RNA–Protein interactions for RNA: ENST00000175091.4

LAPTM4A-201, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4A, Length 1,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-201ENST00000175091 GPR61Q9BZJ8 451 aa11.82□□□□□ -0.52
LAPTM4A-201ENST00000175091 NAT8BQ9UHF3 227 aa11.82□□□□□ -0.52
LAPTM4A-201ENST00000175091 IZUMO1RA6ND01 250 aa11.82□□□□□ -0.52
LAPTM4A-201ENST00000175091 C5orf52A6NGY3 159 aa11.82□□□□□ -0.52
LAPTM4A-201ENST00000175091 S100A6P06703 90 aa11.82□□□□□ -0.52
LAPTM4A-201ENST00000175091 TCF24Q7RTU0 167 aa11.82□□□□□ -0.52
LAPTM4A-201ENST00000175091 WFDC12Q8WWY7 111 aa11.82□□□□□ -0.52
LAPTM4A-201ENST00000175091 HIGD1CA8MV81 97 aa11.81□□□□□ -0.52
LAPTM4A-201ENST00000175091 A8MWL6 223 aa11.81□□□□□ -0.52
LAPTM4A-201ENST00000175091 LINC01619G3V211 115 aa11.81□□□□□ -0.52
LAPTM4A-201ENST00000175091 RPL19P84098 196 aaKnown RBP11.81□□□□□ -0.52
LAPTM4A-201ENST00000175091 ERCC8Q13216 396 aa11.81□□□□□ -0.52
LAPTM4A-201ENST00000175091 KLF5Q13887 457 aaPredicted RBP11.81□□□□□ -0.52
LAPTM4A-201ENST00000175091 KHDC1LQ5JSQ8 128 aa11.81□□□□□ -0.52
LAPTM4A-201ENST00000175091 NUP35Q8NFH5 326 aa11.81□□□□□ -0.52
LAPTM4A-201ENST00000175091 LINC01006Q8NI28 216 aa11.81□□□□□ -0.52
LAPTM4A-201ENST00000175091 GFRA4Q9GZZ7 299 aa11.81□□□□□ -0.52
LAPTM4A-201ENST00000175091 HIVEP1P15822 2718 aa11.81□□□□□ -0.52
LAPTM4A-201ENST00000175091 FRMD6-AS1P0C7T7 363 aa11.8□□□□□ -0.52
LAPTM4A-201ENST00000175091 SNRPEP62304 92 aaKnown RBP11.8□□□□□ -0.52
LAPTM4A-201ENST00000175091 RPL11P62913 178 aaKnown RBP11.8□□□□□ -0.52
LAPTM4A-201ENST00000175091 C9orf47Q6ZRZ4 202 aa11.8□□□□□ -0.52
LAPTM4A-201ENST00000175091 KLHL30-AS1Q8NEE0 82 aa11.8□□□□□ -0.52
LAPTM4A-201ENST00000175091 DCANP1Q8TF63 244 aa11.8□□□□□ -0.52
LAPTM4A-201ENST00000175091 GTSF1Q8WW33 167 aa11.8□□□□□ -0.52
LAPTM4A-201ENST00000175091 NDFIP1Q9BT67 221 aa11.8□□□□□ -0.52
LAPTM4A-201ENST00000175091 FAM231BA6NCW3 169 aa11.79□□□□□ -0.52
LAPTM4A-201ENST00000175091 C2orf70A6NJV1 201 aa11.79□□□□□ -0.52
LAPTM4A-201ENST00000175091 CBLN1P23435 193 aa11.79□□□□□ -0.52
LAPTM4A-201ENST00000175091 SLURP1P55000 103 aa11.79□□□□□ -0.52
LAPTM4A-201ENST00000175091 FABP9Q0Z7S8 132 aa11.79□□□□□ -0.52
LAPTM4A-201ENST00000175091 SAMD13Q5VXD3 122 aa11.79□□□□□ -0.52
LAPTM4A-201ENST00000175091 ZNF738Q8NE65 137 aa11.79□□□□□ -0.52
LAPTM4A-201ENST00000175091 OR11H1Q8NG94 326 aa11.79□□□□□ -0.52
LAPTM4A-201ENST00000175091 OR2D3Q8NGH3 330 aa11.79□□□□□ -0.52
LAPTM4A-201ENST00000175091 JMJD8Q96S16 334 aa11.79□□□□□ -0.52
LAPTM4A-201ENST00000175091 AGPAT4-IT1Q9H0P7 198 aa11.79□□□□□ -0.52
LAPTM4A-201ENST00000175091 SAV1Q9H4B6 383 aaPredicted RBP11.79□□□□□ -0.52
LAPTM4A-201ENST00000175091 TRAPPC1Q9Y5R8 145 aa11.79□□□□□ -0.52
LAPTM4A-201ENST00000175091 UBE2CO00762 179 aa11.79□□□□□ -0.52
LAPTM4A-201ENST00000175091 SPINK4O60575 86 aa11.79□□□□□ -0.52
LAPTM4A-201ENST00000175091 SH2D1AO60880 128 aa11.79□□□□□ -0.52
LAPTM4A-201ENST00000175091 FAM162BQ5T6X4 162 aa11.79□□□□□ -0.52
LAPTM4A-201ENST00000175091 GNB1LQ9BYB4 327 aa11.79□□□□□ -0.52
LAPTM4A-201ENST00000175091 PPP1R14DQ9NXH3 145 aa11.79□□□□□ -0.52
LAPTM4A-201ENST00000175091 IGKV3-7A0A075B6H7 116 aa11.78□□□□□ -0.52
LAPTM4A-201ENST00000175091 FOSL1P15407 271 aa11.78□□□□□ -0.52
LAPTM4A-201ENST00000175091 COX19Q49B96 90 aa11.78□□□□□ -0.52
LAPTM4A-201ENST00000175091 SMUG1Q53HV7 270 aa11.78□□□□□ -0.52
LAPTM4A-201ENST00000175091 TMEM78Q5T7P6 136 aa11.78□□□□□ -0.52
LAPTM4A-201ENST00000175091 MRPL54Q6P161 138 aaKnown RBP11.78□□□□□ -0.52
LAPTM4A-201ENST00000175091 RASL11AQ6T310 242 aa11.78□□□□□ -0.52
LAPTM4A-201ENST00000175091 SELENOKQ9Y6D0 94 aa11.78□□□□□ -0.52
LAPTM4A-201ENST00000175091 SETXQ7Z333 2677 aaKnown RBP11.78□□□□□ -0.52
LAPTM4A-201ENST00000175091 SNURFLB1AK76 121 aa11.77□□□□□ -0.52
LAPTM4A-201ENST00000175091 INAFM1C9JVW0 142 aa11.77□□□□□ -0.52
LAPTM4A-201ENST00000175091 NDUFA7O95182 113 aa11.77□□□□□ -0.52
LAPTM4A-201ENST00000175091 MT-ND6P03923 174 aa11.77□□□□□ -0.52
LAPTM4A-201ENST00000175091 ZNF80P51504 273 aaPredicted RBP11.77□□□□□ -0.52
LAPTM4A-201ENST00000175091 ZNF138P52744 262 aa11.77□□□□□ -0.52
LAPTM4A-201ENST00000175091 WDR73Q6P4I2 378 aa11.77□□□□□ -0.52
LAPTM4A-201ENST00000175091 ATP5L2Q7Z4Y8 100 aa11.77□□□□□ -0.52
LAPTM4A-201ENST00000175091 OR1N2Q8NGR9 330 aa11.77□□□□□ -0.52
LAPTM4A-201ENST00000175091 OVOL1O14753 267 aa11.77□□□□□ -0.53
LAPTM4A-201ENST00000175091 HIST2H2BDQ6DRA6 164 aa11.77□□□□□ -0.53
LAPTM4A-201ENST00000175091 ADAMTSL5Q6ZMM2 481 aa11.77□□□□□ -0.53
LAPTM4A-201ENST00000175091 TMEM136Q6ZRR5 245 aa11.77□□□□□ -0.53
LAPTM4A-201ENST00000175091 SETD2Q9BYW2 2564 aaPredicted RBP11.76□□□□□ -0.53
LAPTM4A-201ENST00000175091 A0A1B0GXF2 115 aa11.76□□□□□ -0.53
LAPTM4A-201ENST00000175091 CD28P10747 220 aa11.76□□□□□ -0.53
LAPTM4A-201ENST00000175091 RBPMS2Q6ZRY4 209 aaKnown RBP11.76□□□□□ -0.53
LAPTM4A-201ENST00000175091 DPF1Q92782 380 aa11.76□□□□□ -0.53
LAPTM4A-201ENST00000175091 DUX3Q96PT4 197 aa11.76□□□□□ -0.53
LAPTM4A-201ENST00000175091 MRPL18Q9H0U6 180 aaKnown RBP11.76□□□□□ -0.53
LAPTM4A-201ENST00000175091 MS4A6AQ9H2W1 248 aa11.76□□□□□ -0.53
LAPTM4A-201ENST00000175091 GZMBP10144 247 aa11.75□□□□□ -0.53
LAPTM4A-201ENST00000175091 FOXA3P55318 350 aaPredicted RBP11.75□□□□□ -0.53
LAPTM4A-201ENST00000175091 NDUFA6P56556 154 aa11.75□□□□□ -0.53
LAPTM4A-201ENST00000175091 FHL3Q13643 280 aa11.75□□□□□ -0.53
LAPTM4A-201ENST00000175091 OR9G4Q8NGQ1 327 aa11.75□□□□□ -0.53
LAPTM4A-201ENST00000175091 LENEPQ9Y5L5 61 aa11.75□□□□□ -0.53
LAPTM4A-201ENST00000175091 M0QZ24 198 aa11.74□□□□□ -0.53
LAPTM4A-201ENST00000175091 HLA-DQA1P01909 254 aa11.74□□□□□ -0.53
LAPTM4A-201ENST00000175091 ID1P41134 155 aa11.74□□□□□ -0.53
LAPTM4A-201ENST00000175091 C11orf44Q8N8P7 122 aa11.74□□□□□ -0.53
LAPTM4A-201ENST00000175091 PEMTQ9UBM1 199 aa11.74□□□□□ -0.53
LAPTM4A-201ENST00000175091 FLNBO75369 2602 aaKnown RBP11.74□□□□□ -0.53
LAPTM4A-201ENST00000175091 FN1P02751 2386 aaKnown RBP11.74□□□□□ -0.53
LAPTM4A-201ENST00000175091 ZNF705DP0CH99 300 aaPredicted RBP11.74□□□□□ -0.53
LAPTM4A-201ENST00000175091 ZNF705BP0CI00 300 aaPredicted RBP11.74□□□□□ -0.53
LAPTM4A-201ENST00000175091 DEFB1P60022 68 aa11.74□□□□□ -0.53
LAPTM4A-201ENST00000175091 SRSF2Q01130 221 aaKnown RBP11.74□□□□□ -0.53
LAPTM4A-201ENST00000175091 Q6AWC8 147 aa11.74□□□□□ -0.53
LAPTM4A-201ENST00000175091 OR8A1Q8NGG7 326 aa11.74□□□□□ -0.53
LAPTM4A-201ENST00000175091 OR10J6PQ8NGY7 276 aa11.74□□□□□ -0.53
LAPTM4A-201ENST00000175091 DLX4Q92988 240 aaPredicted RBP11.74□□□□□ -0.53
LAPTM4A-201ENST00000175091 PGLYRP4Q96LB8 373 aa11.74□□□□□ -0.53
LAPTM4A-201ENST00000175091 CITED2Q99967 270 aaPredicted RBP11.74□□□□□ -0.53
LAPTM4A-201ENST00000175091 TMEM189A5PLL7 270 aa11.73□□□□□ -0.53
LAPTM4A-201ENST00000175091 K7EQG2 157 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms