RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 TMEM95Q3KNT9 176 aa11.18□□□□□ -0.62
PCDHB3-201ENST00000231130 ZNF502Q8TBZ5 544 aa11.18□□□□□ -0.62
PCDHB3-201ENST00000231130 CDIP1Q9H305 208 aa11.18□□□□□ -0.62
PCDHB3-201ENST00000231130 NDUFB3O43676 98 aa11.18□□□□□ -0.62
PCDHB3-201ENST00000231130 IGLV2-23P01705 113 aa11.18□□□□□ -0.62
PCDHB3-201ENST00000231130 IL4P05112 153 aa11.18□□□□□ -0.62
PCDHB3-201ENST00000231130 LEPP41159 167 aa11.18□□□□□ -0.62
PCDHB3-201ENST00000231130 C3orf56Q8N813 242 aa11.18□□□□□ -0.62
PCDHB3-201ENST00000231130 TRAV17A0A0B4J275 112 aa11.17□□□□□ -0.62
PCDHB3-201ENST00000231130 TM4SF5O14894 197 aa11.17□□□□□ -0.62
PCDHB3-201ENST00000231130 PRTN3P24158 256 aa11.17□□□□□ -0.62
PCDHB3-201ENST00000231130 TTC32Q5I0X7 151 aa11.17□□□□□ -0.62
PCDHB3-201ENST00000231130 TRAV40A0A0B4J280 105 aa11.17□□□□□ -0.62
PCDHB3-201ENST00000231130 C16orf97H3BN30 126 aa11.17□□□□□ -0.62
PCDHB3-201ENST00000231130 IGKCP01834 107 aa11.17□□□□□ -0.62
PCDHB3-201ENST00000231130 ZNF492Q9P255 531 aa11.17□□□□□ -0.62
PCDHB3-201ENST00000231130 FCN3O75636 299 aa11.17□□□□□ -0.62
PCDHB3-201ENST00000231130 NDUFA3O95167 84 aa11.17□□□□□ -0.62
PCDHB3-201ENST00000231130 EVI2AP22794 236 aa11.17□□□□□ -0.62
PCDHB3-201ENST00000231130 KLRD1Q13241 179 aa11.17□□□□□ -0.62
PCDHB3-201ENST00000231130 TWIST1Q15672 202 aa11.17□□□□□ -0.62
PCDHB3-201ENST00000231130 RRN3P1Q2M238 152 aa11.17□□□□□ -0.62
PCDHB3-201ENST00000231130 CT83Q5H943 113 aa11.17□□□□□ -0.62
PCDHB3-201ENST00000231130 IGHV3-23P01764 117 aa11.16□□□□□ -0.62
PCDHB3-201ENST00000231130 SCGB1C2P0DMR2 95 aa11.16□□□□□ -0.62
PCDHB3-201ENST00000231130 OTORQ9NRC9 128 aa11.16□□□□□ -0.62
PCDHB3-201ENST00000231130 Q8TAT8 98 aa11.16□□□□□ -0.62
PCDHB3-201ENST00000231130 PHLDA1Q8WV24 401 aaPredicted RBP11.16□□□□□ -0.62
PCDHB3-201ENST00000231130 KIR2DL4Q99706 377 aa11.16□□□□□ -0.62
PCDHB3-201ENST00000231130 GFRA4Q9GZZ7 299 aa11.16□□□□□ -0.62
PCDHB3-201ENST00000231130 ASH1LQ9NR48 2969 aaKnown RBP11.16□□□□□ -0.62
PCDHB3-201ENST00000231130 TMEM8BA6NDV4 472 aa11.16□□□□□ -0.62
PCDHB3-201ENST00000231130 IGLV2-11P01706 119 aa11.16□□□□□ -0.62
PCDHB3-201ENST00000231130 CRIP1P50238 77 aa11.16□□□□□ -0.62
PCDHB3-201ENST00000231130 TRGV9Q99603 122 aa11.16□□□□□ -0.62
PCDHB3-201ENST00000231130 HIF1ANQ9NWT6 349 aa11.16□□□□□ -0.62
PCDHB3-201ENST00000231130 RELNP78509 3460 aa11.16□□□□□ -0.62
PCDHB3-201ENST00000231130 ANKRD11Q6UB99 2663 aaPredicted RBP11.15□□□□□ -0.62
PCDHB3-201ENST00000231130 ZNF785A8K8V0 405 aa11.15□□□□□ -0.62
PCDHB3-201ENST00000231130 LYNX1G3V0Z9 82 aa11.15□□□□□ -0.62
PCDHB3-201ENST00000231130 HOXA3O43365 443 aaPredicted RBP11.15□□□□□ -0.62
PCDHB3-201ENST00000231130 NPYP01303 97 aa11.15□□□□□ -0.62
PCDHB3-201ENST00000231130 LYNX1P0DP58 116 aa11.15□□□□□ -0.62
PCDHB3-201ENST00000231130 CD40P25942 277 aa11.15□□□□□ -0.62
PCDHB3-201ENST00000231130 NFE4Q86UQ8 179 aa11.15□□□□□ -0.62
PCDHB3-201ENST00000231130 TMEM75Q8N9X5 138 aa11.15□□□□□ -0.62
PCDHB3-201ENST00000231130 RPEQ96AT9 228 aa11.15□□□□□ -0.62
PCDHB3-201ENST00000231130 SPTAN1Q13813 2472 aaKnown RBP11.15□□□□□ -0.62
PCDHB3-201ENST00000231130 IGLV3-9A0A075B6K5 115 aa11.14□□□□□ -0.63
PCDHB3-201ENST00000231130 IGKV2-40A0A087WW87 121 aaPredicted RBP11.14□□□□□ -0.63
PCDHB3-201ENST00000231130 CDX4O14627 284 aaPredicted RBP11.14□□□□□ -0.63
PCDHB3-201ENST00000231130 IGKV2D-40P01614 121 aaPredicted RBP11.14□□□□□ -0.63
PCDHB3-201ENST00000231130 RPL32P62910 135 aaKnown RBP11.14□□□□□ -0.63
PCDHB3-201ENST00000231130 SRSF9Q13242 221 aaKnown RBP eCLIP11.14□□□□□ -0.63
PCDHB3-201ENST00000231130 CITED1Q99966 193 aa11.14□□□□□ -0.63
PCDHB3-201ENST00000231130 GAGE2BQ13066 116 aa11.14□□□□□ -0.63
PCDHB3-201ENST00000231130 GAGE2EQ4V326 116 aa11.14□□□□□ -0.63
PCDHB3-201ENST00000231130 ZNF562Q6V9R5 426 aa11.14□□□□□ -0.63
PCDHB3-201ENST00000231130 MAPKAPK5-AS1Q8N8E1 139 aa11.14□□□□□ -0.63
PCDHB3-201ENST00000231130 TM2D2Q9BX73 214 aa11.14□□□□□ -0.63
PCDHB3-201ENST00000231130 NGBQ9NPG2 151 aa11.14□□□□□ -0.63
PCDHB3-201ENST00000231130 GAGE2DQ9UEU5 116 aa11.14□□□□□ -0.63
PCDHB3-201ENST00000231130 MSRB1Q9NZV6 116 aa11.14□□□□□ -0.63
PCDHB3-201ENST00000231130 MRPL51Q4U2R6 128 aaKnown RBP11.13□□□□□ -0.63
PCDHB3-201ENST00000231130 DLX4Q92988 240 aaPredicted RBP11.13□□□□□ -0.63
PCDHB3-201ENST00000231130 GAGE12JA6NER3 117 aa11.13□□□□□ -0.63
PCDHB3-201ENST00000231130 LINC01549A6NIU2 74 aa11.13□□□□□ -0.63
PCDHB3-201ENST00000231130 GAGE7O76087 117 aa11.13□□□□□ -0.63
PCDHB3-201ENST00000231130 DPM2O94777 84 aa11.13□□□□□ -0.63
PCDHB3-201ENST00000231130 GAGE12FP0CL80 117 aa11.13□□□□□ -0.63
PCDHB3-201ENST00000231130 GAGE12GP0CL81 117 aa11.13□□□□□ -0.63
PCDHB3-201ENST00000231130 GAGE12IP0CL82 117 aa11.13□□□□□ -0.63
PCDHB3-201ENST00000231130 GATA4P43694 442 aa11.13□□□□□ -0.63
PCDHB3-201ENST00000231130 GAGE4Q13068 117 aa11.13□□□□□ -0.63
PCDHB3-201ENST00000231130 SCGB1D4Q6XE38 83 aa11.13□□□□□ -0.63
PCDHB3-201ENST00000231130 C1orf122Q6ZSJ8 110 aa11.13□□□□□ -0.63
PCDHB3-201ENST00000231130 ZFHX2Q9C0A1 2572 aaPredicted RBP11.13□□□□□ -0.63
PCDHB3-201ENST00000231130 CCDC179H3BU77 68 aa11.13□□□□□ -0.63
PCDHB3-201ENST00000231130 GAS8-AS1O95177 125 aa11.13□□□□□ -0.63
PCDHB3-201ENST00000231130 ORM1P02763 201 aa11.13□□□□□ -0.63
PCDHB3-201ENST00000231130 FHL3Q13643 280 aa11.13□□□□□ -0.63
PCDHB3-201ENST00000231130 PPP1R27Q86WC6 154 aa11.13□□□□□ -0.63
PCDHB3-201ENST00000231130 PRSS33Q8NF86 280 aa11.13□□□□□ -0.63
PCDHB3-201ENST00000231130 CTSZQ9UBR2 303 aa11.13□□□□□ -0.63
PCDHB3-201ENST00000231130 TRAV8-2A0A0B4J237 113 aa11.12□□□□□ -0.63
PCDHB3-201ENST00000231130 LINC01548A6NM66 108 aa11.12□□□□□ -0.63
PCDHB3-201ENST00000231130 NCBP2LA6PVI3 153 aaKnown RBP11.12□□□□□ -0.63
PCDHB3-201ENST00000231130 ZFP2Q6ZN57 461 aa11.12□□□□□ -0.63
PCDHB3-201ENST00000231130 SCNM1Q9BWG6 230 aa11.12□□□□□ -0.63
PCDHB3-201ENST00000231130 KLK15Q9H2R5 256 aa11.12□□□□□ -0.63
PCDHB3-201ENST00000231130 DYNLRB1Q9NP97 96 aa11.12□□□□□ -0.63
PCDHB3-201ENST00000231130 SNCGO76070 127 aa11.12□□□□□ -0.63
PCDHB3-201ENST00000231130 FAM104BQ5XKR9 115 aa11.12□□□□□ -0.63
PCDHB3-201ENST00000231130 Q6AWC8 147 aa11.12□□□□□ -0.63
PCDHB3-201ENST00000231130 SIGLEC9Q9Y336 463 aa11.12□□□□□ -0.63
PCDHB3-201ENST00000231130 C3orf36Q3SXR2 165 aa11.11□□□□□ -0.63
PCDHB3-201ENST00000231130 HIGD1BQ9P298 99 aa11.11□□□□□ -0.63
PCDHB3-201ENST00000231130 TRBV19A0A075B6N1 114 aa11.11□□□□□ -0.63
PCDHB3-201ENST00000231130 C17orf100A8MU93 164 aa11.11□□□□□ -0.63
PCDHB3-201ENST00000231130 GATA1P15976 413 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms