RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 GLMPQ8WWB7 406 aa19.3■□□□□ 0.68
TMEM55B-201ENST00000250489 PF4V1P10720 104 aa19.3■□□□□ 0.68
TMEM55B-201ENST00000250489 ZNF493Q6ZR52 646 aa19.3■□□□□ 0.68
TMEM55B-201ENST00000250489 CHCHD1Q96BP2 118 aaKnown RBP19.3■□□□□ 0.68
TMEM55B-201ENST00000250489 FAM181BA6NEQ2 426 aa19.29■□□□□ 0.68
TMEM55B-201ENST00000250489 IGLV1-40P01703 118 aa19.29■□□□□ 0.68
TMEM55B-201ENST00000250489 SRSF2Q01130 221 aaKnown RBP19.29■□□□□ 0.68
TMEM55B-201ENST00000250489 VAMP8Q9BV40 100 aa19.29■□□□□ 0.68
TMEM55B-201ENST00000250489 IGHV3-11P01762 117 aa19.28■□□□□ 0.68
TMEM55B-201ENST00000250489 C20orf144Q9BQM9 153 aa19.28■□□□□ 0.68
TMEM55B-201ENST00000250489 ZNF462Q96JM2 2506 aa19.28■□□□□ 0.68
TMEM55B-201ENST00000250489 CFHR3Q02985 330 aa19.27■□□□□ 0.68
TMEM55B-201ENST00000250489 DEFB112Q30KQ8 113 aa19.27■□□□□ 0.68
TMEM55B-201ENST00000250489 ZNF575Q86XF7 245 aa19.27■□□□□ 0.68
TMEM55B-201ENST00000250489 AGPAT4-IT1Q9H0P7 198 aa19.27■□□□□ 0.68
TMEM55B-201ENST00000250489 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.27■□□□□ 0.687e-8■■■□□ 17.2
TMEM55B-201ENST00000250489 ZFYVE26Q68DK2 2539 aa19.27■□□□□ 0.67
TMEM55B-201ENST00000250489 FABP5P3A8MUU1 101 aa19.26■□□□□ 0.67
TMEM55B-201ENST00000250489 J3QLI3 93 aa19.26■□□□□ 0.67
TMEM55B-201ENST00000250489 CTRLP40313 264 aa19.26■□□□□ 0.67
TMEM55B-201ENST00000250489 IL17RELQ6ZVW7 336 aa19.26■□□□□ 0.67
TMEM55B-201ENST00000250489 PAM16Q9Y3D7 125 aa19.26■□□□□ 0.67
TMEM55B-201ENST00000250489 CELSR2Q9HCU4 2923 aa19.26■□□□□ 0.67
TMEM55B-201ENST00000250489 TMEM213A2RRL7 107 aa19.26■□□□□ 0.67
TMEM55B-201ENST00000250489 SMAD7O15105 426 aaKnown RBP19.26■□□□□ 0.67
TMEM55B-201ENST00000250489 IGLC6P0CF74 106 aa19.26■□□□□ 0.67
TMEM55B-201ENST00000250489 EBLN2Q6P2I7 272 aa19.26■□□□□ 0.67
TMEM55B-201ENST00000250489 OR4X2Q8NGF9 303 aa19.26■□□□□ 0.67
TMEM55B-201ENST00000250489 PSMG3-AS1Q96PY0 264 aa19.26■□□□□ 0.67
TMEM55B-201ENST00000250489 IGHV4-59P01825 116 aa19.25■□□□□ 0.67
TMEM55B-201ENST00000250489 LINC00614P0C842 121 aa19.25■□□□□ 0.67
TMEM55B-201ENST00000250489 LCNL1Q6ZST4 164 aa19.25■□□□□ 0.67
TMEM55B-201ENST00000250489 FER1L6-AS1Q8NA97 138 aa19.25■□□□□ 0.67
TMEM55B-201ENST00000250489 MAPK1IP1LQ8NDC0 245 aa19.24■□□□□ 0.67
TMEM55B-201ENST00000250489 CLEC5AQ9NY25 188 aa19.24■□□□□ 0.67
TMEM55B-201ENST00000250489 ZNF580Q9UK33 172 aa19.24■□□□□ 0.67
TMEM55B-201ENST00000250489 CRYBG3Q68DQ2 2970 aa19.24■□□□□ 0.67
TMEM55B-201ENST00000250489 IGHV1-24A0A0C4DH33 117 aa19.24■□□□□ 0.67
TMEM55B-201ENST00000250489 A0A0G2JLM5 398 aa19.24■□□□□ 0.67
TMEM55B-201ENST00000250489 TGFAP01135 160 aa19.24■□□□□ 0.67
TMEM55B-201ENST00000250489 ORM1P02763 201 aa19.24■□□□□ 0.67
TMEM55B-201ENST00000250489 ZNF138P52744 262 aa19.24■□□□□ 0.67
TMEM55B-201ENST00000250489 DMRTA1Q5VZB9 504 aa19.24■□□□□ 0.67
TMEM55B-201ENST00000250489 C16orf92Q96LL3 132 aa19.24■□□□□ 0.67
TMEM55B-201ENST00000250489 UBR5O95071 2799 aaPredicted RBP19.23■□□□□ 0.67
TMEM55B-201ENST00000250489 C2orf70A6NJV1 201 aa19.23■□□□□ 0.67
TMEM55B-201ENST00000250489 PMCHL1Q16048 86 aa19.23■□□□□ 0.67
TMEM55B-201ENST00000250489 TMEM78Q5T7P6 136 aa19.23■□□□□ 0.67
TMEM55B-201ENST00000250489 C9orf139Q6ZV77 190 aa19.23■□□□□ 0.67
TMEM55B-201ENST00000250489 SSTP61278 116 aa19.23■□□□□ 0.67
TMEM55B-201ENST00000250489 LOXL1Q08397 574 aaPredicted RBP19.23■□□□□ 0.67
TMEM55B-201ENST00000250489 LINC01559Q495D7 138 aa19.23■□□□□ 0.67
TMEM55B-201ENST00000250489 C9orf47Q6ZRZ4 202 aa19.23■□□□□ 0.67
TMEM55B-201ENST00000250489 NPFFR1Q9GZQ6 430 aa19.22■□□□□ 0.67
TMEM55B-201ENST00000250489 FBN2P35556 2912 aa19.21■□□□□ 0.67
TMEM55B-201ENST00000250489 MUC21A0A0G2JKD1 596 aa19.21■□□□□ 0.67
TMEM55B-201ENST00000250489 MUC21A0A140T8X8 626 aa19.21■□□□□ 0.67
TMEM55B-201ENST00000250489 BTF3P20290 206 aaKnown RBP19.21■□□□□ 0.67
TMEM55B-201ENST00000250489 KRTAP10-9P60411 292 aa19.21■□□□□ 0.67
TMEM55B-201ENST00000250489 TMEM95Q3KNT9 176 aa19.21■□□□□ 0.67
TMEM55B-201ENST00000250489 MUC21Q5SSG8 566 aa19.21■□□□□ 0.67
TMEM55B-201ENST00000250489 FAM104BQ5XKR9 115 aa19.21■□□□□ 0.67
TMEM55B-201ENST00000250489 GPHB5Q86YW7 130 aa19.21■□□□□ 0.67
TMEM55B-201ENST00000250489 RNF223E7ERA6 249 aa19.2■□□□□ 0.66
TMEM55B-201ENST00000250489 RAB4AP20338 218 aa19.2■□□□□ 0.66
TMEM55B-201ENST00000250489 C20orf173Q96LM9 149 aa19.2■□□□□ 0.66
TMEM55B-201ENST00000250489 PPP1R14DQ9NXH3 145 aa19.2■□□□□ 0.66
TMEM55B-201ENST00000250489 CSN3P07498 182 aa19.19■□□□□ 0.66
TMEM55B-201ENST00000250489 AMN1Q8IY45 258 aa19.19■□□□□ 0.66
TMEM55B-201ENST00000250489 U3KQK5 164 aa19.19■□□□□ 0.66
TMEM55B-201ENST00000250489 HIST1H1AQ02539 215 aaPredicted RBP19.19■□□□□ 0.66
TMEM55B-201ENST00000250489 CYB5R2Q6BCY4 276 aa19.19■□□□□ 0.66
TMEM55B-201ENST00000250489 MIEN1Q9BRT3 115 aa19.19■□□□□ 0.66
TMEM55B-201ENST00000250489 SOCS3O14543 225 aa19.18■□□□□ 0.66
TMEM55B-201ENST00000250489 TWIST1Q15672 202 aa19.18■□□□□ 0.66
TMEM55B-201ENST00000250489 CNFNQ9BYD5 112 aa19.18■□□□□ 0.66
TMEM55B-201ENST00000250489 D6R8Y8 96 aa19.17■□□□□ 0.66
TMEM55B-201ENST00000250489 IGHV4-31P0DP07 118 aa19.17■□□□□ 0.66
TMEM55B-201ENST00000250489 ZNF738Q8NE65 137 aa19.17■□□□□ 0.66
TMEM55B-201ENST00000250489 C11orf21Q9P2W6 132 aa19.17■□□□□ 0.66
TMEM55B-201ENST00000250489 MAP1AP78559 2803 aaPredicted RBP19.17■□□□□ 0.66
TMEM55B-201ENST00000250489 ANKRD17O75179 2603 aaKnown RBP19.16■□□□□ 0.66
TMEM55B-201ENST00000250489 IGKV3D-20A0A0C4DH25 116 aa19.16■□□□□ 0.66
TMEM55B-201ENST00000250489 LEPROTL1O95214 131 aa19.16■□□□□ 0.66
TMEM55B-201ENST00000250489 FSHBP01225 129 aa19.16■□□□□ 0.66
TMEM55B-201ENST00000250489 MRPL51Q4U2R6 128 aaKnown RBP19.16■□□□□ 0.66
TMEM55B-201ENST00000250489 SPATA45Q537H7 98 aa19.16■□□□□ 0.66
TMEM55B-201ENST00000250489 TMEM70Q9BUB7 260 aa19.16■□□□□ 0.66
TMEM55B-201ENST00000250489 FAM208BQ5VWN6 2430 aa19.16■□□□□ 0.66
TMEM55B-201ENST00000250489 IGHV7-4-1A0A0J9YVY3 117 aa19.15■□□□□ 0.66
TMEM55B-201ENST00000250489 OR5AL1P0C617 328 aa19.15■□□□□ 0.66
TMEM55B-201ENST00000250489 PSMB8P28062 276 aa19.15■□□□□ 0.66
TMEM55B-201ENST00000250489 LINC00173Q6ZV60 143 aa19.15■□□□□ 0.66
TMEM55B-201ENST00000250489 BEX4Q9NWD9 120 aaPredicted RBP19.15■□□□□ 0.66
TMEM55B-201ENST00000250489 LBHQ53QV2 105 aaPredicted RBP19.15■□□□□ 0.66
TMEM55B-201ENST00000250489 SPATA12Q7Z6I5 190 aa19.15■□□□□ 0.66
TMEM55B-201ENST00000250489 LURAP1LQ8IV03 231 aa19.15■□□□□ 0.66
TMEM55B-201ENST00000250489 PEF1Q9UBV8 284 aaKnown RBP19.15■□□□□ 0.66
TMEM55B-201ENST00000250489 DEFB113Q30KQ7 82 aa19.14■□□□□ 0.65
TMEM55B-201ENST00000250489 TM4SF20Q53R12 229 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms