RNA–Protein interactions for RNA: ENST00000229214.8

KRR1-201, Transcript of KRR1, small subunit processome component homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRR1, Length 10,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRR1-201ENST00000229214 TCF15Q12870 199 aa4.31□□□□□ -1.72
KRR1-201ENST00000229214 TEN1Q86WV5 123 aa4.31□□□□□ -1.72
KRR1-201ENST00000229214 TRBV6-1A0A0K0K1D8 114 aa4.31□□□□□ -1.72
KRR1-201ENST00000229214 K7EM74 188 aa4.31□□□□□ -1.72
KRR1-201ENST00000229214 HIST3H2BBQ8N257 126 aa4.31□□□□□ -1.72
KRR1-201ENST00000229214 ITLN1Q8WWA0 313 aa4.31□□□□□ -1.72
KRR1-201ENST00000229214 KLK5Q9Y337 293 aaPredicted RBP4.31□□□□□ -1.72
KRR1-201ENST00000229214 NBEAL1Q6ZS30 2694 aa4.31□□□□□ -1.72
KRR1-201ENST00000229214 TRAV12-1A0A0B4J245 112 aa4.31□□□□□ -1.72
KRR1-201ENST00000229214 ZNF137PP52743 207 aa4.31□□□□□ -1.72
KRR1-201ENST00000229214 LINC00158P58513 81 aa4.31□□□□□ -1.72
KRR1-201ENST00000229214 RFLNBQ8N5W9 214 aa4.31□□□□□ -1.72
KRR1-201ENST00000229214 ZNF525Q8N782 197 aa4.31□□□□□ -1.72
KRR1-201ENST00000229214 SLC25A29Q8N8R3 303 aa4.31□□□□□ -1.72
KRR1-201ENST00000229214 P0C879 139 aa4.31□□□□□ -1.72
KRR1-201ENST00000229214 RCHY1Q96PM5 261 aa4.31□□□□□ -1.72
KRR1-201ENST00000229214 C12orf77C9JDV5 145 aa4.31□□□□□ -1.72
KRR1-201ENST00000229214 IGKV1D-33P01593 117 aa4.31□□□□□ -1.72
KRR1-201ENST00000229214 IGKV1-33P01594 117 aa4.31□□□□□ -1.72
KRR1-201ENST00000229214 FOXC1Q12948 553 aa4.31□□□□□ -1.72
KRR1-201ENST00000229214 GAGE5Q13069 117 aa4.31□□□□□ -1.72
KRR1-201ENST00000229214 GAGE6Q13070 117 aa4.31□□□□□ -1.72
KRR1-201ENST00000229214 NANOS3P60323 173 aaKnown RBP4.31□□□□□ -1.72
KRR1-201ENST00000229214 COX17Q14061 63 aa4.31□□□□□ -1.72
KRR1-201ENST00000229214 VMO1Q7Z5L0 202 aa4.31□□□□□ -1.72
KRR1-201ENST00000229214 THAP8Q8NA92 274 aa4.31□□□□□ -1.72
KRR1-201ENST00000229214 GLI4P10075 376 aa4.31□□□□□ -1.72
KRR1-201ENST00000229214 LTBRP36941 435 aa4.31□□□□□ -1.72
KRR1-201ENST00000229214 KLHDC3Q9BQ90 382 aa4.31□□□□□ -1.72
KRR1-201ENST00000229214 SUMO4Q6EEV6 95 aa4.3□□□□□ -1.72
KRR1-201ENST00000229214 Q8N8P6 123 aa4.3□□□□□ -1.72
KRR1-201ENST00000229214 NUP35Q8NFH5 326 aa4.3□□□□□ -1.72
KRR1-201ENST00000229214 TIMM17AQ99595 171 aa4.3□□□□□ -1.72
KRR1-201ENST00000229214 MUC21A0A0G2JKD1 596 aa4.3□□□□□ -1.72
KRR1-201ENST00000229214 MUC21A0A140T8X8 626 aa4.3□□□□□ -1.72
KRR1-201ENST00000229214 SMAD7O15105 426 aaKnown RBP4.3□□□□□ -1.72
KRR1-201ENST00000229214 THBDP07204 575 aa4.3□□□□□ -1.72
KRR1-201ENST00000229214 ZNF124Q15973 351 aa4.3□□□□□ -1.72
KRR1-201ENST00000229214 MUC21Q5SSG8 566 aa4.3□□□□□ -1.72
KRR1-201ENST00000229214 TMEM179BQ7Z7N9 219 aa4.3□□□□□ -1.72
KRR1-201ENST00000229214 SDHAF1A6NFY7 115 aa4.3□□□□□ -1.72
KRR1-201ENST00000229214 NPYP01303 97 aa4.3□□□□□ -1.72
KRR1-201ENST00000229214 Q8NFD4 153 aa4.3□□□□□ -1.72
KRR1-201ENST00000229214 MRPS18BQ9Y676 258 aaKnown RBP4.3□□□□□ -1.72
KRR1-201ENST00000229214 GZMMP51124 257 aa4.3□□□□□ -1.72
KRR1-201ENST00000229214 H2BFSP57053 126 aa4.3□□□□□ -1.72
KRR1-201ENST00000229214 TEX36Q5VZQ5 186 aa4.3□□□□□ -1.72
KRR1-201ENST00000229214 CCL13Q99616 98 aa4.3□□□□□ -1.72
KRR1-201ENST00000229214 CRYGSP22914 178 aa4.3□□□□□ -1.72
KRR1-201ENST00000229214 C16orf47Q6ZP98 133 aaPredicted RBP4.3□□□□□ -1.72
KRR1-201ENST00000229214 SPATA12Q7Z6I5 190 aa4.3□□□□□ -1.72
KRR1-201ENST00000229214 PIFOQ8TCI5 191 aa4.3□□□□□ -1.72
KRR1-201ENST00000229214 ITLN2Q8WWU7 325 aaPredicted RBP4.3□□□□□ -1.72
KRR1-201ENST00000229214 TRAV8-3A0A0A6YYJ7 113 aa4.3□□□□□ -1.72
KRR1-201ENST00000229214 H7C2G1 150 aa4.3□□□□□ -1.72
KRR1-201ENST00000229214 IGHV1-8P0DP01 117 aa4.3□□□□□ -1.72
KRR1-201ENST00000229214 COX8AP10176 69 aa4.3□□□□□ -1.72
KRR1-201ENST00000229214 DEFB119Q8N690 84 aa4.3□□□□□ -1.72
KRR1-201ENST00000229214 FAM110DQ8TAY7 271 aaPredicted RBP4.3□□□□□ -1.72
KRR1-201ENST00000229214 CHCHD7Q9BUK0 85 aa4.3□□□□□ -1.72
KRR1-201ENST00000229214 BSPH1Q075Z2 132 aa4.3□□□□□ -1.72
KRR1-201ENST00000229214 DEFB108AA8MXU0 73 aa4.3□□□□□ -1.72
KRR1-201ENST00000229214 CTAG1AP78358 180 aa4.3□□□□□ -1.72
KRR1-201ENST00000229214 C18orf12Q96KH6 178 aa4.3□□□□□ -1.72
KRR1-201ENST00000229214 SHANK2-AS3Q9BTD1 123 aa4.3□□□□□ -1.72
KRR1-201ENST00000229214 SAA1P0DJI8 122 aaPredicted RBP4.29□□□□□ -1.72
KRR1-201ENST00000229214 CCL18P55774 89 aa4.29□□□□□ -1.72
KRR1-201ENST00000229214 COL6A5A8TX70 2615 aa4.29□□□□□ -1.72
KRR1-201ENST00000229214 SAA2-SAA4A0A096LPE2 208 aa4.29□□□□□ -1.72
KRR1-201ENST00000229214 IGHV1-3A0A0C4DH29 117 aa4.29□□□□□ -1.72
KRR1-201ENST00000229214 ZC2HC1BQ5TFG8 222 aa4.29□□□□□ -1.72
KRR1-201ENST00000229214 COLCA1Q6ZS62 124 aa4.29□□□□□ -1.72
KRR1-201ENST00000229214 TOMM7Q9P0U1 55 aa4.29□□□□□ -1.72
KRR1-201ENST00000229214 FZR1Q9UM11 496 aa4.29□□□□□ -1.72
KRR1-201ENST00000229214 COL11A2P13942 1736 aaPredicted RBP4.29□□□□□ -1.72
KRR1-201ENST00000229214 A0A1W2PQF6 199 aa4.29□□□□□ -1.72
KRR1-201ENST00000229214 PROB1E7EW31 1015 aa4.29□□□□□ -1.72
KRR1-201ENST00000229214 K7EMT4 169 aa4.29□□□□□ -1.72
KRR1-201ENST00000229214 CXorf67Q86X51 503 aaPredicted RBP4.29□□□□□ -1.72
KRR1-201ENST00000229214 CGB1A6NKQ9 187 aa4.29□□□□□ -1.72
KRR1-201ENST00000229214 SRRM4A7MD48 611 aaKnown RBP4.29□□□□□ -1.72
KRR1-201ENST00000229214 SAP30O75446 220 aa4.29□□□□□ -1.72
KRR1-201ENST00000229214 TGFAP01135 160 aa4.29□□□□□ -1.72
KRR1-201ENST00000229214 GVQW1Q8N7I0 195 aa4.29□□□□□ -1.72
KRR1-201ENST00000229214 GCN1Q92616 2671 aaKnown RBP4.29□□□□□ -1.72
KRR1-201ENST00000229214 FAM240AA0A1B0GVK7 77 aa4.29□□□□□ -1.72
KRR1-201ENST00000229214 CECR9P0C854 216 aa4.29□□□□□ -1.72
KRR1-201ENST00000229214 FAM104BQ5XKR9 115 aa4.29□□□□□ -1.72
KRR1-201ENST00000229214 C9orf118A6NHY6 69 aa4.29□□□□□ -1.72
KRR1-201ENST00000229214 K7ENP7 123 aa4.29□□□□□ -1.72
KRR1-201ENST00000229214 CDKN1AP38936 164 aa4.29□□□□□ -1.72
KRR1-201ENST00000229214 ZNF134P52741 427 aa4.29□□□□□ -1.72
KRR1-201ENST00000229214 SP5Q6BEB4 398 aaPredicted RBP4.29□□□□□ -1.72
KRR1-201ENST00000229214 TREML4Q6UXN2 200 aa4.29□□□□□ -1.72
KRR1-201ENST00000229214 C20orf173Q96LM9 149 aa4.29□□□□□ -1.72
KRR1-201ENST00000229214 A0A1W2PRX2 142 aa4.29□□□□□ -1.72
KRR1-201ENST00000229214 CHKB-CPT1BH3BT56 60 aa4.29□□□□□ -1.72
KRR1-201ENST00000229214 K7EN84 100 aa4.29□□□□□ -1.72
KRR1-201ENST00000229214 RNF144BQ7Z419 303 aa4.29□□□□□ -1.72
KRR1-201ENST00000229214 HILPDAQ9Y5L2 63 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms