RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 C15orf53Q8NAA6 179 aa10.01□□□□□ -0.81
GPN3-201ENST00000228827 SCGB1C1Q8TD33 95 aa10.01□□□□□ -0.81
GPN3-201ENST00000228827 RNF141Q8WVD5 230 aa10.01□□□□□ -0.81
GPN3-201ENST00000228827 WFDC1Q9HC57 220 aa10.01□□□□□ -0.81
GPN3-201ENST00000228827 C7orf71A4D174 169 aa10□□□□□ -0.81
GPN3-201ENST00000228827 EIF3GO75821 320 aaKnown RBP eCLIP10□□□□□ -0.81
GPN3-201ENST00000228827 NUDT3O95989 172 aa10□□□□□ -0.81
GPN3-201ENST00000228827 SLC25A5P05141 298 aaKnown RBP10□□□□□ -0.81
GPN3-201ENST00000228827 CD300CQ08708 224 aa10□□□□□ -0.81
GPN3-201ENST00000228827 BTN1A1Q13410 526 aa10□□□□□ -0.81
GPN3-201ENST00000228827 FXYD5Q96DB9 178 aa10□□□□□ -0.81
GPN3-201ENST00000228827 PHYHIPLQ96FC7 376 aa10□□□□□ -0.81
GPN3-201ENST00000228827 VGLL1Q99990 258 aa10□□□□□ -0.81
GPN3-201ENST00000228827 GAGE12BA1L429 117 aa9.99□□□□□ -0.81
GPN3-201ENST00000228827 SNURFLB1AK76 121 aa9.99□□□□□ -0.81
GPN3-201ENST00000228827 GAGE7O76087 117 aa9.99□□□□□ -0.81
GPN3-201ENST00000228827 GAGE12FP0CL80 117 aa9.99□□□□□ -0.81
GPN3-201ENST00000228827 GAGE12GP0CL81 117 aa9.99□□□□□ -0.81
GPN3-201ENST00000228827 GAGE12IP0CL82 117 aa9.99□□□□□ -0.81
GPN3-201ENST00000228827 RNASE4P34096 147 aaKnown RBP9.99□□□□□ -0.81
GPN3-201ENST00000228827 TMEM78Q5T7P6 136 aa9.99□□□□□ -0.81
GPN3-201ENST00000228827 LINC00477Q96M19 166 aa9.99□□□□□ -0.81
GPN3-201ENST00000228827 RANP62826 216 aaKnown RBP9.98□□□□□ -0.81
GPN3-201ENST00000228827 UBE2L3P68036 154 aaKnown RBP9.98□□□□□ -0.81
GPN3-201ENST00000228827 OR5I1Q13606 314 aa9.98□□□□□ -0.81
GPN3-201ENST00000228827 RNF212Q495C1 297 aa9.98□□□□□ -0.81
GPN3-201ENST00000228827 ZNF503Q96F45 646 aa9.98□□□□□ -0.81
GPN3-201ENST00000228827 FAM19A4Q96LR4 140 aa9.98□□□□□ -0.81
GPN3-201ENST00000228827 PYGO2Q9BRQ0 406 aa9.98□□□□□ -0.81
GPN3-201ENST00000228827 ATG101Q9BSB4 218 aa9.98□□□□□ -0.81
GPN3-201ENST00000228827 KLLNB2CW77 178 aa9.98□□□□□ -0.81
GPN3-201ENST00000228827 GPX1P07203 203 aa9.98□□□□□ -0.81
GPN3-201ENST00000228827 PRR9Q5T870 116 aa9.98□□□□□ -0.81
GPN3-201ENST00000228827 C9orf47Q6ZRZ4 202 aa9.98□□□□□ -0.81
GPN3-201ENST00000228827 Q8TAT8 98 aa9.98□□□□□ -0.81
GPN3-201ENST00000228827 HECTD4Q9Y4D8 3996 aa9.97□□□□□ -0.81
GPN3-201ENST00000228827 ZNF324O75467 553 aaPredicted RBP9.97□□□□□ -0.81
GPN3-201ENST00000228827 LGALS9BQ3B8N2 356 aa9.97□□□□□ -0.81
GPN3-201ENST00000228827 KHDC3LQ587J8 217 aa9.97□□□□□ -0.81
GPN3-201ENST00000228827 Q6ZQT7 251 aa9.97□□□□□ -0.81
GPN3-201ENST00000228827 LINC00612Q8N6U2 182 aa9.97□□□□□ -0.81
GPN3-201ENST00000228827 Q9H3A6 140 aa9.97□□□□□ -0.81
GPN3-201ENST00000228827 GSN-AS1Q9NRJ2 163 aa9.97□□□□□ -0.81
GPN3-201ENST00000228827 ZNF492Q9P255 531 aa9.97□□□□□ -0.81
GPN3-201ENST00000228827 DNAH17Q9UFH2 4485 aa9.96□□□□□ -0.81
GPN3-201ENST00000228827 RTL8CO15255 209 aa9.96□□□□□ -0.82
GPN3-201ENST00000228827 PTTG1O95997 202 aa9.96□□□□□ -0.82
GPN3-201ENST00000228827 CRISP2P16562 243 aa9.96□□□□□ -0.82
GPN3-201ENST00000228827 CSN1S1P47710 185 aa9.96□□□□□ -0.82
GPN3-201ENST00000228827 Q6ZTI0 123 aa9.96□□□□□ -0.82
GPN3-201ENST00000228827 LINC00336Q6ZUF6 198 aa9.96□□□□□ -0.82
GPN3-201ENST00000228827 ZFAND2AQ8N6M9 145 aa9.96□□□□□ -0.82
GPN3-201ENST00000228827 MED28Q9H204 178 aa9.96□□□□□ -0.82
GPN3-201ENST00000228827 TRAV26-1A0A087WT03 109 aa9.95□□□□□ -0.82
GPN3-201ENST00000228827 A0A0J9YY99 117 aa9.95□□□□□ -0.82
GPN3-201ENST00000228827 HOXA5P20719 270 aa9.95□□□□□ -0.82
GPN3-201ENST00000228827 ZNF138P52744 262 aa9.95□□□□□ -0.82
GPN3-201ENST00000228827 TAS2R45P59539 299 aa9.95□□□□□ -0.82
GPN3-201ENST00000228827 EIF4E3Q8N5X7 224 aaKnown RBP9.95□□□□□ -0.82
GPN3-201ENST00000228827 HYLS1Q96M11 299 aa9.95□□□□□ -0.82
GPN3-201ENST00000228827 FAT2Q9NYQ8 4349 aa9.95□□□□□ -0.82
GPN3-201ENST00000228827 PRSS29PA6NIE9 313 aa9.94□□□□□ -0.82
GPN3-201ENST00000228827 M6PRP20645 277 aa9.94□□□□□ -0.82
GPN3-201ENST00000228827 RAB2AP61019 212 aa9.94□□□□□ -0.82
GPN3-201ENST00000228827 DAZ2Q13117 558 aaKnown RBP9.94□□□□□ -0.82
GPN3-201ENST00000228827 ACOT6Q3I5F7 207 aaPredicted RBP9.94□□□□□ -0.82
GPN3-201ENST00000228827 Q6ZR54 194 aa9.94□□□□□ -0.82
GPN3-201ENST00000228827 C11orf72Q8NBR9 251 aa9.94□□□□□ -0.82
GPN3-201ENST00000228827 ZNF680Q8NEM1 530 aa9.94□□□□□ -0.82
GPN3-201ENST00000228827 TMPRSS5Q9H3S3 457 aa9.94□□□□□ -0.82
GPN3-201ENST00000228827 TP53TG3Q9ULZ0 132 aa9.94□□□□□ -0.82
GPN3-201ENST00000228827 RPH3ALQ9UNE2 315 aa9.94□□□□□ -0.82
GPN3-201ENST00000228827 KLF12Q9Y4X4 402 aa9.94□□□□□ -0.82
GPN3-201ENST00000228827 A0A1W2PPV4 95 aa9.93□□□□□ -0.82
GPN3-201ENST00000228827 RGS13O14921 159 aa9.93□□□□□ -0.82
GPN3-201ENST00000228827 HMGB3O15347 200 aaKnown RBP9.93□□□□□ -0.82
GPN3-201ENST00000228827 ANXA2RQ3ZCQ2 193 aa9.93□□□□□ -0.82
GPN3-201ENST00000228827 LYPD1Q8N2G4 141 aa9.93□□□□□ -0.82
GPN3-201ENST00000228827 GNPNAT1Q96EK6 184 aaPredicted RBP9.93□□□□□ -0.82
GPN3-201ENST00000228827 LINC00467Q9BRT7 94 aa9.93□□□□□ -0.82
GPN3-201ENST00000228827 TRGV2A0A075B6R0 118 aa9.92□□□□□ -0.82
GPN3-201ENST00000228827 IGHV1OR15-1A0A075B7D0 117 aa9.92□□□□□ -0.82
GPN3-201ENST00000228827 TRGV1A0A0A0MS02 117 aa9.92□□□□□ -0.82
GPN3-201ENST00000228827 DIRC3C9JPN6 131 aa9.92□□□□□ -0.82
GPN3-201ENST00000228827 NMBP08949 121 aa9.92□□□□□ -0.82
GPN3-201ENST00000228827 CCL18P55774 89 aa9.92□□□□□ -0.82
GPN3-201ENST00000228827 Q5BKY6 102 aa9.92□□□□□ -0.82
GPN3-201ENST00000228827 OR10G4Q8NGN3 311 aa9.92□□□□□ -0.82
GPN3-201ENST00000228827 OR10G9Q8NGN4 311 aa9.92□□□□□ -0.82
GPN3-201ENST00000228827 OR10G7Q8NGN6 311 aa9.92□□□□□ -0.82
GPN3-201ENST00000228827 LINC00588Q9Y4M8 146 aa9.92□□□□□ -0.82
GPN3-201ENST00000228827 RBAKDNA6NC62 111 aa9.91□□□□□ -0.82
GPN3-201ENST00000228827 PGPA6NDG6 321 aa9.91□□□□□ -0.82
GPN3-201ENST00000228827 FAM3BP58499 235 aaPredicted RBP9.91□□□□□ -0.82
GPN3-201ENST00000228827 MUC21Q5SSG8 566 aa9.91□□□□□ -0.82
GPN3-201ENST00000228827 HSD17B11Q8NBQ5 300 aa9.91□□□□□ -0.82
GPN3-201ENST00000228827 ZNRF2Q8NHG8 242 aa9.91□□□□□ -0.82
GPN3-201ENST00000228827 ARPC5LQ9BPX5 153 aa9.91□□□□□ -0.82
GPN3-201ENST00000228827 OTORQ9NRC9 128 aa9.91□□□□□ -0.82
GPN3-201ENST00000228827 A0A1B0GVY2 172 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms