RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 C2orf66Q6UXQ4 117 aa8.42□□□□□ -1.06
TRPS1-201ENST00000220888 LINC01551Q86U37 167 aa8.42□□□□□ -1.06
TRPS1-201ENST00000220888 KLHDC3Q9BQ90 382 aa8.42□□□□□ -1.06
TRPS1-201ENST00000220888 FANCMQ8IYD8 2048 aa8.42□□□□□ -1.06
TRPS1-201ENST00000220888 DEFB136Q30KP8 78 aa8.42□□□□□ -1.06
TRPS1-201ENST00000220888 Q6ZQT7 251 aa8.42□□□□□ -1.06
TRPS1-201ENST00000220888 TRAV1-1A0A0B4J248 108 aa8.41□□□□□ -1.06
TRPS1-201ENST00000220888 J3QRE1 110 aa8.41□□□□□ -1.06
TRPS1-201ENST00000220888 Q6ZS49 121 aa8.41□□□□□ -1.06
TRPS1-201ENST00000220888 SH2D6Q7Z4S9 175 aa8.41□□□□□ -1.06
TRPS1-201ENST00000220888 NDUFA4L2Q9NRX3 87 aa8.41□□□□□ -1.06
TRPS1-201ENST00000220888 KIF13BQ9NQT8 1826 aa8.41□□□□□ -1.06
TRPS1-201ENST00000220888 GAGE2BQ13066 116 aa8.41□□□□□ -1.06
TRPS1-201ENST00000220888 SLX1AQ9BQ83 275 aa8.41□□□□□ -1.06
TRPS1-201ENST00000220888 SMAD5-AS1Q9Y6J3 95 aa8.41□□□□□ -1.06
TRPS1-201ENST00000220888 KIF26BQ2KJY2 2108 aa8.41□□□□□ -1.06
TRPS1-201ENST00000220888 DOCK4Q8N1I0 1966 aa8.41□□□□□ -1.06
TRPS1-201ENST00000220888 IGHV4-30-2A0A087WSY4 118 aa8.41□□□□□ -1.06
TRPS1-201ENST00000220888 FOXE3Q13461 319 aa8.41□□□□□ -1.06
TRPS1-201ENST00000220888 TM2D2Q9BX73 214 aa8.41□□□□□ -1.06
TRPS1-201ENST00000220888 GFRA4Q9GZZ7 299 aa8.41□□□□□ -1.06
TRPS1-201ENST00000220888 IGHV4-61A0A0C4DH41 118 aa8.41□□□□□ -1.06
TRPS1-201ENST00000220888 BUB3O43684 328 aa8.41□□□□□ -1.06
TRPS1-201ENST00000220888 Q6ZR03 302 aa8.41□□□□□ -1.06
TRPS1-201ENST00000220888 FER1L5A0AVI2 2057 aa8.41□□□□□ -1.06
TRPS1-201ENST00000220888 TRPM7Q96QT4 1865 aa8.41□□□□□ -1.06
TRPS1-201ENST00000220888 TRBV19A0A075B6N1 114 aa8.4□□□□□ -1.06
TRPS1-201ENST00000220888 XCL1P47992 114 aa8.4□□□□□ -1.06
TRPS1-201ENST00000220888 ZNF134P52741 427 aa8.4□□□□□ -1.06
TRPS1-201ENST00000220888 TUBGCP6Q96RT7 1819 aa8.4□□□□□ -1.06
TRPS1-201ENST00000220888 ETDCA0A1B0GVM5 59 aa8.4□□□□□ -1.06
TRPS1-201ENST00000220888 GFI1Q99684 422 aa8.4□□□□□ -1.06
TRPS1-201ENST00000220888 RBBP6Q7Z6E9 1792 aaKnown RBP8.4□□□□□ -1.06
TRPS1-201ENST00000220888 LY6G6EA0A0G2JKS1 128 aa8.4□□□□□ -1.07
TRPS1-201ENST00000220888 hADV29S1A0JD25 119 aa8.4□□□□□ -1.07
TRPS1-201ENST00000220888 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.4□□□□□ -1.07
TRPS1-201ENST00000220888 HOXB4P17483 251 aaPredicted RBP8.4□□□□□ -1.07
TRPS1-201ENST00000220888 SRSF2Q01130 221 aaKnown RBP8.4□□□□□ -1.07
TRPS1-201ENST00000220888 MRPL53Q96EL3 112 aaKnown RBP8.4□□□□□ -1.07
TRPS1-201ENST00000220888 U3KQA8 63 aa8.4□□□□□ -1.07
TRPS1-201ENST00000220888 U3KQE9 123 aa8.4□□□□□ -1.07
TRPS1-201ENST00000220888 GRNP28799 593 aaKnown RBP8.4□□□□□ -1.07
TRPS1-201ENST00000220888 HERVK_113P63121 156 aa8.4□□□□□ -1.07
TRPS1-201ENST00000220888 DSCR8Q96T75 97 aa8.4□□□□□ -1.07
TRPS1-201ENST00000220888 DUX4L9Q6RFH8 374 aaPredicted RBP8.39□□□□□ -1.07
TRPS1-201ENST00000220888 Q6ZWC4 215 aa8.39□□□□□ -1.07
TRPS1-201ENST00000220888 C15orf53Q8NAA6 179 aa8.39□□□□□ -1.07
TRPS1-201ENST00000220888 GSN-AS1Q9NRJ2 163 aa8.39□□□□□ -1.07
TRPS1-201ENST00000220888 FAM208BQ5VWN6 2430 aa8.39□□□□□ -1.07
TRPS1-201ENST00000220888 MED12Q93074 2177 aa8.39□□□□□ -1.07
TRPS1-201ENST00000220888 PYGO2Q9BRQ0 406 aa8.39□□□□□ -1.07
TRPS1-201ENST00000220888 PRSS46E5RG02 174 aa8.39□□□□□ -1.07
TRPS1-201ENST00000220888 HAMPP81172 84 aa8.39□□□□□ -1.07
TRPS1-201ENST00000220888 UBL5Q9BZL1 73 aa8.39□□□□□ -1.07
TRPS1-201ENST00000220888 TMEM213A2RRL7 107 aa8.39□□□□□ -1.07
TRPS1-201ENST00000220888 IGLV1-44P01699 117 aa8.39□□□□□ -1.07
TRPS1-201ENST00000220888 LINC00518Q8N0U6 118 aa8.39□□□□□ -1.07
TRPS1-201ENST00000220888 CAMK2N2Q96S95 79 aa8.39□□□□□ -1.07
TRPS1-201ENST00000220888 TIMM17AQ99595 171 aa8.39□□□□□ -1.07
TRPS1-201ENST00000220888 C17orf58Q2M2W7 97 aa8.38□□□□□ -1.07
TRPS1-201ENST00000220888 TCF20Q9UGU0 1960 aaKnown RBP8.38□□□□□ -1.07
TRPS1-201ENST00000220888 KAAG1Q9UBP8 84 aa8.38□□□□□ -1.07
TRPS1-201ENST00000220888 PLA2G5P39877 138 aa8.38□□□□□ -1.07
TRPS1-201ENST00000220888 SLURP1P55000 103 aa8.38□□□□□ -1.07
TRPS1-201ENST00000220888 ZNF492Q9P255 531 aa8.38□□□□□ -1.07
TRPS1-201ENST00000220888 IGHV3-30P01768 117 aa8.38□□□□□ -1.07
TRPS1-201ENST00000220888 IGHV3-33P01772 117 aa8.38□□□□□ -1.07
TRPS1-201ENST00000220888 IGHV3-30-3P0DP02 117 aa8.38□□□□□ -1.07
TRPS1-201ENST00000220888 IGHV3-30-5P0DP03 117 aa8.38□□□□□ -1.07
TRPS1-201ENST00000220888 CT83Q5H943 113 aa8.38□□□□□ -1.07
TRPS1-201ENST00000220888 WIPF2Q8TF74 440 aaPredicted RBP8.38□□□□□ -1.07
TRPS1-201ENST00000220888 PTPRQQ9UMZ3 2332 aa8.38□□□□□ -1.07
TRPS1-201ENST00000220888 SHISA9B4DS77 424 aa8.37□□□□□ -1.07
TRPS1-201ENST00000220888 H3BRN7 92 aa8.37□□□□□ -1.07
TRPS1-201ENST00000220888 Q8N8P6 123 aa8.37□□□□□ -1.07
TRPS1-201ENST00000220888 DEFB105AQ8NG35 78 aa8.37□□□□□ -1.07
TRPS1-201ENST00000220888 C16orf74Q96GX8 76 aa8.37□□□□□ -1.07
TRPS1-201ENST00000220888 FANCD2OSQ96PS1 177 aa8.37□□□□□ -1.07
TRPS1-201ENST00000220888 NDUFA12Q9UI09 145 aa8.37□□□□□ -1.07
TRPS1-201ENST00000220888 TRBV24-1A0A075B6N3 115 aa8.37□□□□□ -1.07
TRPS1-201ENST00000220888 LINC00479Q96M42 142 aa8.37□□□□□ -1.07
TRPS1-201ENST00000220888 GYPEP15421 78 aa8.37□□□□□ -1.07
TRPS1-201ENST00000220888 BTCP35070 178 aa8.37□□□□□ -1.07
TRPS1-201ENST00000220888 ZNF581Q9P0T4 197 aa8.37□□□□□ -1.07
TRPS1-201ENST00000220888 CLPSL1A2RUU4 121 aa8.37□□□□□ -1.07
TRPS1-201ENST00000220888 APRG1Q8IVJ8 170 aa8.37□□□□□ -1.07
TRPS1-201ENST00000220888 PRR25Q96S07 402 aa8.37□□□□□ -1.07
TRPS1-201ENST00000220888 PSME4Q14997 1843 aa8.37□□□□□ -1.07
TRPS1-201ENST00000220888 A0A1B0GW64 132 aa8.36□□□□□ -1.07
TRPS1-201ENST00000220888 hDV102S1A0JD36 115 aa8.36□□□□□ -1.07
TRPS1-201ENST00000220888 HIST1H2BKO60814 126 aa8.36□□□□□ -1.07
TRPS1-201ENST00000220888 HIST1H2BJP06899 126 aa8.36□□□□□ -1.07
TRPS1-201ENST00000220888 HIST1H2BOP23527 126 aa8.36□□□□□ -1.07
TRPS1-201ENST00000220888 HIST1H2BBP33778 126 aa8.36□□□□□ -1.07
TRPS1-201ENST00000220888 MYCNOSP40205 109 aa8.36□□□□□ -1.07
TRPS1-201ENST00000220888 UBE2AP49459 152 aa8.36□□□□□ -1.07
TRPS1-201ENST00000220888 HIST1H2BDP58876 126 aa8.36□□□□□ -1.07
TRPS1-201ENST00000220888 HIST1H2BCP62807 126 aa8.36□□□□□ -1.07
TRPS1-201ENST00000220888 SRSF3P84103 164 aaKnown RBP8.36□□□□□ -1.07
TRPS1-201ENST00000220888 HIST2H2BEQ16778 126 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms