RNA–Protein interactions for RNA: ENST00000225519.3

SHPK-201, Transcript of sedoheptulokinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHPK, Length 3,838 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPK-201ENST00000225519 FAM27E3Q08E93 113 aa11.19□□□□□ -0.62
SHPK-201ENST00000225519 C12orf74Q32Q52 190 aa11.19□□□□□ -0.62
SHPK-201ENST00000225519 NCBP2LA6PVI3 153 aaKnown RBP11.19□□□□□ -0.62
SHPK-201ENST00000225519 E9PLD3 99 aa11.19□□□□□ -0.62
SHPK-201ENST00000225519 ATP5LO75964 103 aa11.19□□□□□ -0.62
SHPK-201ENST00000225519 NDUFA3O95167 84 aa11.19□□□□□ -0.62
SHPK-201ENST00000225519 TNFRSF6BO95407 300 aa11.19□□□□□ -0.62
SHPK-201ENST00000225519 APOMO95445 188 aa11.19□□□□□ -0.62
SHPK-201ENST00000225519 GATA1P15976 413 aaPredicted RBP11.19□□□□□ -0.62
SHPK-201ENST00000225519 RPEQ96AT9 228 aa11.19□□□□□ -0.62
SHPK-201ENST00000225519 K7EM74 188 aa11.18□□□□□ -0.62
SHPK-201ENST00000225519 CD40P25942 277 aa11.18□□□□□ -0.62
SHPK-201ENST00000225519 IGFL4Q6B9Z1 124 aa11.18□□□□□ -0.62
SHPK-201ENST00000225519 ZGRF1Q86YA3 2104 aa11.18□□□□□ -0.62
SHPK-201ENST00000225519 SFTA2Q6UW10 78 aa11.18□□□□□ -0.62
SHPK-201ENST00000225519 LINC00311Q8N616 119 aa11.18□□□□□ -0.62
SHPK-201ENST00000225519 MRPL35Q9NZE8 188 aaKnown RBP11.18□□□□□ -0.62
SHPK-201ENST00000225519 TRAV26-1A0A087WT03 109 aa11.17□□□□□ -0.62
SHPK-201ENST00000225519 IGHV1-8P0DP01 117 aa11.17□□□□□ -0.62
SHPK-201ENST00000225519 PVRIGQ6DKI7 326 aa11.17□□□□□ -0.62
SHPK-201ENST00000225519 SMPXQ9UHP9 88 aa11.17□□□□□ -0.62
SHPK-201ENST00000225519 HHLA3Q9XRX5 114 aa11.17□□□□□ -0.62
SHPK-201ENST00000225519 UFC1Q9Y3C8 167 aa11.17□□□□□ -0.62
SHPK-201ENST00000225519 I3L2K1 104 aa11.17□□□□□ -0.62
SHPK-201ENST00000225519 WT1P19544 449 aaPredicted RBP11.17□□□□□ -0.62
SHPK-201ENST00000225519 INSL3P51460 131 aa11.17□□□□□ -0.62
SHPK-201ENST00000225519 ZNF491Q8N8L2 437 aa11.17□□□□□ -0.62
SHPK-201ENST00000225519 TM2D2Q9BX73 214 aa11.17□□□□□ -0.62
SHPK-201ENST00000225519 ZNF462Q96JM2 2506 aa11.17□□□□□ -0.62
SHPK-201ENST00000225519 C17orf100A8MU93 164 aa11.17□□□□□ -0.62
SHPK-201ENST00000225519 GAS8-AS1O95177 125 aa11.17□□□□□ -0.62
SHPK-201ENST00000225519 GEMIN7Q9H840 131 aaKnown RBP11.17□□□□□ -0.62
SHPK-201ENST00000225519 DYNLRB1Q9NP97 96 aa11.17□□□□□ -0.62
SHPK-201ENST00000225519 TEX22C9J3V5 150 aa11.16□□□□□ -0.62
SHPK-201ENST00000225519 SRSF6Q13247 344 aaKnown RBP11.16□□□□□ -0.62
SHPK-201ENST00000225519 MRGPRG-AS1Q2M3A8 158 aa11.16□□□□□ -0.62
SHPK-201ENST00000225519 PRR25Q96S07 402 aa11.16□□□□□ -0.62
SHPK-201ENST00000225519 LOC107984156A0A0G2JMH3 177 aa11.16□□□□□ -0.62
SHPK-201ENST00000225519 ARL17AQ8IVW1 177 aa11.16□□□□□ -0.62
SHPK-201ENST00000225519 PHLDA1Q8WV24 401 aaPredicted RBP11.16□□□□□ -0.62
SHPK-201ENST00000225519 SHISA9B4DS77 424 aa11.16□□□□□ -0.62
SHPK-201ENST00000225519 MRAP2Q96G30 205 aa11.15□□□□□ -0.62
SHPK-201ENST00000225519 SPATA25Q9BR10 227 aa11.15□□□□□ -0.62
SHPK-201ENST00000225519 MAPKAPK5-AS1Q8N8E1 139 aa11.15□□□□□ -0.62
SHPK-201ENST00000225519 C20orf78Q9BR46 151 aa11.15□□□□□ -0.62
SHPK-201ENST00000225519 KLK15Q9H2R5 256 aa11.15□□□□□ -0.62
SHPK-201ENST00000225519 MRPL16Q9NX20 251 aaKnown RBP11.15□□□□□ -0.62
SHPK-201ENST00000225519 IGHV3OR16-8A0A075B7F1 116 aa11.15□□□□□ -0.63
SHPK-201ENST00000225519 IGHV1-3A0A0C4DH29 117 aa11.15□□□□□ -0.63
SHPK-201ENST00000225519 OR11H12B2RN74 326 aa11.15□□□□□ -0.63
SHPK-201ENST00000225519 LOXP28300 417 aaPredicted RBP11.15□□□□□ -0.63
SHPK-201ENST00000225519 RRN3P1Q2M238 152 aa11.15□□□□□ -0.63
SHPK-201ENST00000225519 OR11H1Q8NG94 326 aa11.15□□□□□ -0.63
SHPK-201ENST00000225519 OR11H2Q8NH07 326 aa11.15□□□□□ -0.63
SHPK-201ENST00000225519 CYSLTR1Q9Y271 337 aa11.15□□□□□ -0.63
SHPK-201ENST00000225519 TMEM178BH3BS89 294 aa11.14□□□□□ -0.63
SHPK-201ENST00000225519 SEM1Q6ZVN7 128 aa11.14□□□□□ -0.63
SHPK-201ENST00000225519 SYT8Q8NBV8 401 aa11.14□□□□□ -0.63
SHPK-201ENST00000225519 ZNF502Q8TBZ5 544 aa11.14□□□□□ -0.63
SHPK-201ENST00000225519 IGHV3-23P01764 117 aa11.14□□□□□ -0.63
SHPK-201ENST00000225519 ZNF418Q8TF45 676 aaPredicted RBP11.14□□□□□ -0.63
SHPK-201ENST00000225519 ZNF80P51504 273 aaPredicted RBP11.14□□□□□ -0.63
SHPK-201ENST00000225519 PAX8Q06710 450 aa11.14□□□□□ -0.63
SHPK-201ENST00000225519 HES1Q14469 280 aa11.14□□□□□ -0.63
SHPK-201ENST00000225519 IGHV3-35A0A0C4DH35 117 aa11.13□□□□□ -0.63
SHPK-201ENST00000225519 K7EIM0 57 aa11.13□□□□□ -0.63
SHPK-201ENST00000225519 SPINK8P0C7L1 97 aa11.13□□□□□ -0.63
SHPK-201ENST00000225519 RPL7P18124 248 aaKnown RBP11.13□□□□□ -0.63
SHPK-201ENST00000225519 CRYBA4P53673 196 aa11.13□□□□□ -0.63
SHPK-201ENST00000225519 PDE6HQ13956 83 aa11.13□□□□□ -0.63
SHPK-201ENST00000225519 PIFOQ8TCI5 191 aa11.13□□□□□ -0.63
SHPK-201ENST00000225519 TMEM190Q8WZ59 177 aa11.13□□□□□ -0.63
SHPK-201ENST00000225519 CTSZQ9UBR2 303 aa11.13□□□□□ -0.63
SHPK-201ENST00000225519 DMDP11532 3685 aa11.13□□□□□ -0.63
SHPK-201ENST00000225519 MBD3L4A6NDZ8 208 aaPredicted RBP11.13□□□□□ -0.63
SHPK-201ENST00000225519 MBD3L3A6NE82 208 aaPredicted RBP11.13□□□□□ -0.63
SHPK-201ENST00000225519 MBD3L5A6NJ08 208 aaPredicted RBP11.13□□□□□ -0.63
SHPK-201ENST00000225519 FABP5P3A8MUU1 101 aa11.13□□□□□ -0.63
SHPK-201ENST00000225519 DEFB109BQ30KR1 87 aa11.13□□□□□ -0.63
SHPK-201ENST00000225519 MBD3L2Q8NHZ7 208 aaPredicted RBP11.13□□□□□ -0.63
SHPK-201ENST00000225519 PRRG2O14669 202 aa11.13□□□□□ -0.63
SHPK-201ENST00000225519 HOXA3O43365 443 aaPredicted RBP11.13□□□□□ -0.63
SHPK-201ENST00000225519 FCN3O75636 299 aa11.13□□□□□ -0.63
SHPK-201ENST00000225519 TMEM155Q4W5P6 130 aa11.13□□□□□ -0.63
SHPK-201ENST00000225519 SCGB1D4Q6XE38 83 aa11.13□□□□□ -0.63
SHPK-201ENST00000225519 C22orf34Q6ZV56 151 aa11.13□□□□□ -0.63
SHPK-201ENST00000225519 PGPEP1Q9NXJ5 209 aa11.13□□□□□ -0.63
SHPK-201ENST00000225519 VSTM5A8MXK1 200 aa11.12□□□□□ -0.63
SHPK-201ENST00000225519 HLA-DMBP28068 263 aa11.12□□□□□ -0.63
SHPK-201ENST00000225519 SRSF1Q07955 248 aaKnown RBP eCLIP11.12□□□□□ -0.63
SHPK-201ENST00000225519 ABCA4P78363 2273 aa11.12□□□□□ -0.63
SHPK-201ENST00000225519 CDX4O14627 284 aaPredicted RBP11.12□□□□□ -0.63
SHPK-201ENST00000225519 CEACAM4O75871 244 aa11.12□□□□□ -0.63
SHPK-201ENST00000225519 PSMB2P49721 201 aa11.12□□□□□ -0.63
SHPK-201ENST00000225519 SRSF9Q13242 221 aaKnown RBP eCLIP11.12□□□□□ -0.63
SHPK-201ENST00000225519 TAL2Q16559 108 aa11.12□□□□□ -0.63
SHPK-201ENST00000225519 RNF185Q96GF1 192 aa11.12□□□□□ -0.63
SHPK-201ENST00000225519 MFAP4P55083 255 aa11.12□□□□□ -0.63
SHPK-201ENST00000225519 LINC01559Q495D7 138 aa11.12□□□□□ -0.63
SHPK-201ENST00000225519 Q8N8P6 123 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms