RNA–Protein interactions for RNA: ENST00000080059.11

HDAC7-201, Transcript of histone deacetylase 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HDAC7, Length 4,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-201ENST00000080059 JKAMPQ9P055 326 aa10.34□□□□□ -0.75
HDAC7-201ENST00000080059 PEMTQ9UBM1 199 aa10.34□□□□□ -0.75
HDAC7-201ENST00000080059 COL5A1P20908 1838 aaPredicted RBP10.34□□□□□ -0.75
HDAC7-201ENST00000080059 IGHV7-81A0A0B4J1V7 117 aa10.34□□□□□ -0.75
HDAC7-201ENST00000080059 TRAV12-3A0A0B4J271 114 aa10.34□□□□□ -0.75
HDAC7-201ENST00000080059 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.34□□□□□ -0.75
HDAC7-201ENST00000080059 J3QR89 54 aa10.34□□□□□ -0.75
HDAC7-201ENST00000080059 NUTF2P61970 127 aaKnown RBP10.34□□□□□ -0.75
HDAC7-201ENST00000080059 Q0VG73 95 aa10.34□□□□□ -0.75
HDAC7-201ENST00000080059 SAMD13Q5VXD3 122 aa10.34□□□□□ -0.75
HDAC7-201ENST00000080059 FAM231DQ6ZW35 169 aa10.34□□□□□ -0.75
HDAC7-201ENST00000080059 PRR25Q96S07 402 aa10.34□□□□□ -0.75
HDAC7-201ENST00000080059 FN1P02751 2386 aaKnown RBP10.34□□□□□ -0.75
HDAC7-201ENST00000080059 I3L2K1 104 aa10.34□□□□□ -0.75
HDAC7-201ENST00000080059 PRSS2P07478 247 aa10.34□□□□□ -0.75
HDAC7-201ENST00000080059 C1orf194Q5T5A4 169 aa10.34□□□□□ -0.75
HDAC7-201ENST00000080059 FAM167A-AS1Q96KT0 104 aa10.34□□□□□ -0.75
HDAC7-201ENST00000080059 TMEM14CQ9P0S9 112 aa10.34□□□□□ -0.75
HDAC7-201ENST00000080059 CENPVL3A0A0U1RRI6 287 aa10.33□□□□□ -0.76
HDAC7-201ENST00000080059 EIF4EBP1Q13541 118 aaPredicted RBP10.33□□□□□ -0.76
HDAC7-201ENST00000080059 MRPL27Q9P0M9 148 aaKnown RBP10.33□□□□□ -0.76
HDAC7-201ENST00000080059 SZT2Q5T011 3432 aa10.33□□□□□ -0.76
HDAC7-201ENST00000080059 PSMB2P49721 201 aa10.33□□□□□ -0.76
HDAC7-201ENST00000080059 Q5PR19 223 aa10.33□□□□□ -0.76
HDAC7-201ENST00000080059 DNLZQ5SXM8 178 aa10.33□□□□□ -0.76
HDAC7-201ENST00000080059 ERASQ7Z444 233 aa10.33□□□□□ -0.76
HDAC7-201ENST00000080059 TMEM75Q8N9X5 138 aa10.33□□□□□ -0.76
HDAC7-201ENST00000080059 ZC2HC1AQ96GY0 325 aa10.33□□□□□ -0.76
HDAC7-201ENST00000080059 ZNF492Q9P255 531 aa10.33□□□□□ -0.76
HDAC7-201ENST00000080059 IGHV4-30-2A0A087WSY4 118 aa10.33□□□□□ -0.76
HDAC7-201ENST00000080059 A8MWP6 167 aa10.33□□□□□ -0.76
HDAC7-201ENST00000080059 PPP1R17O96001 155 aa10.33□□□□□ -0.76
HDAC7-201ENST00000080059 TTC9CQ8N5M4 171 aa10.33□□□□□ -0.76
HDAC7-201ENST00000080059 LINC00477Q96M19 166 aa10.33□□□□□ -0.76
HDAC7-201ENST00000080059 NDUFA3O95167 84 aa10.33□□□□□ -0.76
HDAC7-201ENST00000080059 PET117Q6UWS5 81 aa10.33□□□□□ -0.76
HDAC7-201ENST00000080059 IL17RELQ6ZVW7 336 aa10.33□□□□□ -0.76
HDAC7-201ENST00000080059 C14orf178Q8N769 122 aaPredicted RBP10.32□□□□□ -0.76
HDAC7-201ENST00000080059 VGLL1Q99990 258 aa10.32□□□□□ -0.76
HDAC7-201ENST00000080059 TNFRSF18Q9Y5U5 241 aa10.32□□□□□ -0.76
HDAC7-201ENST00000080059 GAGE10A6NGK3 116 aa10.32□□□□□ -0.76
HDAC7-201ENST00000080059 IFI27P40305 119 aaPredicted RBP10.32□□□□□ -0.76
HDAC7-201ENST00000080059 DMRTA1Q5VZB9 504 aa10.32□□□□□ -0.76
HDAC7-201ENST00000080059 AMMECR1LQ6DCA0 310 aa10.32□□□□□ -0.76
HDAC7-201ENST00000080059 C8orf86Q6ZUL3 223 aa10.32□□□□□ -0.76
HDAC7-201ENST00000080059 PYGO2Q9BRQ0 406 aa10.32□□□□□ -0.76
HDAC7-201ENST00000080059 LINC00574Q9H8X3 128 aa10.32□□□□□ -0.76
HDAC7-201ENST00000080059 COL4A2P08572 1712 aa10.32□□□□□ -0.76
HDAC7-201ENST00000080059 SMIM27A0A1W2PRY6 76 aa10.32□□□□□ -0.76
HDAC7-201ENST00000080059 TEX22C9J3V5 150 aa10.32□□□□□ -0.76
HDAC7-201ENST00000080059 GATA3P23771 443 aa10.32□□□□□ -0.76
HDAC7-201ENST00000080059 DTX2Q86UW9 622 aa10.32□□□□□ -0.76
HDAC7-201ENST00000080059 hDV102S1A0JD36 115 aa10.31□□□□□ -0.76
HDAC7-201ENST00000080059 DUSP14O95147 198 aaKnown RBP10.31□□□□□ -0.76
HDAC7-201ENST00000080059 IGHV4-38-2P0DP08 117 aa10.31□□□□□ -0.76
HDAC7-201ENST00000080059 GFRA4Q9GZZ7 299 aa10.31□□□□□ -0.76
HDAC7-201ENST00000080059 PRRC2AP48634 2157 aaKnown RBP10.31□□□□□ -0.76
HDAC7-201ENST00000080059 BLCAPP62952 87 aa10.31□□□□□ -0.76
HDAC7-201ENST00000080059 CT83Q5H943 113 aa10.31□□□□□ -0.76
HDAC7-201ENST00000080059 TMEM190Q8WZ59 177 aa10.31□□□□□ -0.76
HDAC7-201ENST00000080059 FAM231BA6NCW3 169 aa10.31□□□□□ -0.76
HDAC7-201ENST00000080059 Q8N9W7 124 aa10.31□□□□□ -0.76
HDAC7-201ENST00000080059 ZNF462Q96JM2 2506 aa10.31□□□□□ -0.76
HDAC7-201ENST00000080059 IGKV3OR2-268A0A0C4DH90 116 aa10.3□□□□□ -0.76
HDAC7-201ENST00000080059 SRSF1Q07955 248 aaKnown RBP eCLIP10.3□□□□□ -0.769e-8■□□□□ 9.9
HDAC7-201ENST00000080059 H7C1H1 209 aa10.3□□□□□ -0.76
HDAC7-201ENST00000080059 CDPF1Q6NVV7 123 aa10.3□□□□□ -0.76
HDAC7-201ENST00000080059 Q96MF0 132 aa10.3□□□□□ -0.76
HDAC7-201ENST00000080059 IGLV11-55A0A075B6I3 123 aa10.3□□□□□ -0.76
HDAC7-201ENST00000080059 H7C2G1 150 aa10.3□□□□□ -0.76
HDAC7-201ENST00000080059 GP9P14770 177 aa10.3□□□□□ -0.76
HDAC7-201ENST00000080059 RCHY1Q96PM5 261 aa10.3□□□□□ -0.76
HDAC7-201ENST00000080059 ALKBH7Q9BT30 221 aaPredicted RBP10.3□□□□□ -0.76
HDAC7-201ENST00000080059 ST20Q9HBF5 79 aa10.3□□□□□ -0.76
HDAC7-201ENST00000080059 PKD1L2Q7Z442 2459 aa10.29□□□□□ -0.76
HDAC7-201ENST00000080059 LOC107984156A0A0G2JMH3 177 aa10.29□□□□□ -0.76
HDAC7-201ENST00000080059 SYS1-DBNDD2H3BUS1 97 aa10.29□□□□□ -0.76
HDAC7-201ENST00000080059 CTSGP08311 255 aa10.29□□□□□ -0.76
HDAC7-201ENST00000080059 EMP1P54849 157 aa10.29□□□□□ -0.76
HDAC7-201ENST00000080059 CYB5R2Q6BCY4 276 aa10.29□□□□□ -0.76
HDAC7-201ENST00000080059 Q6ZWC4 215 aa10.29□□□□□ -0.76
HDAC7-201ENST00000080059 ARL17AQ8IVW1 177 aa10.29□□□□□ -0.76
HDAC7-201ENST00000080059 KLHL30-AS1Q8NEE0 82 aa10.29□□□□□ -0.76
HDAC7-201ENST00000080059 NPBQ8NG41 125 aa10.29□□□□□ -0.76
HDAC7-201ENST00000080059 STHQ8IWL8 128 aa10.29□□□□□ -0.76
HDAC7-201ENST00000080059 IGHV4-59P01825 116 aa10.29□□□□□ -0.76
HDAC7-201ENST00000080059 TMEM95Q3KNT9 176 aa10.29□□□□□ -0.76
HDAC7-201ENST00000080059 POLR3KQ9Y2Y1 108 aaPredicted RBP10.28□□□□□ -0.76
HDAC7-201ENST00000080059 FRMD6-AS1P0C7T7 363 aa10.28□□□□□ -0.76
HDAC7-201ENST00000080059 C19orf84I3L1E1 186 aa10.28□□□□□ -0.76
HDAC7-201ENST00000080059 LGALS3P17931 250 aaKnown RBP10.28□□□□□ -0.76
HDAC7-201ENST00000080059 GEMIN7Q9H840 131 aaKnown RBP10.28□□□□□ -0.76
HDAC7-201ENST00000080059 VPS13AQ96RL7 3174 aa10.28□□□□□ -0.76
HDAC7-201ENST00000080059 LTAP01374 205 aa10.28□□□□□ -0.76
HDAC7-201ENST00000080059 DEFB112Q30KQ8 113 aa10.28□□□□□ -0.76
HDAC7-201ENST00000080059 ZNF503Q96F45 646 aa10.28□□□□□ -0.76
HDAC7-201ENST00000080059 INS-IGF2F8WCM5 200 aa10.27□□□□□ -0.77
HDAC7-201ENST00000080059 FAM104BQ5XKR9 115 aa10.27□□□□□ -0.77
HDAC7-201ENST00000080059 JMJD8Q96S16 334 aa10.27□□□□□ -0.77
HDAC7-201ENST00000080059 CBY1Q9Y3M2 126 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms