RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 TRBV7-1A0A0A6YYK4 115 aa16.93■□□□□ 0.3
RNF39-201ENST00000244360 IGHV3-35A0A0C4DH35 117 aa16.93■□□□□ 0.3
RNF39-201ENST00000244360 SH2D1AO60880 128 aa16.93■□□□□ 0.3
RNF39-201ENST00000244360 RELQ04864 619 aaPredicted RBP16.93■□□□□ 0.3
RNF39-201ENST00000244360 CFAP46Q8IYW2 2715 aa16.93■□□□□ 0.3
RNF39-201ENST00000244360 LYZL1Q6UWQ5 148 aa16.93■□□□□ 0.3
RNF39-201ENST00000244360 PRR25Q96S07 402 aa16.93■□□□□ 0.3
RNF39-201ENST00000244360 ATP6V0BQ99437 205 aa16.93■□□□□ 0.3
RNF39-201ENST00000244360 MEGF9Q9H1U4 602 aa16.93■□□□□ 0.3
RNF39-201ENST00000244360 CSMD1Q96PZ7 3565 aa16.92■□□□□ 0.3
RNF39-201ENST00000244360 IGHV3OR16-8A0A075B7F1 116 aa16.92■□□□□ 0.3
RNF39-201ENST00000244360 CCL25O15444 150 aa16.92■□□□□ 0.3
RNF39-201ENST00000244360 MPV17L2Q567V2 206 aa16.92■□□□□ 0.3
RNF39-201ENST00000244360 FAM104BQ5XKR9 115 aa16.92■□□□□ 0.3
RNF39-201ENST00000244360 CLEC19AQ6UXS0 136 aa16.92■□□□□ 0.3
RNF39-201ENST00000244360 TMEM219Q86XT9 240 aa16.92■□□□□ 0.3
RNF39-201ENST00000244360 BMI1P35226 326 aa16.92■□□□□ 0.3
RNF39-201ENST00000244360 HIST1H1AQ02539 215 aaPredicted RBP16.92■□□□□ 0.3
RNF39-201ENST00000244360 ORMDL3Q8N138 153 aa16.92■□□□□ 0.3
RNF39-201ENST00000244360 DPF1Q92782 380 aa16.92■□□□□ 0.3
RNF39-201ENST00000244360 IGHV3OR16-10A0A075B7F0 116 aa16.91■□□□□ 0.3
RNF39-201ENST00000244360 BVES-AS1Q5T3Y7 98 aa16.91■□□□□ 0.3
RNF39-201ENST00000244360 TRAV40A0A0B4J280 105 aa16.9■□□□□ 0.3
RNF39-201ENST00000244360 SRSF2Q01130 221 aaKnown RBP16.9■□□□□ 0.3
RNF39-201ENST00000244360 TRAV41A0A0B4J266 112 aa16.9■□□□□ 0.3
RNF39-201ENST00000244360 D6R8Y8 96 aa16.9■□□□□ 0.3
RNF39-201ENST00000244360 H0Y8G0 127 aa16.9■□□□□ 0.3
RNF39-201ENST00000244360 NUDT3O95989 172 aa16.9■□□□□ 0.3
RNF39-201ENST00000244360 HLA-DMBP28068 263 aa16.9■□□□□ 0.3
RNF39-201ENST00000244360 CLEC2AQ6UVW9 174 aa16.9■□□□□ 0.3
RNF39-201ENST00000244360 PRELID3AQ96N28 172 aa16.9■□□□□ 0.3
RNF39-201ENST00000244360 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.89■□□□□ 0.29
RNF39-201ENST00000244360 VGLL1Q99990 258 aa16.89■□□□□ 0.29
RNF39-201ENST00000244360 COX8AP10176 69 aa16.89■□□□□ 0.29
RNF39-201ENST00000244360 IFI27P40305 119 aaPredicted RBP16.89■□□□□ 0.29
RNF39-201ENST00000244360 IGFL4Q6B9Z1 124 aa16.89■□□□□ 0.29
RNF39-201ENST00000244360 BRD3OSQ6XYD6 125 aa16.89■□□□□ 0.29
RNF39-201ENST00000244360 SIGLEC8Q9NYZ4 499 aa16.89■□□□□ 0.29
RNF39-201ENST00000244360 TIMM8BQ9Y5J9 83 aaPredicted RBP16.89■□□□□ 0.29
RNF39-201ENST00000244360 FAM223BA6NKX1 122 aa16.88■□□□□ 0.29
RNF39-201ENST00000244360 ATP5G2Q06055 141 aa16.88■□□□□ 0.29
RNF39-201ENST00000244360 FAM223AQ8IWN6 122 aa16.88■□□□□ 0.29
RNF39-201ENST00000244360 DEFB125Q8N687 156 aa16.88■□□□□ 0.29
RNF39-201ENST00000244360 DOPEY1Q5JWR5 2465 aa16.88■□□□□ 0.29
RNF39-201ENST00000244360 SLC50A1Q9BRV3 221 aa16.88■□□□□ 0.29
RNF39-201ENST00000244360 U3KQE9 123 aa16.88■□□□□ 0.29
RNF39-201ENST00000244360 CACNA1BQ00975 2339 aa16.87■□□□□ 0.29
RNF39-201ENST00000244360 TMEM213A2RRL7 107 aa16.87■□□□□ 0.29
RNF39-201ENST00000244360 ATP5J2P56134 94 aa16.87■□□□□ 0.29
RNF39-201ENST00000244360 Q6ZVH6 145 aa16.87■□□□□ 0.29
RNF39-201ENST00000244360 Q8TAT8 98 aa16.87■□□□□ 0.29
RNF39-201ENST00000244360 SPTAN1Q13813 2472 aaKnown RBP16.86■□□□□ 0.29
RNF39-201ENST00000244360 IGHV4-30-2A0A087WSY4 118 aa16.86■□□□□ 0.29
RNF39-201ENST00000244360 TMSB15BA0A087X1C1 80 aa16.86■□□□□ 0.29
RNF39-201ENST00000244360 RBAKDNA6NC62 111 aa16.86■□□□□ 0.29
RNF39-201ENST00000244360 AMN1Q8IY45 258 aa16.86■□□□□ 0.29
RNF39-201ENST00000244360 FER1L6-AS1Q8NA97 138 aa16.86■□□□□ 0.29
RNF39-201ENST00000244360 TP73-AS1Q9UF72 201 aa16.86■□□□□ 0.29
RNF39-201ENST00000244360 IGHV4-38-2P0DP08 117 aa16.86■□□□□ 0.29
RNF39-201ENST00000244360 LGALS9BQ3B8N2 356 aa16.86■□□□□ 0.29
RNF39-201ENST00000244360 MRPL51Q4U2R6 128 aaKnown RBP16.86■□□□□ 0.29
RNF39-201ENST00000244360 LGALS9CQ6DKI2 356 aa16.86■□□□□ 0.29
RNF39-201ENST00000244360 METTL26Q96S19 204 aa16.86■□□□□ 0.29
RNF39-201ENST00000244360 MCRIP2Q9BUT9 160 aaKnown RBP16.86■□□□□ 0.29
RNF39-201ENST00000244360 A0A096LNJ9 63 aa16.85■□□□□ 0.29
RNF39-201ENST00000244360 IGF1P05019 195 aa16.85■□□□□ 0.29
RNF39-201ENST00000244360 ZNF80P51504 273 aaPredicted RBP16.85■□□□□ 0.29
RNF39-201ENST00000244360 OR1N2Q8NGR9 330 aa16.85■□□□□ 0.29
RNF39-201ENST00000244360 TAX1BP3O14907 124 aa16.85■□□□□ 0.29
RNF39-201ENST00000244360 HBDP02042 147 aa16.85■□□□□ 0.29
RNF39-201ENST00000244360 IGLC6P0CF74 106 aa16.85■□□□□ 0.29
RNF39-201ENST00000244360 SVEP1Q4LDE5 3571 aa16.84■□□□□ 0.29
RNF39-201ENST00000244360 K7EP13 123 aa16.84■□□□□ 0.29
RNF39-201ENST00000244360 BRI3O95415 125 aa16.84■□□□□ 0.29
RNF39-201ENST00000244360 PSMG3-AS1Q96PY0 264 aa16.84■□□□□ 0.29
RNF39-201ENST00000244360 SPOCK3Q9BQ16 436 aa16.84■□□□□ 0.29
RNF39-201ENST00000244360 NPFFR1Q9GZQ6 430 aa16.84■□□□□ 0.29
RNF39-201ENST00000244360 CD5LO43866 347 aa16.84■□□□□ 0.29
RNF39-201ENST00000244360 VAMP3Q15836 100 aa16.84■□□□□ 0.29
RNF39-201ENST00000244360 IGSF10Q6WRI0 2623 aa16.83■□□□□ 0.28
RNF39-201ENST00000244360 LOC389332A0A1B0GUA5 103 aa16.83■□□□□ 0.28
RNF39-201ENST00000244360 A6NDX4 124 aa16.83■□□□□ 0.28
RNF39-201ENST00000244360 PRAC2D3DTV9 90 aa16.83■□□□□ 0.28
RNF39-201ENST00000244360 NCR2O95944 276 aa16.83■□□□□ 0.28
RNF39-201ENST00000244360 MSMBP08118 114 aa16.83■□□□□ 0.28
RNF39-201ENST00000244360 OR4C5Q8NGB2 326 aa16.83■□□□□ 0.28
RNF39-201ENST00000244360 OR8A1Q8NGG7 326 aa16.83■□□□□ 0.28
RNF39-201ENST00000244360 MRPL53Q96EL3 112 aaKnown RBP16.83■□□□□ 0.28
RNF39-201ENST00000244360 IGHV3-66A0A0C4DH42 116 aa16.82■□□□□ 0.28
RNF39-201ENST00000244360 MUC21A0A0G2JKD1 596 aa16.82■□□□□ 0.28
RNF39-201ENST00000244360 MUC21A0A140T8X8 626 aa16.82■□□□□ 0.28
RNF39-201ENST00000244360 TWIST1Q15672 202 aa16.82■□□□□ 0.28
RNF39-201ENST00000244360 MUC21Q5SSG8 566 aa16.82■□□□□ 0.28
RNF39-201ENST00000244360 ZNF575Q86XF7 245 aa16.82■□□□□ 0.28
RNF39-201ENST00000244360 CKS2P33552 79 aa16.82■□□□□ 0.28
RNF39-201ENST00000244360 FAM106AQ4KMX7 169 aa16.82■□□□□ 0.28
RNF39-201ENST00000244360 RNF182Q8N6D2 247 aa16.82■□□□□ 0.28
RNF39-201ENST00000244360 CNFNQ9BYD5 112 aa16.82■□□□□ 0.28
RNF39-201ENST00000244360 TRAV8-2A0A0B4J237 113 aa16.81■□□□□ 0.28
RNF39-201ENST00000244360 PPBPP02775 128 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms