RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 FXYD7P58549 80 aa8.2□□□□□ -1.1
SF3B6-201ENST00000233468 TMEM78Q5T7P6 136 aa8.2□□□□□ -1.1
SF3B6-201ENST00000233468 AMTNQ6UX39 209 aa8.2□□□□□ -1.1
SF3B6-201ENST00000233468 BAP18Q8IXM2 172 aa8.2□□□□□ -1.1
SF3B6-201ENST00000233468 EXOC3-AS1Q8N2X6 119 aa8.2□□□□□ -1.1
SF3B6-201ENST00000233468 STOML3Q8TAV4 291 aa8.2□□□□□ -1.1
SF3B6-201ENST00000233468 NEU1Q99519 415 aa8.2□□□□□ -1.1
SF3B6-201ENST00000233468 Q9H3A6 140 aa8.2□□□□□ -1.1
SF3B6-201ENST00000233468 OTORQ9NRC9 128 aa8.2□□□□□ -1.1
SF3B6-201ENST00000233468 A0A0J9YWU9 116 aa8.19□□□□□ -1.1
SF3B6-201ENST00000233468 TMEM189A5PLL7 270 aa8.19□□□□□ -1.1
SF3B6-201ENST00000233468 NPIPB6E9PJ23 425 aa8.19□□□□□ -1.1
SF3B6-201ENST00000233468 M0R3E3 92 aa8.19□□□□□ -1.1
SF3B6-201ENST00000233468 HBE1P02100 147 aa8.19□□□□□ -1.1
SF3B6-201ENST00000233468 SLC25A5P05141 298 aaKnown RBP8.19□□□□□ -1.1
SF3B6-201ENST00000233468 ARL14EPLP0DKL9 152 aa8.19□□□□□ -1.1
SF3B6-201ENST00000233468 SPINK13Q1W4C9 94 aa8.19□□□□□ -1.1
SF3B6-201ENST00000233468 DPPA3Q6W0C5 159 aa8.19□□□□□ -1.1
SF3B6-201ENST00000233468 ZNF705AQ6ZN79 300 aaPredicted RBP8.19□□□□□ -1.1
SF3B6-201ENST00000233468 IQCF2Q8IXL9 164 aa8.19□□□□□ -1.1
SF3B6-201ENST00000233468 TMEM256Q8N2U0 113 aa8.19□□□□□ -1.1
SF3B6-201ENST00000233468 ZNF503Q96F45 646 aa8.19□□□□□ -1.1
SF3B6-201ENST00000233468 PHYHIPLQ96FC7 376 aa8.19□□□□□ -1.1
SF3B6-201ENST00000233468 C20orf144Q9BQM9 153 aa8.19□□□□□ -1.1
SF3B6-201ENST00000233468 IGHV3OR16-12A0A075B7B8 117 aa8.18□□□□□ -1.1
SF3B6-201ENST00000233468 SERTM2A0A1B0GWG4 89 aa8.18□□□□□ -1.1
SF3B6-201ENST00000233468 RBAKDNA6NC62 111 aa8.18□□□□□ -1.1
SF3B6-201ENST00000233468 PGPA6NDG6 321 aa8.18□□□□□ -1.1
SF3B6-201ENST00000233468 PRAC2D3DTV9 90 aa8.18□□□□□ -1.1
SF3B6-201ENST00000233468 K7EQM0 130 aa8.18□□□□□ -1.1
SF3B6-201ENST00000233468 M0R2Z0 102 aa8.18□□□□□ -1.1
SF3B6-201ENST00000233468 HMGB3O15347 200 aaKnown RBP8.18□□□□□ -1.1
SF3B6-201ENST00000233468 GCHFRP30047 84 aa8.18□□□□□ -1.1
SF3B6-201ENST00000233468 ZFP69Q49AA0 526 aa8.18□□□□□ -1.1
SF3B6-201ENST00000233468 C9orf47Q6ZRZ4 202 aa8.18□□□□□ -1.1
SF3B6-201ENST00000233468 NKX6-2Q9C056 277 aaPredicted RBP8.18□□□□□ -1.1
SF3B6-201ENST00000233468 TRBV7-9A0A0J9YWB2 115 aa8.17□□□□□ -1.1
SF3B6-201ENST00000233468 TEX48A0A1B0GUV7 120 aa8.17□□□□□ -1.1
SF3B6-201ENST00000233468 NMBP08949 121 aa8.17□□□□□ -1.1
SF3B6-201ENST00000233468 RAB5CP51148 216 aa8.17□□□□□ -1.1
SF3B6-201ENST00000233468 RRN3P1Q2M238 152 aa8.17□□□□□ -1.1
SF3B6-201ENST00000233468 SLC51BQ86UW2 128 aa8.17□□□□□ -1.1
SF3B6-201ENST00000233468 SUN5Q8TC36 379 aa8.17□□□□□ -1.1
SF3B6-201ENST00000233468 LINC01587Q99440 93 aa8.17□□□□□ -1.1
SF3B6-201ENST00000233468 X6R8D5 127 aa8.17□□□□□ -1.1
SF3B6-201ENST00000233468 IGHV4-28A0A0C4DH34 117 aa8.16□□□□□ -1.1
SF3B6-201ENST00000233468 A0A1W2PRE2 83 aa8.16□□□□□ -1.1
SF3B6-201ENST00000233468 MAP1LC3B2A6NCE7 125 aa8.16□□□□□ -1.1
SF3B6-201ENST00000233468 DIRC3C9JPN6 131 aa8.16□□□□□ -1.1
SF3B6-201ENST00000233468 TEX46H3BTG2 121 aa8.16□□□□□ -1.1
SF3B6-201ENST00000233468 H7BYZ3 331 aa8.16□□□□□ -1.1
SF3B6-201ENST00000233468 CT45A10P0DMU9 189 aa8.16□□□□□ -1.1
SF3B6-201ENST00000233468 ZNF138P52744 262 aa8.16□□□□□ -1.1
SF3B6-201ENST00000233468 LGALSLQ3ZCW2 172 aaPredicted RBP8.16□□□□□ -1.1
SF3B6-201ENST00000233468 Q8NAQ8 132 aa8.16□□□□□ -1.1
SF3B6-201ENST00000233468 C5orf17Q8NAS9 161 aa8.16□□□□□ -1.1
SF3B6-201ENST00000233468 C11orf45Q8TAV5 145 aa8.16□□□□□ -1.1
SF3B6-201ENST00000233468 NIPSNAP3BQ9BS92 247 aa8.16□□□□□ -1.1
SF3B6-201ENST00000233468 MAP1LC3BQ9GZQ8 125 aa8.16□□□□□ -1.1
SF3B6-201ENST00000233468 AGPAT4-IT1Q9H0P7 198 aa8.16□□□□□ -1.1
SF3B6-201ENST00000233468 TRAV12-2A0A075B6T6 113 aa8.15□□□□□ -1.1
SF3B6-201ENST00000233468 CXorf65A6NEN9 183 aa8.15□□□□□ -1.1
SF3B6-201ENST00000233468 FBLL1A6NHQ2 334 aaKnown RBP8.15□□□□□ -1.1
SF3B6-201ENST00000233468 CRXO43186 299 aaPredicted RBP8.15□□□□□ -1.1
SF3B6-201ENST00000233468 EIF3GO75821 320 aaKnown RBP eCLIP8.15□□□□□ -1.1
SF3B6-201ENST00000233468 PPT1P50897 306 aa8.15□□□□□ -1.1
SF3B6-201ENST00000233468 TAS2R60P59551 318 aa8.15□□□□□ -1.1
SF3B6-201ENST00000233468 CCDC28AQ8IWP9 274 aa8.15□□□□□ -1.1
SF3B6-201ENST00000233468 C1orf158Q8N1D5 194 aa8.15□□□□□ -1.1
SF3B6-201ENST00000233468 TMED6Q8WW62 240 aa8.15□□□□□ -1.1
SF3B6-201ENST00000233468 ZNF492Q9P255 531 aa8.15□□□□□ -1.1
SF3B6-201ENST00000233468 LENEPQ9Y5L5 61 aa8.15□□□□□ -1.1
SF3B6-201ENST00000233468 IGKV2-40A0A087WW87 121 aaPredicted RBP8.14□□□□□ -1.11
SF3B6-201ENST00000233468 LOC102723971A0A1B0GUV8 181 aa8.14□□□□□ -1.11
SF3B6-201ENST00000233468 IGKV2D-40P01614 121 aaPredicted RBP8.14□□□□□ -1.11
SF3B6-201ENST00000233468 GPX1P07203 203 aa8.14□□□□□ -1.11
SF3B6-201ENST00000233468 CRISP2P16562 243 aa8.14□□□□□ -1.11
SF3B6-201ENST00000233468 ERCC8Q13216 396 aa8.14□□□□□ -1.11
SF3B6-201ENST00000233468 ZNF726P1Q15940 193 aa8.14□□□□□ -1.11
SF3B6-201ENST00000233468 FAM213BQ8TBF2 198 aa8.14□□□□□ -1.11
SF3B6-201ENST00000233468 SFT2D1Q8WV19 159 aa8.14□□□□□ -1.11
SF3B6-201ENST00000233468 TCEAL7Q9BRU2 100 aa8.14□□□□□ -1.11
SF3B6-201ENST00000233468 NDFIP1Q9BT67 221 aa8.14□□□□□ -1.11
SF3B6-201ENST00000233468 C7orf71A4D174 169 aa8.13□□□□□ -1.11
SF3B6-201ENST00000233468 NUPR2A6NF83 97 aa8.13□□□□□ -1.11
SF3B6-201ENST00000233468 F6UZH7 168 aa8.13□□□□□ -1.11
SF3B6-201ENST00000233468 DEFB4AO15263 64 aa8.13□□□□□ -1.11
SF3B6-201ENST00000233468 IFNA7P01567 189 aa8.13□□□□□ -1.11
SF3B6-201ENST00000233468 SPART-AS1P0CW21 52 aa8.13□□□□□ -1.11
SF3B6-201ENST00000233468 RBMY1A1P0DJD3 496 aaKnown RBP8.13□□□□□ -1.11
SF3B6-201ENST00000233468 RBMY1CP0DJD4 496 aa8.13□□□□□ -1.11
SF3B6-201ENST00000233468 SUMO1P63165 101 aaKnown RBP8.13□□□□□ -1.11
SF3B6-201ENST00000233468 RBMY1FQ15415 496 aaKnown RBP8.13□□□□□ -1.11
SF3B6-201ENST00000233468 GFI1BQ5VTD9 330 aa8.13□□□□□ -1.11
SF3B6-201ENST00000233468 ZNF493Q6ZR52 646 aa8.13□□□□□ -1.11
SF3B6-201ENST00000233468 GOLT1AQ6ZVE7 132 aa8.13□□□□□ -1.11
SF3B6-201ENST00000233468 MBD3L1Q8WWY6 194 aa8.13□□□□□ -1.11
SF3B6-201ENST00000233468 VGLL1Q99990 258 aa8.13□□□□□ -1.11
SF3B6-201ENST00000233468 PYGO2Q9BRQ0 406 aa8.13□□□□□ -1.11
SF3B6-201ENST00000233468 RPH3ALQ9UNE2 315 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms