RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 TSTD3H0UI37 97 aa14.99□□□□□ -0.01
TNFRSF1A-201ENST00000162749 LTAP01374 205 aa14.99□□□□□ -0.01
TNFRSF1A-201ENST00000162749 CRISP2P16562 243 aa14.99□□□□□ -0.01
TNFRSF1A-201ENST00000162749 MLST8Q9BVC4 326 aa14.99□□□□□ -0.01
TNFRSF1A-201ENST00000162749 IGHV7-4-1A0A0J9YVY3 117 aa14.98□□□□□ -0.01
TNFRSF1A-201ENST00000162749 MRPL54Q6P161 138 aaKnown RBP14.98□□□□□ -0.01
TNFRSF1A-201ENST00000162749 WIPF2Q8TF74 440 aaPredicted RBP14.98□□□□□ -0.01
TNFRSF1A-201ENST00000162749 A0A1W2PS18 150 aa14.98□□□□□ -0.01
TNFRSF1A-201ENST00000162749 IZUMO1RA6ND01 250 aa14.98□□□□□ -0.01
TNFRSF1A-201ENST00000162749 INAFM1C9JVW0 142 aa14.98□□□□□ -0.01
TNFRSF1A-201ENST00000162749 K7EMT4 169 aa14.98□□□□□ -0.01
TNFRSF1A-201ENST00000162749 HLA-DMBP28068 263 aa14.98□□□□□ -0.01
TNFRSF1A-201ENST00000162749 PRR27Q6MZM9 219 aa14.98□□□□□ -0.01
TNFRSF1A-201ENST00000162749 C18orf65Q6ZTR6 163 aa14.98□□□□□ -0.01
TNFRSF1A-201ENST00000162749 Q86TA4 180 aa14.98□□□□□ -0.01
TNFRSF1A-201ENST00000162749 TMEM75Q8N9X5 138 aa14.98□□□□□ -0.01
TNFRSF1A-201ENST00000162749 NAT8BQ9UHF3 227 aa14.98□□□□□ -0.01
TNFRSF1A-201ENST00000162749 F2Z2F3 143 aa14.97□□□□□ -0.01
TNFRSF1A-201ENST00000162749 EDN2P20800 178 aa14.97□□□□□ -0.01
TNFRSF1A-201ENST00000162749 WDR73Q6P4I2 378 aa14.97□□□□□ -0.01
TNFRSF1A-201ENST00000162749 C8orf86Q6ZUL3 223 aa14.97□□□□□ -0.01
TNFRSF1A-201ENST00000162749 SMIM12Q96EX1 92 aa14.97□□□□□ -0.01
TNFRSF1A-201ENST00000162749 GRAMD2BQ96HH9 432 aa14.97□□□□□ -0.01
TNFRSF1A-201ENST00000162749 SLC50A1Q9BRV3 221 aa14.97□□□□□ -0.01
TNFRSF1A-201ENST00000162749 RHPN1-AS1Q9BWJ2 59 aa14.97□□□□□ -0.01
TNFRSF1A-201ENST00000162749 K7EQM0 130 aa14.97□□□□□ -0.01
TNFRSF1A-201ENST00000162749 CSN1S1P47710 185 aa14.97□□□□□ -0.01
TNFRSF1A-201ENST00000162749 LINC00322Q6ZN03 302 aaPredicted RBP14.97□□□□□ -0.01
TNFRSF1A-201ENST00000162749 PRO1933Q9H354 126 aa14.97□□□□□ -0.01
TNFRSF1A-201ENST00000162749 MT-ND6P03923 174 aa14.96□□□□□ -0.01
TNFRSF1A-201ENST00000162749 RPL19P84098 196 aaKnown RBP14.96□□□□□ -0.01
TNFRSF1A-201ENST00000162749 Q0VG73 95 aa14.96□□□□□ -0.01
TNFRSF1A-201ENST00000162749 ARL6IP6Q8N6S5 226 aa14.96□□□□□ -0.01
TNFRSF1A-201ENST00000162749 SERF1AO75920 110 aa14.96□□□□□ -0.02
TNFRSF1A-201ENST00000162749 ESDP10768 282 aa14.96□□□□□ -0.02
TNFRSF1A-201ENST00000162749 HOXD3P31249 432 aaPredicted RBP14.96□□□□□ -0.02
TNFRSF1A-201ENST00000162749 PSG3Q16557 428 aa14.96□□□□□ -0.02
TNFRSF1A-201ENST00000162749 DEFB136Q30KP8 78 aa14.96□□□□□ -0.02
TNFRSF1A-201ENST00000162749 KIAA1644Q3SXP7 199 aa14.96□□□□□ -0.02
TNFRSF1A-201ENST00000162749 COX19Q49B96 90 aa14.96□□□□□ -0.02
TNFRSF1A-201ENST00000162749 RNF182Q8N6D2 247 aa14.96□□□□□ -0.02
TNFRSF1A-201ENST00000162749 LINC01006Q8NI28 216 aa14.96□□□□□ -0.02
TNFRSF1A-201ENST00000162749 SMPXQ9UHP9 88 aa14.96□□□□□ -0.02
TNFRSF1A-201ENST00000162749 UFC1Q9Y3C8 167 aa14.96□□□□□ -0.02
TNFRSF1A-201ENST00000162749 TRAV8-2A0A0B4J237 113 aa14.95□□□□□ -0.02
TNFRSF1A-201ENST00000162749 TMEM213A2RRL7 107 aa14.95□□□□□ -0.02
TNFRSF1A-201ENST00000162749 ZNF705FA8MVS1 300 aaPredicted RBP14.95□□□□□ -0.02
TNFRSF1A-201ENST00000162749 CHEK1O14757 476 aa14.95□□□□□ -0.02
TNFRSF1A-201ENST00000162749 PRNTQ86SH4 94 aa14.95□□□□□ -0.02
TNFRSF1A-201ENST00000162749 NUP35Q8NFH5 326 aa14.95□□□□□ -0.02
TNFRSF1A-201ENST00000162749 C16orf95Q9H693 158 aa14.95□□□□□ -0.02
TNFRSF1A-201ENST00000162749 TRBV6-1A0A0K0K1D8 114 aa14.94□□□□□ -0.02
TNFRSF1A-201ENST00000162749 A8MWP6 167 aa14.94□□□□□ -0.02
TNFRSF1A-201ENST00000162749 KHDC1LQ5JSQ8 128 aa14.94□□□□□ -0.02
TNFRSF1A-201ENST00000162749 C4orf3Q8WVX3 66 aa14.94□□□□□ -0.02
TNFRSF1A-201ENST00000162749 SERTM2A0A1B0GWG4 89 aa14.94□□□□□ -0.02
TNFRSF1A-201ENST00000162749 SYNJ2BPP57105 145 aa14.94□□□□□ -0.02
TNFRSF1A-201ENST00000162749 RAB4BP61018 213 aa14.94□□□□□ -0.02
TNFRSF1A-201ENST00000162749 HIST2H2BDQ6DRA6 164 aa14.94□□□□□ -0.02
TNFRSF1A-201ENST00000162749 LCN12Q6JVE5 192 aa14.94□□□□□ -0.02
TNFRSF1A-201ENST00000162749 SORL1Q92673 2214 aa14.93□□□□□ -0.02
TNFRSF1A-201ENST00000162749 IGKV2-40A0A087WW87 121 aaPredicted RBP14.93□□□□□ -0.02
TNFRSF1A-201ENST00000162749 IGKV2D-40P01614 121 aaPredicted RBP14.93□□□□□ -0.02
TNFRSF1A-201ENST00000162749 TSKUQ8WUA8 353 aa14.93□□□□□ -0.02
TNFRSF1A-201ENST00000162749 JMJD8Q96S16 334 aa14.93□□□□□ -0.02
TNFRSF1A-201ENST00000162749 PSG8Q9UQ74 426 aa14.93□□□□□ -0.02
TNFRSF1A-201ENST00000162749 LGALS9O00182 355 aa14.93□□□□□ -0.02
TNFRSF1A-201ENST00000162749 HLA-DQA1P01909 254 aa14.93□□□□□ -0.02
TNFRSF1A-201ENST00000162749 LBHQ53QV2 105 aaPredicted RBP14.93□□□□□ -0.02
TNFRSF1A-201ENST00000162749 GDF5OSQ5U4N7 250 aa14.93□□□□□ -0.02
TNFRSF1A-201ENST00000162749 ZNF664Q8N3J9 261 aa14.93□□□□□ -0.02
TNFRSF1A-201ENST00000162749 NEU1Q99519 415 aa14.93□□□□□ -0.02
TNFRSF1A-201ENST00000162749 C2orf88Q9BSF0 95 aa14.93□□□□□ -0.02
TNFRSF1A-201ENST00000162749 BTF3P20290 206 aaKnown RBP14.92□□□□□ -0.02
TNFRSF1A-201ENST00000162749 BAGE3Q86Y29 109 aa14.92□□□□□ -0.02
TNFRSF1A-201ENST00000162749 ASCL2Q99929 193 aa14.92□□□□□ -0.02
TNFRSF1A-201ENST00000162749 JMJD1CQ15652 2540 aa14.92□□□□□ -0.02
TNFRSF1A-201ENST00000162749 C19orf71A6NCJ1 209 aa14.92□□□□□ -0.02
TNFRSF1A-201ENST00000162749 KLHL30-AS1Q8NEE0 82 aa14.92□□□□□ -0.02
TNFRSF1A-201ENST00000162749 OR11H1Q8NG94 326 aa14.92□□□□□ -0.02
TNFRSF1A-201ENST00000162749 ZFP30Q9Y2G7 519 aa14.92□□□□□ -0.02
TNFRSF1A-201ENST00000162749 SELENOKQ9Y6D0 94 aa14.92□□□□□ -0.02
TNFRSF1A-201ENST00000162749 HIGD1CA8MV81 97 aa14.91□□□□□ -0.02
TNFRSF1A-201ENST00000162749 RPL11P62913 178 aaKnown RBP14.91□□□□□ -0.02
TNFRSF1A-201ENST00000162749 SLAQ13239 276 aa14.91□□□□□ -0.02
TNFRSF1A-201ENST00000162749 NRN1Q9NPD7 142 aa14.91□□□□□ -0.02
TNFRSF1A-201ENST00000162749 PRAC2D3DTV9 90 aa14.9□□□□□ -0.02
TNFRSF1A-201ENST00000162749 SOCS3O14543 225 aa14.9□□□□□ -0.02
TNFRSF1A-201ENST00000162749 SLURP1P55000 103 aa14.9□□□□□ -0.02
TNFRSF1A-201ENST00000162749 KLF5Q13887 457 aaPredicted RBP14.9□□□□□ -0.02
TNFRSF1A-201ENST00000162749 RASL11AQ6T310 242 aa14.9□□□□□ -0.02
TNFRSF1A-201ENST00000162749 C11orf44Q8N8P7 122 aa14.9□□□□□ -0.02
TNFRSF1A-201ENST00000162749 C16orf92Q96LL3 132 aa14.9□□□□□ -0.02
TNFRSF1A-201ENST00000162749 CD33P20138 364 aa14.9□□□□□ -0.02
TNFRSF1A-201ENST00000162749 PAFAH1B2P68402 229 aa14.9□□□□□ -0.02
TNFRSF1A-201ENST00000162749 Q6ZWC4 215 aa14.9□□□□□ -0.02
TNFRSF1A-201ENST00000162749 VGLL1Q99990 258 aa14.9□□□□□ -0.02
TNFRSF1A-201ENST00000162749 ZNF492Q9P255 531 aa14.9□□□□□ -0.02
TNFRSF1A-201ENST00000162749 LINC01619G3V211 115 aa14.89□□□□□ -0.03
TNFRSF1A-201ENST00000162749 APCSP02743 223 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms