RNA–Protein interactions for RNA: ENST00000215917.11

SRRD-201, Transcript of SRR1 domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRD, Length 4,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRD-201ENST00000215917 H0YJW9 148 aa11.93□□□□□ -0.5
SRRD-201ENST00000215917 MC5RP33032 325 aa11.93□□□□□ -0.5
SRRD-201ENST00000215917 C8orf49Q96NF6 230 aa11.93□□□□□ -0.5
SRRD-201ENST00000215917 IGKV3D-20A0A0C4DH25 116 aa11.92□□□□□ -0.5
SRRD-201ENST00000215917 SHISA9B4DS77 424 aa11.92□□□□□ -0.5
SRRD-201ENST00000215917 IGHV4-39P01824 125 aa11.92□□□□□ -0.5
SRRD-201ENST00000215917 CD3EP07766 207 aa11.92□□□□□ -0.5
SRRD-201ENST00000215917 ITPR1Q14643 2758 aa11.92□□□□□ -0.5
SRRD-201ENST00000215917 FCN3O75636 299 aa11.92□□□□□ -0.5
SRRD-201ENST00000215917 USP9XQ93008 2570 aaPredicted RBP11.92□□□□□ -0.5
SRRD-201ENST00000215917 LGALS7P47929 136 aa11.91□□□□□ -0.5
SRRD-201ENST00000215917 RHOGP84095 191 aa11.91□□□□□ -0.5
SRRD-201ENST00000215917 WT1-ASQ06250 92 aa11.91□□□□□ -0.5
SRRD-201ENST00000215917 TMEM158Q8WZ71 300 aa11.91□□□□□ -0.5
SRRD-201ENST00000215917 ANAPC13Q9BS18 74 aa11.91□□□□□ -0.5
SRRD-201ENST00000215917 SLC25A2Q9BXI2 301 aa11.91□□□□□ -0.5
SRRD-201ENST00000215917 ZNF256Q9Y2P7 627 aaPredicted RBP11.91□□□□□ -0.5
SRRD-201ENST00000215917 SMAD7O15105 426 aaKnown RBP11.91□□□□□ -0.5
SRRD-201ENST00000215917 MS4A6AQ9H2W1 248 aa11.91□□□□□ -0.5
SRRD-201ENST00000215917 TRAV12-3A0A0B4J271 114 aa11.91□□□□□ -0.5
SRRD-201ENST00000215917 SLC25A39Q9BZJ4 359 aaPredicted RBP11.91□□□□□ -0.5
SRRD-201ENST00000215917 SMIM27A0A1W2PRY6 76 aa11.9□□□□□ -0.5
SRRD-201ENST00000215917 SRD5A1P18405 259 aa11.9□□□□□ -0.5
SRRD-201ENST00000215917 DEFB125Q8N687 156 aa11.9□□□□□ -0.5
SRRD-201ENST00000215917 OR4X2Q8NGF9 303 aa11.9□□□□□ -0.5
SRRD-201ENST00000215917 RNF125Q96EQ8 232 aa11.9□□□□□ -0.5
SRRD-201ENST00000215917 CHAC1Q9BUX1 264 aa11.9□□□□□ -0.5
SRRD-201ENST00000215917 TRAV26-2A0A0B4J265 109 aa11.9□□□□□ -0.5
SRRD-201ENST00000215917 A0A1W2PPI3 338 aa11.9□□□□□ -0.5
SRRD-201ENST00000215917 IGKCP01834 107 aa11.9□□□□□ -0.5
SRRD-201ENST00000215917 TEX36Q5VZQ5 186 aa11.9□□□□□ -0.5
SRRD-201ENST00000215917 GATA1P15976 413 aaPredicted RBP11.9□□□□□ -0.5
SRRD-201ENST00000215917 PPP1R27Q86WC6 154 aa11.9□□□□□ -0.5
SRRD-201ENST00000215917 OR5A1Q8NGJ0 315 aa11.9□□□□□ -0.5
SRRD-201ENST00000215917 PKD1L2Q7Z442 2459 aa11.9□□□□□ -0.51
SRRD-201ENST00000215917 SPINK8P0C7L1 97 aa11.89□□□□□ -0.51
SRRD-201ENST00000215917 HERVK_113P61574 105 aa11.89□□□□□ -0.51
SRRD-201ENST00000215917 RAX2Q96IS3 184 aa11.89□□□□□ -0.51
SRRD-201ENST00000215917 C9orf118A6NHY6 69 aa11.89□□□□□ -0.51
SRRD-201ENST00000215917 ZNF815PA8K554 130 aa11.89□□□□□ -0.51
SRRD-201ENST00000215917 CRXO43186 299 aaPredicted RBP11.89□□□□□ -0.51
SRRD-201ENST00000215917 DPM2O94777 84 aa11.89□□□□□ -0.51
SRRD-201ENST00000215917 LOXP28300 417 aaPredicted RBP11.89□□□□□ -0.51
SRRD-201ENST00000215917 MFAP4P55083 255 aa11.89□□□□□ -0.51
SRRD-201ENST00000215917 PGPEP1Q9NXJ5 209 aa11.89□□□□□ -0.51
SRRD-201ENST00000215917 RAB9AP51151 201 aa11.89□□□□□ -0.51
SRRD-201ENST00000215917 GDF5OSQ5U4N7 250 aa11.89□□□□□ -0.51
SRRD-201ENST00000215917 FAM106CPP0CH98 169 aa11.89□□□□□ -0.51
SRRD-201ENST00000215917 LINC00310P59036 64 aa11.89□□□□□ -0.51
SRRD-201ENST00000215917 WFDC2Q14508 124 aa11.89□□□□□ -0.51
SRRD-201ENST00000215917 FAM106AQ4KMX7 169 aa11.89□□□□□ -0.51
SRRD-201ENST00000215917 FAM120AOSQ5T036 256 aa11.89□□□□□ -0.51
SRRD-201ENST00000215917 ATP5G2Q06055 141 aa11.88□□□□□ -0.51
SRRD-201ENST00000215917 KLRB1Q12918 225 aa11.88□□□□□ -0.51
SRRD-201ENST00000215917 ERCC8Q13216 396 aa11.88□□□□□ -0.51
SRRD-201ENST00000215917 ATP5L2Q7Z4Y8 100 aa11.88□□□□□ -0.51
SRRD-201ENST00000215917 MRPL52Q86TS9 123 aaKnown RBP11.88□□□□□ -0.51
SRRD-201ENST00000215917 OTORQ9NRC9 128 aa11.88□□□□□ -0.51
SRRD-201ENST00000215917 CSMD1Q96PZ7 3565 aa11.88□□□□□ -0.51
SRRD-201ENST00000215917 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.88□□□□□ -0.51
SRRD-201ENST00000215917 COX8AP10176 69 aa11.88□□□□□ -0.51
SRRD-201ENST00000215917 PRR20EP86478 221 aa11.88□□□□□ -0.51
SRRD-201ENST00000215917 PRR20CP86479 221 aa11.88□□□□□ -0.51
SRRD-201ENST00000215917 PRR20DP86480 221 aa11.88□□□□□ -0.51
SRRD-201ENST00000215917 PRR20BP86481 221 aa11.88□□□□□ -0.51
SRRD-201ENST00000215917 PRR20AP86496 221 aa11.88□□□□□ -0.51
SRRD-201ENST00000215917 MRPL36Q9P0J6 103 aaKnown RBP11.88□□□□□ -0.51
SRRD-201ENST00000215917 LY96Q9Y6Y9 160 aa11.88□□□□□ -0.51
SRRD-201ENST00000215917 TMEM238LA0A1B0GVL6 79 aa11.88□□□□□ -0.51
SRRD-201ENST00000215917 A6NJY4 79 aa11.88□□□□□ -0.51
SRRD-201ENST00000215917 DGAT2L7PQ6IED9 249 aa11.87□□□□□ -0.51
SRRD-201ENST00000215917 ZNF833PQ6ZTB9 187 aa11.87□□□□□ -0.51
SRRD-201ENST00000215917 APOBEC3AP31941 199 aaPredicted RBP11.87□□□□□ -0.51
SRRD-201ENST00000215917 EFNA4P52798 201 aa11.87□□□□□ -0.51
SRRD-201ENST00000215917 TMEM95Q3KNT9 176 aa11.87□□□□□ -0.51
SRRD-201ENST00000215917 SIGLEC8Q9NYZ4 499 aa11.87□□□□□ -0.51
SRRD-201ENST00000215917 TMEM8BA6NDV4 472 aa11.87□□□□□ -0.51
SRRD-201ENST00000215917 IGHV1-8P0DP01 117 aa11.87□□□□□ -0.51
SRRD-201ENST00000215917 UCNP55089 124 aa11.87□□□□□ -0.51
SRRD-201ENST00000215917 LYRM7Q5U5X0 104 aa11.87□□□□□ -0.51
SRRD-201ENST00000215917 HOXA3O43365 443 aaPredicted RBP11.86□□□□□ -0.51
SRRD-201ENST00000215917 SNCGO76070 127 aa11.86□□□□□ -0.51
SRRD-201ENST00000215917 IGHV3-11P01762 117 aa11.86□□□□□ -0.51
SRRD-201ENST00000215917 LOXL1Q08397 574 aaPredicted RBP11.86□□□□□ -0.51
SRRD-201ENST00000215917 C11orf52Q96A22 123 aa11.86□□□□□ -0.51
SRRD-201ENST00000215917 HRNRQ86YZ3 2850 aaPredicted RBP11.86□□□□□ -0.51
SRRD-201ENST00000215917 SH2D1AO60880 128 aa11.86□□□□□ -0.51
SRRD-201ENST00000215917 NPYP01303 97 aa11.86□□□□□ -0.51
SRRD-201ENST00000215917 NDPQ00604 133 aa11.86□□□□□ -0.51
SRRD-201ENST00000215917 Q86TA4 180 aa11.86□□□□□ -0.51
SRRD-201ENST00000215917 NDUFA4L2Q9NRX3 87 aa11.86□□□□□ -0.51
SRRD-201ENST00000215917 MSRB1Q9NZV6 116 aa11.86□□□□□ -0.51
SRRD-201ENST00000215917 TRAV2A0A0B4J234 112 aa11.86□□□□□ -0.51
SRRD-201ENST00000215917 HLA-DMBP28068 263 aa11.86□□□□□ -0.51
SRRD-201ENST00000215917 CLEC19AQ6UXS0 136 aa11.86□□□□□ -0.51
SRRD-201ENST00000215917 NEGR1Q7Z3B1 354 aa11.86□□□□□ -0.51
SRRD-201ENST00000215917 SYT8Q8NBV8 401 aa11.86□□□□□ -0.51
SRRD-201ENST00000215917 C8orf46Q8TAG6 207 aa11.86□□□□□ -0.51
SRRD-201ENST00000215917 ZFYVE26Q68DK2 2539 aa11.85□□□□□ -0.51
SRRD-201ENST00000215917 A0A1W2PPM0 123 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms