RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 LINC01559Q495D7 138 aa10.31□□□□□ -0.76
SRP54-201ENST00000216774 MAP1LC3AQ9H492 121 aa10.31□□□□□ -0.76
SRP54-201ENST00000216774 SMKR1H3BMG3 65 aa10.31□□□□□ -0.76
SRP54-201ENST00000216774 HLA-DMBP28068 263 aa10.31□□□□□ -0.76
SRP54-201ENST00000216774 ADORA2A-AS1P86434 159 aa10.31□□□□□ -0.76
SRP54-201ENST00000216774 CDSNQ15517 529 aa10.31□□□□□ -0.76
SRP54-201ENST00000216774 C15orf32Q32M92 178 aa10.31□□□□□ -0.76
SRP54-201ENST00000216774 PSMG4Q5JS54 123 aa10.31□□□□□ -0.76
SRP54-201ENST00000216774 IGFL4Q6B9Z1 124 aa10.31□□□□□ -0.76
SRP54-201ENST00000216774 AMMECR1LQ6DCA0 310 aa10.31□□□□□ -0.76
SRP54-201ENST00000216774 RNF185Q96GF1 192 aa10.31□□□□□ -0.76
SRP54-201ENST00000216774 SLC50A1Q9BRV3 221 aa10.31□□□□□ -0.76
SRP54-201ENST00000216774 SIRPDQ9H106 197 aa10.31□□□□□ -0.76
SRP54-201ENST00000216774 ZFAND3Q9H8U3 227 aa10.31□□□□□ -0.76
SRP54-201ENST00000216774 C7orf71A4D174 169 aa10.3□□□□□ -0.76
SRP54-201ENST00000216774 SMAD7O15105 426 aaKnown RBP10.3□□□□□ -0.76
SRP54-201ENST00000216774 BUB3O43684 328 aa10.3□□□□□ -0.76
SRP54-201ENST00000216774 NDUFS7O75251 213 aa10.3□□□□□ -0.76
SRP54-201ENST00000216774 ERASQ7Z444 233 aa10.3□□□□□ -0.76
SRP54-201ENST00000216774 DTX2Q86UW9 622 aa10.3□□□□□ -0.76
SRP54-201ENST00000216774 SNAI2O43623 268 aa10.3□□□□□ -0.76
SRP54-201ENST00000216774 ZFP36P26651 326 aaKnown RBP10.3□□□□□ -0.76
SRP54-201ENST00000216774 PCP4P48539 62 aa10.3□□□□□ -0.76
SRP54-201ENST00000216774 FOXE3Q13461 319 aa10.3□□□□□ -0.76
SRP54-201ENST00000216774 PRSS57Q6UWY2 283 aa10.3□□□□□ -0.76
SRP54-201ENST00000216774 NXT2Q9NPJ8 142 aaKnown RBP10.3□□□□□ -0.76
SRP54-201ENST00000216774 A6NDN8 102 aa10.29□□□□□ -0.76
SRP54-201ENST00000216774 ARHGAP32A7KAX9 2087 aa10.29□□□□□ -0.76
SRP54-201ENST00000216774 GOSR1O95249 250 aa10.29□□□□□ -0.76
SRP54-201ENST00000216774 PIFOQ8TCI5 191 aa10.29□□□□□ -0.76
SRP54-201ENST00000216774 FXYD7P58549 80 aa10.28□□□□□ -0.76
SRP54-201ENST00000216774 HSD52Q0P140 79 aa10.28□□□□□ -0.76
SRP54-201ENST00000216774 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.28□□□□□ -0.76
SRP54-201ENST00000216774 OR4X2Q8NGF9 303 aa10.28□□□□□ -0.76
SRP54-201ENST00000216774 MSRB1Q9NZV6 116 aa10.28□□□□□ -0.76
SRP54-201ENST00000216774 IGHV3OR16-8A0A075B7F1 116 aa10.28□□□□□ -0.76
SRP54-201ENST00000216774 A1L4Q6 167 aa10.28□□□□□ -0.76
SRP54-201ENST00000216774 CLEC3BP05452 202 aa10.28□□□□□ -0.76
SRP54-201ENST00000216774 UBE2E1P51965 193 aa10.28□□□□□ -0.76
SRP54-201ENST00000216774 ERCC8Q13216 396 aa10.28□□□□□ -0.76
SRP54-201ENST00000216774 TRAV8-6A0A0B4J262 113 aa10.27□□□□□ -0.76
SRP54-201ENST00000216774 IGHV3-35A0A0C4DH35 117 aa10.27□□□□□ -0.76
SRP54-201ENST00000216774 PRAC2D3DTV9 90 aa10.27□□□□□ -0.76
SRP54-201ENST00000216774 TNFRSF6BO95407 300 aa10.27□□□□□ -0.76
SRP54-201ENST00000216774 FCER1GP30273 86 aa10.27□□□□□ -0.76
SRP54-201ENST00000216774 KLRB1Q12918 225 aa10.27□□□□□ -0.76
SRP54-201ENST00000216774 MRPL53Q96EL3 112 aaKnown RBP10.27□□□□□ -0.76
SRP54-201ENST00000216774 CEP295Q9C0D2 2601 aa10.27□□□□□ -0.77
SRP54-201ENST00000216774 CLPSL1A2RUU4 121 aa10.27□□□□□ -0.77
SRP54-201ENST00000216774 H3BRM9 83 aa10.27□□□□□ -0.77
SRP54-201ENST00000216774 ECSCRQ19T08 205 aa10.27□□□□□ -0.77
SRP54-201ENST00000216774 AJUBAQ96IF1 538 aa10.27□□□□□ -0.77
SRP54-201ENST00000216774 CST9LQ9H4G1 147 aa10.27□□□□□ -0.77
SRP54-201ENST00000216774 ATP6V0E1O15342 81 aa10.26□□□□□ -0.77
SRP54-201ENST00000216774 ADAMTSL5Q6ZMM2 481 aa10.26□□□□□ -0.77
SRP54-201ENST00000216774 IL17RELQ6ZVW7 336 aa10.26□□□□□ -0.77
SRP54-201ENST00000216774 RNF182Q8N6D2 247 aa10.26□□□□□ -0.77
SRP54-201ENST00000216774 CCDC140Q96MF4 163 aa10.26□□□□□ -0.77
SRP54-201ENST00000216774 ABCA4P78363 2273 aa10.26□□□□□ -0.77
SRP54-201ENST00000216774 HRNRQ86YZ3 2850 aaPredicted RBP10.26□□□□□ -0.77
SRP54-201ENST00000216774 LEPP41159 167 aa10.26□□□□□ -0.77
SRP54-201ENST00000216774 UCNP55089 124 aa10.26□□□□□ -0.77
SRP54-201ENST00000216774 ZMAT4Q9H898 229 aa10.26□□□□□ -0.77
SRP54-201ENST00000216774 HIF1ANQ9NWT6 349 aa10.26□□□□□ -0.77
SRP54-201ENST00000216774 PTPRQQ9UMZ3 2332 aa10.25□□□□□ -0.77
SRP54-201ENST00000216774 TRBV7-1A0A0A6YYK4 115 aa10.25□□□□□ -0.77
SRP54-201ENST00000216774 C9orf118A6NHY6 69 aa10.25□□□□□ -0.77
SRP54-201ENST00000216774 EEF1AKMT3Q96AZ1 226 aa10.25□□□□□ -0.77
SRP54-201ENST00000216774 DKK2Q9UBU2 259 aa10.25□□□□□ -0.77
SRP54-201ENST00000216774 OCIAD2Q56VL3 154 aa10.24□□□□□ -0.77
SRP54-201ENST00000216774 TMEM78Q5T7P6 136 aa10.24□□□□□ -0.77
SRP54-201ENST00000216774 METTL26Q96S19 204 aa10.24□□□□□ -0.77
SRP54-201ENST00000216774 AGPAT4-IT1Q9H0P7 198 aa10.24□□□□□ -0.77
SRP54-201ENST00000216774 MUC6Q6W4X9 2439 aa10.24□□□□□ -0.77
SRP54-201ENST00000216774 IGKV3D-20A0A0C4DH25 116 aa10.24□□□□□ -0.77
SRP54-201ENST00000216774 GAGE12BA1L429 117 aa10.24□□□□□ -0.77
SRP54-201ENST00000216774 NMUP48645 174 aa10.24□□□□□ -0.77
SRP54-201ENST00000216774 ODF1Q14990 250 aa10.24□□□□□ -0.77
SRP54-201ENST00000216774 CLEC19AQ6UXS0 136 aa10.24□□□□□ -0.77
SRP54-201ENST00000216774 Q8N8P6 123 aa10.24□□□□□ -0.77
SRP54-201ENST00000216774 C18orf15Q96N68 181 aa10.24□□□□□ -0.77
SRP54-201ENST00000216774 AP1S3Q96PC3 154 aa10.24□□□□□ -0.77
SRP54-201ENST00000216774 SMPXQ9UHP9 88 aa10.24□□□□□ -0.77
SRP54-201ENST00000216774 TRAV8-2A0A0B4J237 113 aa10.23□□□□□ -0.77
SRP54-201ENST00000216774 GAS8-AS1O95177 125 aa10.23□□□□□ -0.77
SRP54-201ENST00000216774 SAA4P35542 130 aa10.23□□□□□ -0.77
SRP54-201ENST00000216774 UQCRFS1P47985 274 aa10.23□□□□□ -0.77
SRP54-201ENST00000216774 GTF2H5Q6ZYL4 71 aa10.23□□□□□ -0.77
SRP54-201ENST00000216774 PCP2Q8IVA1 136 aa10.23□□□□□ -0.77
SRP54-201ENST00000216774 ATP6V0BQ99437 205 aa10.23□□□□□ -0.77
SRP54-201ENST00000216774 GAGE10A6NGK3 116 aa10.23□□□□□ -0.77
SRP54-201ENST00000216774 PRSS47A8MTI9 375 aa10.23□□□□□ -0.77
SRP54-201ENST00000216774 UFSP1Q6NVU6 142 aa10.23□□□□□ -0.77
SRP54-201ENST00000216774 C9orf47Q6ZRZ4 202 aa10.23□□□□□ -0.77
SRP54-201ENST00000216774 SMIM15Q7Z3B0 74 aa10.23□□□□□ -0.77
SRP54-201ENST00000216774 WFDC3Q8IUB2 231 aa10.23□□□□□ -0.77
SRP54-201ENST00000216774 C11orf21Q9P2W6 132 aa10.23□□□□□ -0.77
SRP54-201ENST00000216774 U3KQE9 123 aa10.23□□□□□ -0.77
SRP54-201ENST00000216774 IGLV2-18A0A075B6J9 118 aa10.22□□□□□ -0.77
SRP54-201ENST00000216774 IGHV3-66A0A0C4DH42 116 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms