RNA–Protein interactions for RNA: ENST00000243662.10

RAB38-201, Transcript of RAB38, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB38, Length 1,465 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38-201ENST00000243662 SMPXQ9UHP9 88 aa11.73□□□□□ -0.53
RAB38-201ENST00000243662 KLF12Q9Y4X4 402 aa11.73□□□□□ -0.53
RAB38-201ENST00000243662 IGHV7-4-1A0A0J9YVY3 117 aa11.72□□□□□ -0.53
RAB38-201ENST00000243662 IZUMO1RA6ND01 250 aa11.72□□□□□ -0.53
RAB38-201ENST00000243662 SLC17A3O00476 420 aa11.72□□□□□ -0.53
RAB38-201ENST00000243662 NBEAP1P0C6P0 100 aa11.72□□□□□ -0.53
RAB38-201ENST00000243662 RD3LP0DJH9 198 aa11.72□□□□□ -0.53
RAB38-201ENST00000243662 DEFA6Q01524 100 aa11.72□□□□□ -0.53
RAB38-201ENST00000243662 OR5I1Q13606 314 aa11.72□□□□□ -0.53
RAB38-201ENST00000243662 TMEM183BQ1AE95 376 aa11.72□□□□□ -0.53
RAB38-201ENST00000243662 CD300EQ496F6 205 aaPredicted RBP11.72□□□□□ -0.53
RAB38-201ENST00000243662 DYNLRB2Q8TF09 96 aa11.72□□□□□ -0.53
RAB38-201ENST00000243662 GNB1LQ9BYB4 327 aa11.72□□□□□ -0.53
RAB38-201ENST00000243662 EPDR1Q9UM22 224 aa11.72□□□□□ -0.53
RAB38-201ENST00000243662 WI2-2373I1.2A0A1W2PRP0 233 aa11.71□□□□□ -0.53
RAB38-201ENST00000243662 SMIM27A0A1W2PRY6 76 aa11.71□□□□□ -0.53
RAB38-201ENST00000243662 AMBPP02760 352 aa11.71□□□□□ -0.53
RAB38-201ENST00000243662 PRB2P02812 416 aaPredicted RBP11.71□□□□□ -0.53
RAB38-201ENST00000243662 GP9P14770 177 aa11.71□□□□□ -0.53
RAB38-201ENST00000243662 PDZD11Q5EBL8 140 aa11.71□□□□□ -0.53
RAB38-201ENST00000243662 IBA57Q5T440 356 aaKnown RBP11.71□□□□□ -0.53
RAB38-201ENST00000243662 C5orf17Q8NAS9 161 aa11.71□□□□□ -0.53
RAB38-201ENST00000243662 TMEM18Q96B42 140 aa11.71□□□□□ -0.53
RAB38-201ENST00000243662 ZNF256Q9Y2P7 627 aaPredicted RBP11.71□□□□□ -0.53
RAB38-201ENST00000243662 CHEK1O14757 476 aa11.7□□□□□ -0.54
RAB38-201ENST00000243662 APOHP02749 345 aaPredicted RBP11.7□□□□□ -0.54
RAB38-201ENST00000243662 IL4P05112 153 aa11.7□□□□□ -0.54
RAB38-201ENST00000243662 USF2Q15853 346 aaPredicted RBP11.7□□□□□ -0.54
RAB38-201ENST00000243662 RASL11AQ6T310 242 aa11.7□□□□□ -0.54
RAB38-201ENST00000243662 BAGE2Q86Y30 109 aa11.7□□□□□ -0.54
RAB38-201ENST00000243662 U3KQE9 123 aa11.7□□□□□ -0.54
RAB38-201ENST00000243662 ZNF785A8K8V0 405 aa11.7□□□□□ -0.54
RAB38-201ENST00000243662 SLC25A5P05141 298 aaKnown RBP11.7□□□□□ -0.54
RAB38-201ENST00000243662 MGST1P10620 155 aaKnown RBP11.7□□□□□ -0.54
RAB38-201ENST00000243662 JOSD1Q15040 202 aaPredicted RBP11.7□□□□□ -0.54
RAB38-201ENST00000243662 LCN12Q6JVE5 192 aa11.7□□□□□ -0.54
RAB38-201ENST00000243662 TMEM61Q8N0U2 210 aa11.7□□□□□ -0.54
RAB38-201ENST00000243662 RNF125Q96EQ8 232 aa11.7□□□□□ -0.54
RAB38-201ENST00000243662 FMC1Q96HJ9 113 aa11.7□□□□□ -0.54
RAB38-201ENST00000243662 ATG101Q9BSB4 218 aa11.7□□□□□ -0.54
RAB38-201ENST00000243662 RHPN1-AS1Q9BWJ2 59 aa11.7□□□□□ -0.54
RAB38-201ENST00000243662 SELENOKQ9Y6D0 94 aa11.7□□□□□ -0.54
RAB38-201ENST00000243662 IGHV3-49A0A0A0MS15 119 aa11.69□□□□□ -0.54
RAB38-201ENST00000243662 HIST1H1EP10412 219 aaKnown RBP11.69□□□□□ -0.54
RAB38-201ENST00000243662 UBE2G1P62253 170 aa11.69□□□□□ -0.54
RAB38-201ENST00000243662 RANP62826 216 aaKnown RBP11.69□□□□□ -0.54
RAB38-201ENST00000243662 CTAG1AP78358 180 aa11.69□□□□□ -0.54
RAB38-201ENST00000243662 OR8I2Q8N0Y5 310 aa11.69□□□□□ -0.54
RAB38-201ENST00000243662 GBGT1Q8N5D6 347 aa11.69□□□□□ -0.54
RAB38-201ENST00000243662 PRR25Q96S07 402 aa11.69□□□□□ -0.54
RAB38-201ENST00000243662 METTL26Q96S19 204 aa11.69□□□□□ -0.54
RAB38-201ENST00000243662 SLC25A39Q9BZJ4 359 aaPredicted RBP11.69□□□□□ -0.54
RAB38-201ENST00000243662 MRPL18Q9H0U6 180 aaKnown RBP11.69□□□□□ -0.54
RAB38-201ENST00000243662 RNASE7Q9H1E1 156 aaKnown RBP11.69□□□□□ -0.54
RAB38-201ENST00000243662 OTORQ9NRC9 128 aa11.69□□□□□ -0.54
RAB38-201ENST00000243662 TRAV25A0A0B4J276 109 aa11.68□□□□□ -0.54
RAB38-201ENST00000243662 PGPA6NDG6 321 aa11.68□□□□□ -0.54
RAB38-201ENST00000243662 K7EIL1 84 aa11.68□□□□□ -0.54
RAB38-201ENST00000243662 LYZP61626 148 aa11.68□□□□□ -0.54
RAB38-201ENST00000243662 GRAMD2BQ96HH9 432 aa11.68□□□□□ -0.54
RAB38-201ENST00000243662 GPR82Q96P67 336 aa11.68□□□□□ -0.54
RAB38-201ENST00000243662 SHANK2-AS3Q9BTD1 123 aa11.68□□□□□ -0.54
RAB38-201ENST00000243662 IGHV3OR16-13A0A075B7E8 117 aa11.67□□□□□ -0.54
RAB38-201ENST00000243662 IGHV3-74A0A0B4J1X5 117 aa11.67□□□□□ -0.54
RAB38-201ENST00000243662 TRBV6-1A0A0K0K1D8 114 aa11.67□□□□□ -0.54
RAB38-201ENST00000243662 ZNF705GA8MUZ8 300 aaPredicted RBP11.67□□□□□ -0.54
RAB38-201ENST00000243662 GATCO43716 136 aaKnown RBP11.67□□□□□ -0.54
RAB38-201ENST00000243662 LYPD1Q8N2G4 141 aa11.67□□□□□ -0.54
RAB38-201ENST00000243662 BLNKQ8WV28 456 aa11.67□□□□□ -0.54
RAB38-201ENST00000243662 HLA-DQA1P01909 254 aa11.66□□□□□ -0.54
RAB38-201ENST00000243662 ESDP10768 282 aa11.66□□□□□ -0.54
RAB38-201ENST00000243662 Q0VG73 95 aa11.66□□□□□ -0.54
RAB38-201ENST00000243662 Q9H3A6 140 aa11.66□□□□□ -0.54
RAB38-201ENST00000243662 RABAC1Q9UI14 185 aa11.66□□□□□ -0.54
RAB38-201ENST00000243662 A0A1W2PS18 150 aa11.65□□□□□ -0.54
RAB38-201ENST00000243662 H3BRN7 92 aa11.65□□□□□ -0.54
RAB38-201ENST00000243662 BUB3O43684 328 aa11.65□□□□□ -0.54
RAB38-201ENST00000243662 LTAP01374 205 aa11.65□□□□□ -0.54
RAB38-201ENST00000243662 TCRAP04437 139 aa11.65□□□□□ -0.54
RAB38-201ENST00000243662 CRISP2P16562 243 aa11.65□□□□□ -0.54
RAB38-201ENST00000243662 BMI1P35226 326 aa11.65□□□□□ -0.54
RAB38-201ENST00000243662 PAFAH1B2P68402 229 aa11.65□□□□□ -0.54
RAB38-201ENST00000243662 BPIFA4PQ86YQ2 179 aa11.65□□□□□ -0.54
RAB38-201ENST00000243662 Q8N1Y9 231 aa11.65□□□□□ -0.54
RAB38-201ENST00000243662 LINC00479Q96M42 142 aa11.65□□□□□ -0.54
RAB38-201ENST00000243662 ZNF492Q9P255 531 aa11.65□□□□□ -0.54
RAB38-201ENST00000243662 IGHV3-66A0A0C4DH42 116 aa11.64□□□□□ -0.55
RAB38-201ENST00000243662 SNURFLB1AK76 121 aa11.64□□□□□ -0.55
RAB38-201ENST00000243662 LINC00587B1AMM8 73 aa11.64□□□□□ -0.55
RAB38-201ENST00000243662 S100A7P31151 101 aa11.64□□□□□ -0.55
RAB38-201ENST00000243662 CT83Q5H943 113 aa11.64□□□□□ -0.55
RAB38-201ENST00000243662 C16orf54Q6UWD8 224 aa11.64□□□□□ -0.55
RAB38-201ENST00000243662 TMEM136Q6ZRR5 245 aa11.64□□□□□ -0.55
RAB38-201ENST00000243662 NUDT10Q8NFP7 164 aa11.64□□□□□ -0.55
RAB38-201ENST00000243662 GLMPQ8WWB7 406 aa11.64□□□□□ -0.55
RAB38-201ENST00000243662 NUDT11Q96G61 164 aa11.64□□□□□ -0.55
RAB38-201ENST00000243662 SPAG8Q99932 426 aaPredicted RBP11.64□□□□□ -0.55
RAB38-201ENST00000243662 MLST8Q9BVC4 326 aa11.64□□□□□ -0.55
RAB38-201ENST00000243662 NAT8BQ9UHF3 227 aa11.64□□□□□ -0.55
RAB38-201ENST00000243662 TRAV34A0A0B4J273 112 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms