000257468 CYB5R2Q6BCY4 276 aa12.67□□□□□ -0.38
UBQLN1-201ENST00000257468 OR10AG1Q8NH19 301 aa12.67□□□□□ -0.38
UBQLN1-201ENST00000257468 TMEM208Q9BTX3 173 aa12.67□□□□□ -0.38
UBQLN1-201ENST00000257468 TMEM191AQ9H0A3 160 aa12.67□□□□□ -0.38
UBQLN1-201ENST00000257468 IGKV3D-20A0A0C4DH25 116 aa12.66□□□□□ -0.38
UBQLN1-201ENST00000257468 SMAD7O15105 426 aaKnown RBP12.66□□□□□ -0.38
UBQLN1-201ENST00000257468 CKS2P33552 79 aa12.66□□□□□ -0.38
UBQLN1-201ENST00000257468 BLCAPP62952 87 aa12.66□□□□□ -0.38
UBQLN1-201ENST00000257468 PET117Q6UWS5 81 aa12.66□□□□□ -0.38
UBQLN1-201ENST00000257468 MEGF9Q9H1U4 602 aa12.66□□□□□ -0.38
UBQLN1-201ENST00000257468 SELENOKQ9Y6D0 94 aa12.66□□□□□ -0.38
UBQLN1-201ENST00000257468 RBAKDNA6NC62 111 aa12.65□□□□□ -0.38
UBQLN1-201ENST00000257468 FAM223BA6NKX1 122 aa12.65□□□□□ -0.38
UBQLN1-201ENST00000257468 LINC01559Q495D7 138 aa12.65□□□□□ -0.38
UBQLN1-201ENST00000257468 PRSS57Q6UWY2 283 aa12.65□□□□□ -0.38
UBQLN1-201ENST00000257468 FAM223AQ8IWN6 122 aa12.65□□□□□ -0.38
UBQLN1-201ENST00000257468 KLK15Q9H2R5 256 aa12.65□□□□□ -0.38
UBQLN1-201ENST00000257468 OR8A1Q8NGG7 326 aa12.65□□□□□ -0.38
UBQLN1-201ENST00000257468 RNF185Q96GF1 192 aa12.65□□□□□ -0.38
UBQLN1-201ENST00000257468 C20orf173Q96LM9 149 aa12.65□□□□□ -0.38
UBQLN1-201ENST00000257468 AVPP01185 164 aa12.64□□□□□ -0.39
UBQLN1-201ENST00000257468 CRIP2P52943 208 aaPredicted RBP12.64□□□□□ -0.39
UBQLN1-201ENST00000257468 FOXE3Q13461 319 aa12.64□□□□□ -0.39
UBQLN1-201ENST00000257468 TMEM78Q5T7P6 136 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms