RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 TIMM8BQ9Y5J9 83 aaPredicted RBP15.04■□□□□ -0
CDC42EP1-201ENST00000249014 IFI27P40305 119 aaPredicted RBP15.04■□□□□ -0
CDC42EP1-201ENST00000249014 FER1L6-AS1Q8NA97 138 aa15.04■□□□□ -0
CDC42EP1-201ENST00000249014 PRSS3P2Q8NHM4 247 aa15.04■□□□□ -0
CDC42EP1-201ENST00000249014 LAMTOR2Q9Y2Q5 125 aa15.04■□□□□ -0
CDC42EP1-201ENST00000249014 U3KQK5 164 aa15.04■□□□□ -0
CDC42EP1-201ENST00000249014 CFAP46Q8IYW2 2715 aa15.03■□□□□ -0
CDC42EP1-201ENST00000249014 TRAV41A0A0B4J266 112 aa15.03■□□□□ -0
CDC42EP1-201ENST00000249014 TFPI2P48307 235 aa15.03■□□□□ -0
CDC42EP1-201ENST00000249014 MAP1LC3CQ9BXW4 147 aa15.03■□□□□ -0
CDC42EP1-201ENST00000249014 TRAV8-2A0A0B4J237 113 aa15.02■□□□□ -0
CDC42EP1-201ENST00000249014 ZNF25P17030 456 aaPredicted RBP15.02■□□□□ -0
CDC42EP1-201ENST00000249014 RPS20P60866 119 aaKnown RBP15.02■□□□□ -0
CDC42EP1-201ENST00000249014 ATP5G2Q06055 141 aa15.02■□□□□ -0
CDC42EP1-201ENST00000249014 MRPL51Q4U2R6 128 aaKnown RBP15.02■□□□□ -0
CDC42EP1-201ENST00000249014 SLC50A1Q9BRV3 221 aa15.02■□□□□ -0
CDC42EP1-201ENST00000249014 PIMREGQ9BSJ6 248 aa15.02■□□□□ -0
CDC42EP1-201ENST00000249014 hDV102S1A0JD36 115 aa15.02□□□□□ -0.01
CDC42EP1-201ENST00000249014 ORM1P02763 201 aa15.02□□□□□ -0.01
CDC42EP1-201ENST00000249014 LOXL1Q08397 574 aaPredicted RBP15.02□□□□□ -0.01
CDC42EP1-201ENST00000249014 CYB5R2Q6BCY4 276 aa15.02□□□□□ -0.01
CDC42EP1-201ENST00000249014 IL17RELQ6ZVW7 336 aa15.02□□□□□ -0.01
CDC42EP1-201ENST00000249014 FA2HQ7L5A8 372 aa15.02□□□□□ -0.01
CDC42EP1-201ENST00000249014 METTL26Q96S19 204 aa15.02□□□□□ -0.01
CDC42EP1-201ENST00000249014 CCL19Q99731 98 aa15.02□□□□□ -0.01
CDC42EP1-201ENST00000249014 TP73-AS1Q9UF72 201 aa15.02□□□□□ -0.01
CDC42EP1-201ENST00000249014 HSPB8Q9UJY1 196 aa15.02□□□□□ -0.01
CDC42EP1-201ENST00000249014 LOC389332A0A1B0GUA5 103 aa15.01□□□□□ -0.01
CDC42EP1-201ENST00000249014 H0Y8G0 127 aa15.01□□□□□ -0.01
CDC42EP1-201ENST00000249014 TWIST1Q15672 202 aa15.01□□□□□ -0.01
CDC42EP1-201ENST00000249014 STPG4Q8N801 248 aa15.01□□□□□ -0.01
CDC42EP1-201ENST00000249014 C10orf105Q8TEF2 133 aa15.01□□□□□ -0.01
CDC42EP1-201ENST00000249014 PRELID3AQ96N28 172 aa15.01□□□□□ -0.01
CDC42EP1-201ENST00000249014 SIGLEC8Q9NYZ4 499 aa15.01□□□□□ -0.01
CDC42EP1-201ENST00000249014 A0A096LNJ9 63 aa15.01□□□□□ -0.01
CDC42EP1-201ENST00000249014 RBAKDNA6NC62 111 aa15.01□□□□□ -0.01
CDC42EP1-201ENST00000249014 FABP5P3A8MUU1 101 aa15.01□□□□□ -0.01
CDC42EP1-201ENST00000249014 IGHV4-38-2P0DP08 117 aa15.01□□□□□ -0.01
CDC42EP1-201ENST00000249014 SRSF2Q01130 221 aaKnown RBP15.01□□□□□ -0.01
CDC42EP1-201ENST00000249014 PET117Q6UWS5 81 aa15.01□□□□□ -0.01
CDC42EP1-201ENST00000249014 ORMDL3Q8N138 153 aa15.01□□□□□ -0.01
CDC42EP1-201ENST00000249014 U3KQE9 123 aa15.01□□□□□ -0.01
CDC42EP1-201ENST00000249014 COL5A1-AS1Q5SY13 56 aa15□□□□□ -0.01
CDC42EP1-201ENST00000249014 ZNF747Q9BV97 191 aa15□□□□□ -0.01
CDC42EP1-201ENST00000249014 AGPAT4-IT1Q9H0P7 198 aa15□□□□□ -0.01
CDC42EP1-201ENST00000249014 MSRB1Q9NZV6 116 aa15□□□□□ -0.01
CDC42EP1-201ENST00000249014 MRPS16Q9Y3D3 137 aaKnown RBP15□□□□□ -0.01
CDC42EP1-201ENST00000249014 CRIP2P52943 208 aaPredicted RBP15□□□□□ -0.01
CDC42EP1-201ENST00000249014 C8orf86Q6ZUL3 223 aa15□□□□□ -0.01
CDC42EP1-201ENST00000249014 TMEM191AQ9H0A3 160 aa15□□□□□ -0.01
CDC42EP1-201ENST00000249014 MEGF9Q9H1U4 602 aa15□□□□□ -0.01
CDC42EP1-201ENST00000249014 SMKR1H3BMG3 65 aa14.99□□□□□ -0.01
CDC42EP1-201ENST00000249014 OR10AG1Q8NH19 301 aa14.99□□□□□ -0.01
CDC42EP1-201ENST00000249014 PMCHL2Q9BQD1 86 aa14.99□□□□□ -0.01
CDC42EP1-201ENST00000249014 TMEM208Q9BTX3 173 aa14.99□□□□□ -0.01
CDC42EP1-201ENST00000249014 TRGV3P03979 118 aa14.98□□□□□ -0.01
CDC42EP1-201ENST00000249014 FAM223BA6NKX1 122 aa14.98□□□□□ -0.01
CDC42EP1-201ENST00000249014 LINC01559Q495D7 138 aa14.98□□□□□ -0.01
CDC42EP1-201ENST00000249014 FAM223AQ8IWN6 122 aa14.98□□□□□ -0.01
CDC42EP1-201ENST00000249014 CNFNQ9BYD5 112 aa14.98□□□□□ -0.01
CDC42EP1-201ENST00000249014 ST20Q9HBF5 79 aa14.98□□□□□ -0.01
CDC42EP1-201ENST00000249014 PIEZO1Q92508 2521 aa14.97□□□□□ -0.01
CDC42EP1-201ENST00000249014 IGHV4-30-2A0A087WSY4 118 aa14.97□□□□□ -0.01
CDC42EP1-201ENST00000249014 TRBV12-3P01733 135 aa14.97□□□□□ -0.01
CDC42EP1-201ENST00000249014 LY6EQ16553 131 aa14.97□□□□□ -0.01
CDC42EP1-201ENST00000249014 LINC01545Q5VT33 79 aa14.97□□□□□ -0.01
CDC42EP1-201ENST00000249014 CELSR2Q9HCU4 2923 aa14.97□□□□□ -0.01
CDC42EP1-201ENST00000249014 NCR2O95944 276 aa14.97□□□□□ -0.01
CDC42EP1-201ENST00000249014 NPYP01303 97 aa14.97□□□□□ -0.01
CDC42EP1-201ENST00000249014 HINT1P49773 126 aaPredicted RBP14.97□□□□□ -0.01
CDC42EP1-201ENST00000249014 C11orf21Q9P2W6 132 aa14.97□□□□□ -0.01
CDC42EP1-201ENST00000249014 MAP1AP78559 2803 aaPredicted RBP14.96□□□□□ -0.01
CDC42EP1-201ENST00000249014 IGKV3D-20A0A0C4DH25 116 aa14.96□□□□□ -0.01
CDC42EP1-201ENST00000249014 PPIFP30405 207 aaKnown RBP14.96□□□□□ -0.01
CDC42EP1-201ENST00000249014 CKS2P33552 79 aa14.96□□□□□ -0.01
CDC42EP1-201ENST00000249014 ARL3P36405 182 aa14.95□□□□□ -0.02
CDC42EP1-201ENST00000249014 ATP5J2P56134 94 aa14.95□□□□□ -0.02
CDC42EP1-201ENST00000249014 UNQ9165/PRO28630Q6UXU0 137 aa14.95□□□□□ -0.02
CDC42EP1-201ENST00000249014 RNF185Q96GF1 192 aa14.95□□□□□ -0.02
CDC42EP1-201ENST00000249014 ATP6V0BQ99437 205 aa14.95□□□□□ -0.02
CDC42EP1-201ENST00000249014 FLNCQ14315 2725 aa14.95□□□□□ -0.02
CDC42EP1-201ENST00000249014 IGF1P05019 195 aa14.95□□□□□ -0.02
CDC42EP1-201ENST00000249014 FXYD7P58549 80 aa14.95□□□□□ -0.02
CDC42EP1-201ENST00000249014 NDUFS8O00217 210 aa14.94□□□□□ -0.02
CDC42EP1-201ENST00000249014 DLEU1O43261 78 aa14.94□□□□□ -0.02
CDC42EP1-201ENST00000249014 CLEC2AQ6UVW9 174 aa14.94□□□□□ -0.02
CDC42EP1-201ENST00000249014 GLMPQ8WWB7 406 aa14.94□□□□□ -0.02
CDC42EP1-201ENST00000249014 MRPL53Q96EL3 112 aaKnown RBP14.94□□□□□ -0.02
CDC42EP1-201ENST00000249014 CACNA1AO00555 2505 aa14.94□□□□□ -0.02
CDC42EP1-201ENST00000249014 H3BUX3 64 aa14.94□□□□□ -0.02
CDC42EP1-201ENST00000249014 GAS8-AS1O95177 125 aa14.94□□□□□ -0.02
CDC42EP1-201ENST00000249014 TMEM78Q5T7P6 136 aa14.94□□□□□ -0.02
CDC42EP1-201ENST00000249014 PRSS57Q6UWY2 283 aa14.94□□□□□ -0.02
CDC42EP1-201ENST00000249014 Q6ZQT7 251 aa14.94□□□□□ -0.02
CDC42EP1-201ENST00000249014 SMAD7O15105 426 aaKnown RBP14.93□□□□□ -0.02
CDC42EP1-201ENST00000249014 SPG11Q96JI7 2443 aa14.93□□□□□ -0.02
CDC42EP1-201ENST00000249014 IGSF10Q6WRI0 2623 aa14.93□□□□□ -0.02
CDC42EP1-201ENST00000249014 HSBP1L1C9JCN9 74 aa14.92□□□□□ -0.02
CDC42EP1-201ENST00000249014 C9orf47Q6ZRZ4 202 aa14.92□□□□□ -0.02
CDC42EP1-201ENST00000249014 Q6ZS46 218 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms