RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 LRP4O75096 1905 aa7.4□□□□□ -1.22
COL21A1-201ENST00000244728 K7EP13 123 aa7.4□□□□□ -1.22
COL21A1-201ENST00000244728 DPM2O94777 84 aa7.4□□□□□ -1.22
COL21A1-201ENST00000244728 NDUFB8O95169 186 aa7.4□□□□□ -1.22
COL21A1-201ENST00000244728 PSMB11A5LHX3 300 aa7.4□□□□□ -1.23
COL21A1-201ENST00000244728 GATA4P43694 442 aa7.4□□□□□ -1.23
COL21A1-201ENST00000244728 RRN3P1Q2M238 152 aa7.4□□□□□ -1.23
COL21A1-201ENST00000244728 ZNF418Q8TF45 676 aaPredicted RBP7.4□□□□□ -1.23
COL21A1-201ENST00000244728 ZC2HC1AQ96GY0 325 aa7.4□□□□□ -1.23
COL21A1-201ENST00000244728 ZNF256Q9Y2P7 627 aaPredicted RBP7.4□□□□□ -1.23
COL21A1-201ENST00000244728 ACANP16112 2415 aa7.39□□□□□ -1.23
COL21A1-201ENST00000244728 NPFFO15130 113 aa7.39□□□□□ -1.23
COL21A1-201ENST00000244728 IGKCP01834 107 aa7.39□□□□□ -1.23
COL21A1-201ENST00000244728 SEM1Q6ZVN7 128 aa7.39□□□□□ -1.23
COL21A1-201ENST00000244728 ZNF688P0C7X2 276 aa7.39□□□□□ -1.23
COL21A1-201ENST00000244728 RAX2Q96IS3 184 aa7.39□□□□□ -1.23
COL21A1-201ENST00000244728 PRO3102Q9H379 93 aa7.39□□□□□ -1.23
COL21A1-201ENST00000244728 C9orf118A6NHY6 69 aa7.39□□□□□ -1.23
COL21A1-201ENST00000244728 PSG3Q16557 428 aa7.39□□□□□ -1.23
COL21A1-201ENST00000244728 MSMPQ1L6U9 139 aa7.39□□□□□ -1.23
COL21A1-201ENST00000244728 FAM167A-AS1Q96KT0 104 aa7.39□□□□□ -1.23
COL21A1-201ENST00000244728 SPOCK3Q9BQ16 436 aa7.39□□□□□ -1.23
COL21A1-201ENST00000244728 NPFFR1Q9GZQ6 430 aa7.39□□□□□ -1.23
COL21A1-201ENST00000244728 NXT2Q9NPJ8 142 aaKnown RBP7.39□□□□□ -1.23
COL21A1-201ENST00000244728 CTSZQ9UBR2 303 aa7.39□□□□□ -1.23
COL21A1-201ENST00000244728 FLNBO75369 2602 aaKnown RBP7.39□□□□□ -1.23
COL21A1-201ENST00000244728 H3BRM9 83 aa7.38□□□□□ -1.23
COL21A1-201ENST00000244728 SH2D1AO60880 128 aa7.38□□□□□ -1.23
COL21A1-201ENST00000244728 APOMO95445 188 aa7.38□□□□□ -1.23
COL21A1-201ENST00000244728 PF4P02776 101 aa7.38□□□□□ -1.23
COL21A1-201ENST00000244728 CD7P09564 240 aa7.38□□□□□ -1.23
COL21A1-201ENST00000244728 CTRLP40313 264 aa7.38□□□□□ -1.23
COL21A1-201ENST00000244728 LINC00310P59036 64 aa7.38□□□□□ -1.23
COL21A1-201ENST00000244728 PSMG4Q5JS54 123 aa7.38□□□□□ -1.23
COL21A1-201ENST00000244728 ZNF503Q96F45 646 aa7.38□□□□□ -1.23
COL21A1-201ENST00000244728 TAX1BP3O14907 124 aa7.38□□□□□ -1.23
COL21A1-201ENST00000244728 CRXO43186 299 aaPredicted RBP7.38□□□□□ -1.23
COL21A1-201ENST00000244728 PPBPP02775 128 aa7.38□□□□□ -1.23
COL21A1-201ENST00000244728 ZC2HC1BQ5TFG8 222 aa7.38□□□□□ -1.23
COL21A1-201ENST00000244728 RNF223E7ERA6 249 aa7.38□□□□□ -1.23
COL21A1-201ENST00000244728 ASIPP42127 132 aa7.38□□□□□ -1.23
COL21A1-201ENST00000244728 SP5Q6BEB4 398 aaPredicted RBP7.38□□□□□ -1.23
COL21A1-201ENST00000244728 PATE2Q6UY27 113 aa7.38□□□□□ -1.23
COL21A1-201ENST00000244728 LCNL1Q6ZST4 164 aa7.38□□□□□ -1.23
COL21A1-201ENST00000244728 SYT8Q8NBV8 401 aa7.38□□□□□ -1.23
COL21A1-201ENST00000244728 SCGB3A1Q96QR1 104 aa7.38□□□□□ -1.23
COL21A1-201ENST00000244728 PRSS22Q9GZN4 317 aa7.38□□□□□ -1.23
COL21A1-201ENST00000244728 C22orf46C9J442 243 aa7.38□□□□□ -1.23
COL21A1-201ENST00000244728 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.38□□□□□ -1.23
COL21A1-201ENST00000244728 PAX1P15863 534 aa7.38□□□□□ -1.23
COL21A1-201ENST00000244728 PRRC2AP48634 2157 aaKnown RBP7.37□□□□□ -1.23
COL21A1-201ENST00000244728 C2orf70A6NJV1 201 aa7.37□□□□□ -1.23
COL21A1-201ENST00000244728 B4DSR2 109 aa7.37□□□□□ -1.23
COL21A1-201ENST00000244728 SAP30O75446 220 aa7.37□□□□□ -1.23
COL21A1-201ENST00000244728 ZNF833PQ6ZTB9 187 aa7.37□□□□□ -1.23
COL21A1-201ENST00000244728 KIR2DL4Q99706 377 aa7.37□□□□□ -1.23
COL21A1-201ENST00000244728 ZNF747Q9BV97 191 aa7.37□□□□□ -1.23
COL21A1-201ENST00000244728 IGLV2-8P01709 118 aa7.37□□□□□ -1.23
COL21A1-201ENST00000244728 MOB4Q9Y3A3 225 aa7.37□□□□□ -1.23
COL21A1-201ENST00000244728 TMEM170BQ5T4T1 132 aa7.37□□□□□ -1.23
COL21A1-201ENST00000244728 C8orf49Q96NF6 230 aa7.37□□□□□ -1.23
COL21A1-201ENST00000244728 DUX3Q96PT4 197 aa7.37□□□□□ -1.23
COL21A1-201ENST00000244728 KIAA1549Q9HCM3 1950 aa7.37□□□□□ -1.23
COL21A1-201ENST00000244728 SIGLEC8Q9NYZ4 499 aa7.37□□□□□ -1.23
COL21A1-201ENST00000244728 DSCAML1Q8TD84 2053 aa7.37□□□□□ -1.23
COL21A1-201ENST00000244728 EIF4EBP1Q13541 118 aaPredicted RBP7.36□□□□□ -1.23
COL21A1-201ENST00000244728 UTF1Q5T230 341 aa7.36□□□□□ -1.23
COL21A1-201ENST00000244728 GDF5OSQ5U4N7 250 aa7.36□□□□□ -1.23
COL21A1-201ENST00000244728 IGFL2Q6UWQ7 119 aa7.36□□□□□ -1.23
COL21A1-201ENST00000244728 ADAMTSL5Q6ZMM2 481 aa7.36□□□□□ -1.23
COL21A1-201ENST00000244728 CHAC1Q9BUX1 264 aa7.36□□□□□ -1.23
COL21A1-201ENST00000244728 C10orf142B7Z368 130 aa7.36□□□□□ -1.23
COL21A1-201ENST00000244728 PRSS46E5RG02 174 aa7.36□□□□□ -1.23
COL21A1-201ENST00000244728 K7EP34 96 aa7.36□□□□□ -1.23
COL21A1-201ENST00000244728 ATP6V0E1O15342 81 aa7.36□□□□□ -1.23
COL21A1-201ENST00000244728 PRB1P04280 392 aa7.36□□□□□ -1.23
COL21A1-201ENST00000244728 GAGE13Q4V321 117 aa7.36□□□□□ -1.23
COL21A1-201ENST00000244728 FAM104BQ5XKR9 115 aa7.36□□□□□ -1.23
COL21A1-201ENST00000244728 GTSF1Q8WW33 167 aa7.36□□□□□ -1.23
COL21A1-201ENST00000244728 DSCAMO60469 2012 aa7.36□□□□□ -1.23
COL21A1-201ENST00000244728 LTAP01374 205 aa7.36□□□□□ -1.23
COL21A1-201ENST00000244728 MINOS1Q5TGZ0 78 aa7.36□□□□□ -1.23
COL21A1-201ENST00000244728 LINC01587Q99440 93 aa7.36□□□□□ -1.23
COL21A1-201ENST00000244728 NCOR1P1Q9H4R4 102 aa7.36□□□□□ -1.23
COL21A1-201ENST00000244728 MINOS1-NBL1R4GNA1 71 aa7.36□□□□□ -1.23
COL21A1-201ENST00000244728 NPIPB6E9PJ23 425 aa7.36□□□□□ -1.23
COL21A1-201ENST00000244728 M0R1W7 72 aa7.36□□□□□ -1.23
COL21A1-201ENST00000244728 OVOL3O00110 214 aa7.36□□□□□ -1.23
COL21A1-201ENST00000244728 ZNF562Q6V9R5 426 aa7.36□□□□□ -1.23
COL21A1-201ENST00000244728 THAP8Q8NA92 274 aa7.36□□□□□ -1.23
COL21A1-201ENST00000244728 TMEM158Q8WZ71 300 aa7.36□□□□□ -1.23
COL21A1-201ENST00000244728 BEX4Q9NWD9 120 aaPredicted RBP7.36□□□□□ -1.23
COL21A1-201ENST00000244728 SHISA9B4DS77 424 aa7.35□□□□□ -1.23
COL21A1-201ENST00000244728 FCN3O75636 299 aa7.35□□□□□ -1.23
COL21A1-201ENST00000244728 ANKRD39Q53RE8 183 aa7.35□□□□□ -1.23
COL21A1-201ENST00000244728 SIGLEC15Q6ZMC9 328 aa7.35□□□□□ -1.23
COL21A1-201ENST00000244728 C22orf34Q6ZV56 151 aa7.35□□□□□ -1.23
COL21A1-201ENST00000244728 MTURNQ8N3F0 131 aa7.35□□□□□ -1.23
COL21A1-201ENST00000244728 Q8N7P7 452 aa7.35□□□□□ -1.23
COL21A1-201ENST00000244728 SHANK2-AS3Q9BTD1 123 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms