RNA–Protein interactions for RNA: ENST00000250559.13

RAP1B-201, Transcript of RAP1B, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAP1B, Length 13,438 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-201ENST00000250559 GAGE4Q13068 117 aa3.68□□□□□ -1.82
RAP1B-201ENST00000250559 GAGE5Q13069 117 aa3.68□□□□□ -1.82
RAP1B-201ENST00000250559 GAGE13Q4V321 117 aa3.68□□□□□ -1.82
RAP1B-201ENST00000250559 RPL36ALQ969Q0 106 aaKnown RBP3.68□□□□□ -1.82
RAP1B-201ENST00000250559 EGR2P11161 476 aaPredicted RBP3.68□□□□□ -1.82
RAP1B-201ENST00000250559 COPS9Q8WXC6 57 aa3.68□□□□□ -1.82
RAP1B-201ENST00000250559 SMIM27A0A1W2PRY6 76 aa3.68□□□□□ -1.82
RAP1B-201ENST00000250559 FRMD6-AS1P0C7T7 363 aa3.68□□□□□ -1.82
RAP1B-201ENST00000250559 SIGLEC8Q9NYZ4 499 aa3.68□□□□□ -1.82
RAP1B-201ENST00000250559 GP9P14770 177 aa3.68□□□□□ -1.82
RAP1B-201ENST00000250559 Q6ZSR3 168 aa3.68□□□□□ -1.82
RAP1B-201ENST00000250559 SLX1AQ9BQ83 275 aa3.68□□□□□ -1.82
RAP1B-201ENST00000250559 NUPR1O60356 82 aa3.68□□□□□ -1.82
RAP1B-201ENST00000250559 RASL11AQ6T310 242 aa3.68□□□□□ -1.82
RAP1B-201ENST00000250559 MUC22E2RYF6 1773 aaPredicted RBP3.68□□□□□ -1.82
RAP1B-201ENST00000250559 TEX22C9J3V5 150 aa3.68□□□□□ -1.82
RAP1B-201ENST00000250559 CROCCQ5TZA2 2017 aa3.68□□□□□ -1.82
RAP1B-201ENST00000250559 GAGE12BA1L429 117 aa3.68□□□□□ -1.82
RAP1B-201ENST00000250559 GAGE7O76087 117 aa3.68□□□□□ -1.82
RAP1B-201ENST00000250559 GAGE12FP0CL80 117 aa3.68□□□□□ -1.82
RAP1B-201ENST00000250559 GAGE12GP0CL81 117 aa3.68□□□□□ -1.82
RAP1B-201ENST00000250559 GAGE12IP0CL82 117 aa3.68□□□□□ -1.82
RAP1B-201ENST00000250559 LY96Q9Y6Y9 160 aa3.68□□□□□ -1.82
RAP1B-201ENST00000250559 LTBP2Q14767 1821 aa3.68□□□□□ -1.82
RAP1B-201ENST00000250559 TRAV8-3A0A0A6YYJ7 113 aa3.68□□□□□ -1.82
RAP1B-201ENST00000250559 SLURP1P55000 103 aa3.68□□□□□ -1.82
RAP1B-201ENST00000250559 LINC00158P58513 81 aa3.68□□□□□ -1.82
RAP1B-201ENST00000250559 PRR20EP86478 221 aa3.68□□□□□ -1.82
RAP1B-201ENST00000250559 PRR20CP86479 221 aa3.68□□□□□ -1.82
RAP1B-201ENST00000250559 PRR20DP86480 221 aa3.68□□□□□ -1.82
RAP1B-201ENST00000250559 PRR20BP86481 221 aa3.68□□□□□ -1.82
RAP1B-201ENST00000250559 PRR20AP86496 221 aa3.68□□□□□ -1.82
RAP1B-201ENST00000250559 USMG5Q96IX5 58 aa3.68□□□□□ -1.82
RAP1B-201ENST00000250559 ZNF479Q96JC4 524 aa3.68□□□□□ -1.82
RAP1B-201ENST00000250559 ITGB1BP1O14713 200 aa3.68□□□□□ -1.82
RAP1B-201ENST00000250559 INSP01308 110 aa3.68□□□□□ -1.82
RAP1B-201ENST00000250559 MYO10Q9HD67 2058 aa3.68□□□□□ -1.82
RAP1B-201ENST00000250559 OBSL1O75147 1896 aa3.68□□□□□ -1.82
RAP1B-201ENST00000250559 HSD52Q0P140 79 aa3.68□□□□□ -1.82
RAP1B-201ENST00000250559 C6orf226Q5I0X4 101 aa3.68□□□□□ -1.82
RAP1B-201ENST00000250559 KLF2Q9Y5W3 355 aaPredicted RBP3.68□□□□□ -1.82
RAP1B-201ENST00000250559 COL6A6A6NMZ7 2263 aa3.68□□□□□ -1.82
RAP1B-201ENST00000250559 DNAJC13O75165 2243 aa3.68□□□□□ -1.82
RAP1B-201ENST00000250559 ASCC3Q8N3C0 2202 aaKnown RBP3.68□□□□□ -1.82
RAP1B-201ENST00000250559 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.68□□□□□ -1.82
RAP1B-201ENST00000250559 IGKV2-29A2NJV5 120 aaPredicted RBP3.68□□□□□ -1.82
RAP1B-201ENST00000250559 I3L3M4 83 aa3.68□□□□□ -1.82
RAP1B-201ENST00000250559 TRPT1Q86TN4 253 aaKnown RBP3.68□□□□□ -1.82
RAP1B-201ENST00000250559 MTURNQ8N3F0 131 aa3.68□□□□□ -1.82
RAP1B-201ENST00000250559 DKK2Q9UBU2 259 aa3.68□□□□□ -1.82
RAP1B-201ENST00000250559 KIR3DS1Q14943 382 aa3.67□□□□□ -1.82
RAP1B-201ENST00000250559 NPYP01303 97 aa3.67□□□□□ -1.82
RAP1B-201ENST00000250559 IGHV3-30P01768 117 aa3.67□□□□□ -1.82
RAP1B-201ENST00000250559 IGHV3-33P01772 117 aa3.67□□□□□ -1.82
RAP1B-201ENST00000250559 IGHV3-30-3P0DP02 117 aa3.67□□□□□ -1.82
RAP1B-201ENST00000250559 IGHV3-30-5P0DP03 117 aa3.67□□□□□ -1.82
RAP1B-201ENST00000250559 PDE6HQ13956 83 aa3.67□□□□□ -1.82
RAP1B-201ENST00000250559 CDSNQ15517 529 aa3.67□□□□□ -1.82
RAP1B-201ENST00000250559 LYPD6Q86Y78 171 aa3.67□□□□□ -1.82
RAP1B-201ENST00000250559 A0A087WX48 190 aa3.67□□□□□ -1.82
RAP1B-201ENST00000250559 PRAC2D3DTV9 90 aa3.67□□□□□ -1.82
RAP1B-201ENST00000250559 CCL24O00175 119 aa3.67□□□□□ -1.82
RAP1B-201ENST00000250559 SPINK8P0C7L1 97 aa3.67□□□□□ -1.82
RAP1B-201ENST00000250559 CKS1BP61024 79 aa3.67□□□□□ -1.82
RAP1B-201ENST00000250559 GAGE6Q13070 117 aa3.67□□□□□ -1.82
RAP1B-201ENST00000250559 DEFB135Q30KP9 77 aa3.67□□□□□ -1.82
RAP1B-201ENST00000250559 Q8N7P7 452 aa3.67□□□□□ -1.82
RAP1B-201ENST00000250559 PGPEP1Q9NXJ5 209 aa3.67□□□□□ -1.82
RAP1B-201ENST00000250559 C2orf66Q6UXQ4 117 aa3.67□□□□□ -1.82
RAP1B-201ENST00000250559 HELZP42694 1942 aaKnown RBP3.67□□□□□ -1.82
RAP1B-201ENST00000250559 SPAG17Q6Q759 2223 aa3.67□□□□□ -1.82
RAP1B-201ENST00000250559 TDRG1Q3Y452 100 aa3.67□□□□□ -1.82
RAP1B-201ENST00000250559 LYPD6BQ8NI32 183 aa3.67□□□□□ -1.82
RAP1B-201ENST00000250559 LINC00311Q8N616 119 aa3.67□□□□□ -1.82
RAP1B-201ENST00000250559 SMAD5-AS1Q9Y6J3 95 aa3.67□□□□□ -1.82
RAP1B-201ENST00000250559 IGHV7-4-1A0A0J9YVY3 117 aa3.67□□□□□ -1.82
RAP1B-201ENST00000250559 DNAJC9-AS1A6NH13 148 aa3.67□□□□□ -1.82
RAP1B-201ENST00000250559 TRAV8-2A0A0B4J237 113 aa3.67□□□□□ -1.82
RAP1B-201ENST00000250559 IGLC7A0M8Q6 106 aa3.67□□□□□ -1.82
RAP1B-201ENST00000250559 SDHAF1A6NFY7 115 aa3.67□□□□□ -1.82
RAP1B-201ENST00000250559 DNAL4O96015 105 aa3.67□□□□□ -1.82
RAP1B-201ENST00000250559 TEX43Q6ZNM6 134 aa3.67□□□□□ -1.82
RAP1B-201ENST00000250559 RPL39LQ96EH5 51 aaKnown RBP3.67□□□□□ -1.82
RAP1B-201ENST00000250559 RETNQ9HD89 108 aa3.67□□□□□ -1.82
RAP1B-201ENST00000250559 MRPL36Q9P0J6 103 aaKnown RBP3.67□□□□□ -1.82
RAP1B-201ENST00000250559 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.67□□□□□ -1.82
RAP1B-201ENST00000250559 TRAV8-4A0A0B4J246 113 aa3.67□□□□□ -1.82
RAP1B-201ENST00000250559 I3L2K1 104 aa3.67□□□□□ -1.82
RAP1B-201ENST00000250559 GATA3P23771 443 aa3.67□□□□□ -1.82
RAP1B-201ENST00000250559 FAM104BQ5XKR9 115 aa3.67□□□□□ -1.82
RAP1B-201ENST00000250559 CST9LQ9H4G1 147 aa3.67□□□□□ -1.82
RAP1B-201ENST00000250559 F5P12259 2224 aa3.67□□□□□ -1.82
RAP1B-201ENST00000250559 CACNA1EQ15878 2313 aa3.67□□□□□ -1.82
RAP1B-201ENST00000250559 EP400Q96L91 3159 aa3.67□□□□□ -1.82
RAP1B-201ENST00000250559 PPBPP02775 128 aa3.66□□□□□ -1.82
RAP1B-201ENST00000250559 OR11H6Q8NGC7 330 aa3.66□□□□□ -1.82
RAP1B-201ENST00000250559 MRPL35Q9NZE8 188 aaKnown RBP3.66□□□□□ -1.82
RAP1B-201ENST00000250559 MRPL27Q9P0M9 148 aaKnown RBP3.66□□□□□ -1.82
RAP1B-201ENST00000250559 KLK5Q9Y337 293 aaPredicted RBP3.66□□□□□ -1.82
RAP1B-201ENST00000250559 ZNF318Q5VUA4 2279 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms