RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 CNTFRP26992 372 aa13.86□□□□□ -0.19
CDKN1B-201ENST00000228872 FCER1GP30273 86 aa13.86□□□□□ -0.19
CDKN1B-201ENST00000228872 TWIST1Q15672 202 aa13.86□□□□□ -0.19
CDKN1B-201ENST00000228872 NPIPB5A8MRT5 1133 aa13.86□□□□□ -0.19
CDKN1B-201ENST00000228872 KALRNO60229 2985 aa13.86□□□□□ -0.19
CDKN1B-201ENST00000228872 C12orf74Q32Q52 190 aa13.86□□□□□ -0.19
CDKN1B-201ENST00000228872 AMTNQ6UX39 209 aa13.86□□□□□ -0.19
CDKN1B-201ENST00000228872 C22orf34Q6ZV56 151 aa13.86□□□□□ -0.19
CDKN1B-201ENST00000228872 ZNF502Q8TBZ5 544 aa13.86□□□□□ -0.19
CDKN1B-201ENST00000228872 VKORC1Q9BQB6 163 aa13.86□□□□□ -0.19
CDKN1B-201ENST00000228872 PRO0461Q9UI25 63 aa13.86□□□□□ -0.19
CDKN1B-201ENST00000228872 HLA-DRB4P13762 266 aa13.85□□□□□ -0.19
CDKN1B-201ENST00000228872 ZC2HC1BQ5TFG8 222 aa13.85□□□□□ -0.19
CDKN1B-201ENST00000228872 C8orf31Q8N9H6 132 aa13.85□□□□□ -0.19
CDKN1B-201ENST00000228872 HLA-DRB4X5D2U9 266 aa13.85□□□□□ -0.19
CDKN1B-201ENST00000228872 TMEM8BA6NDV4 472 aa13.85□□□□□ -0.19
CDKN1B-201ENST00000228872 TEX22C9J3V5 150 aa13.85□□□□□ -0.19
CDKN1B-201ENST00000228872 I3L2K1 104 aa13.85□□□□□ -0.19
CDKN1B-201ENST00000228872 MRPS12O15235 138 aaKnown RBP13.85□□□□□ -0.19
CDKN1B-201ENST00000228872 CRYGBP07316 175 aa13.85□□□□□ -0.19
CDKN1B-201ENST00000228872 INSL3P51460 131 aa13.85□□□□□ -0.19
CDKN1B-201ENST00000228872 GAGE13Q4V321 117 aa13.85□□□□□ -0.19
CDKN1B-201ENST00000228872 KLF17Q5JT82 389 aaPredicted RBP13.85□□□□□ -0.19
CDKN1B-201ENST00000228872 FOXC2Q99958 501 aa13.85□□□□□ -0.19
CDKN1B-201ENST00000228872 SH3BGRL2Q9UJC5 107 aa13.85□□□□□ -0.19
CDKN1B-201ENST00000228872 PIEZO1Q92508 2521 aa13.85□□□□□ -0.19
CDKN1B-201ENST00000228872 TRAV26-1A0A087WT03 109 aa13.84□□□□□ -0.19
CDKN1B-201ENST00000228872 DPM2O94777 84 aa13.84□□□□□ -0.19
CDKN1B-201ENST00000228872 ATP5G2Q06055 141 aa13.84□□□□□ -0.19
CDKN1B-201ENST00000228872 MTURNQ8N3F0 131 aa13.84□□□□□ -0.19
CDKN1B-201ENST00000228872 RNF185Q96GF1 192 aa13.84□□□□□ -0.19
CDKN1B-201ENST00000228872 MRAP2Q96G30 205 aa13.84□□□□□ -0.19
CDKN1B-201ENST00000228872 GAS8-AS1O95177 125 aa13.83□□□□□ -0.2
CDKN1B-201ENST00000228872 MAPKAPK5-AS1Q8N8E1 139 aa13.83□□□□□ -0.2
CDKN1B-201ENST00000228872 TAL2Q16559 108 aa13.83□□□□□ -0.2
CDKN1B-201ENST00000228872 SIGLEC9Q9Y336 463 aa13.83□□□□□ -0.2
CDKN1B-201ENST00000228872 EGR2P11161 476 aaPredicted RBP13.82□□□□□ -0.2
CDKN1B-201ENST00000228872 ATP5LO75964 103 aa13.82□□□□□ -0.2
CDKN1B-201ENST00000228872 RRN3P1Q2M238 152 aa13.82□□□□□ -0.2
CDKN1B-201ENST00000228872 TLN1Q9Y490 2541 aaKnown RBP13.81□□□□□ -0.2
CDKN1B-201ENST00000228872 IGLC6P0CF74 106 aa13.81□□□□□ -0.2
CDKN1B-201ENST00000228872 CCL8P80075 99 aa13.81□□□□□ -0.2
CDKN1B-201ENST00000228872 NXT2Q9NPJ8 142 aaKnown RBP13.81□□□□□ -0.2
CDKN1B-201ENST00000228872 CD40P25942 277 aa13.81□□□□□ -0.2
CDKN1B-201ENST00000228872 CRYBA4P53673 196 aa13.81□□□□□ -0.2
CDKN1B-201ENST00000228872 LINC01559Q495D7 138 aa13.81□□□□□ -0.2
CDKN1B-201ENST00000228872 MSRB1Q9NZV6 116 aa13.81□□□□□ -0.2
CDKN1B-201ENST00000228872 CACNA1AO00555 2505 aa13.81□□□□□ -0.2
CDKN1B-201ENST00000228872 ROS1P08922 2347 aa13.8□□□□□ -0.2
CDKN1B-201ENST00000228872 TMEM158Q8WZ71 300 aa13.8□□□□□ -0.2
CDKN1B-201ENST00000228872 AAMDCQ9H7C9 122 aa13.8□□□□□ -0.2
CDKN1B-201ENST00000228872 TMEM160Q9NX00 188 aa13.8□□□□□ -0.2
CDKN1B-201ENST00000228872 ABCA1O95477 2261 aa13.8□□□□□ -0.2
CDKN1B-201ENST00000228872 TNFRSF6BO95407 300 aa13.8□□□□□ -0.2
CDKN1B-201ENST00000228872 COX8CQ7Z4L0 72 aa13.8□□□□□ -0.2
CDKN1B-201ENST00000228872 TTC9CQ8N5M4 171 aa13.8□□□□□ -0.2
CDKN1B-201ENST00000228872 ZNF491Q8N8L2 437 aa13.8□□□□□ -0.2
CDKN1B-201ENST00000228872 TRAV40A0A0B4J280 105 aa13.79□□□□□ -0.2
CDKN1B-201ENST00000228872 PLGLAQ15195 96 aa13.79□□□□□ -0.2
CDKN1B-201ENST00000228872 RNF125Q96EQ8 232 aa13.79□□□□□ -0.2
CDKN1B-201ENST00000228872 C20orf78Q9BR46 151 aa13.79□□□□□ -0.2
CDKN1B-201ENST00000228872 GEMIN7Q9H840 131 aaKnown RBP13.79□□□□□ -0.2
CDKN1B-201ENST00000228872 IGKV2-40A0A087WW87 121 aaPredicted RBP13.79□□□□□ -0.2
CDKN1B-201ENST00000228872 IGKV2D-40P01614 121 aaPredicted RBP13.79□□□□□ -0.2
CDKN1B-201ENST00000228872 A0A1B0GWB2 263 aa13.78□□□□□ -0.2
CDKN1B-201ENST00000228872 IL4P05112 153 aa13.78□□□□□ -0.2
CDKN1B-201ENST00000228872 DLX6P56179 175 aa13.78□□□□□ -0.2
CDKN1B-201ENST00000228872 PPP1R27Q86WC6 154 aa13.78□□□□□ -0.2
CDKN1B-201ENST00000228872 ZNF80P51504 273 aaPredicted RBP13.78□□□□□ -0.2
CDKN1B-201ENST00000228872 PDE6HQ13956 83 aa13.78□□□□□ -0.2
CDKN1B-201ENST00000228872 ZNF575Q86XF7 245 aa13.78□□□□□ -0.2
CDKN1B-201ENST00000228872 PRR25Q96S07 402 aa13.78□□□□□ -0.2
CDKN1B-201ENST00000228872 HIST1H4GQ99525 98 aa13.78□□□□□ -0.2
CDKN1B-201ENST00000228872 MRPL16Q9NX20 251 aaKnown RBP13.78□□□□□ -0.2
CDKN1B-201ENST00000228872 MRPL35Q9NZE8 188 aaKnown RBP13.78□□□□□ -0.2
CDKN1B-201ENST00000228872 K7EIM0 57 aa13.77□□□□□ -0.2
CDKN1B-201ENST00000228872 LYPD2Q6UXB3 125 aa13.77□□□□□ -0.2
CDKN1B-201ENST00000228872 TRBV7-3A0A075B6L6 115 aa13.77□□□□□ -0.21
CDKN1B-201ENST00000228872 NDUFB3O43676 98 aa13.77□□□□□ -0.21
CDKN1B-201ENST00000228872 APOMO95445 188 aa13.77□□□□□ -0.21
CDKN1B-201ENST00000228872 GATA1P15976 413 aaPredicted RBP13.77□□□□□ -0.21
CDKN1B-201ENST00000228872 FBXL15Q9H469 300 aa13.77□□□□□ -0.21
CDKN1B-201ENST00000228872 NCOR2Q9Y618 2525 aa13.76□□□□□ -0.21
CDKN1B-201ENST00000228872 C8orf86Q6ZUL3 223 aa13.76□□□□□ -0.21
CDKN1B-201ENST00000228872 IGHV1-8P0DP01 117 aa13.76□□□□□ -0.21
CDKN1B-201ENST00000228872 LY6DQ14210 128 aa13.76□□□□□ -0.21
CDKN1B-201ENST00000228872 Q8TAT8 98 aa13.76□□□□□ -0.21
CDKN1B-201ENST00000228872 CDIP1Q9H305 208 aa13.76□□□□□ -0.21
CDKN1B-201ENST00000228872 LOXP28300 417 aaPredicted RBP13.75□□□□□ -0.21
CDKN1B-201ENST00000228872 PPIFP30405 207 aaKnown RBP13.75□□□□□ -0.21
CDKN1B-201ENST00000228872 FOXI1Q12951 378 aa13.75□□□□□ -0.21
CDKN1B-201ENST00000228872 Q8N8P6 123 aa13.75□□□□□ -0.21
CDKN1B-201ENST00000228872 NUP37Q8NFH4 326 aa13.75□□□□□ -0.21
CDKN1B-201ENST00000228872 PSMG3-AS1Q96PY0 264 aa13.75□□□□□ -0.21
CDKN1B-201ENST00000228872 CNFNQ9BYD5 112 aa13.75□□□□□ -0.21
CDKN1B-201ENST00000228872 TMEM155Q4W5P6 130 aa13.75□□□□□ -0.21
CDKN1B-201ENST00000228872 C1QTNF4Q9BXJ3 329 aa13.75□□□□□ -0.21
CDKN1B-201ENST00000228872 IGLV2-18A0A075B6J9 118 aa13.74□□□□□ -0.21
CDKN1B-201ENST00000228872 ZZEF1O43149 2961 aa13.74□□□□□ -0.21
CDKN1B-201ENST00000228872 SYT8Q8NBV8 401 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms