RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 IGLV11-55A0A075B6I3 123 aa10.92□□□□□ -0.66
USH1C-201ENST00000005226 IGKV2D-26A0A0A0MRZ7 120 aa10.92□□□□□ -0.66
USH1C-201ENST00000005226 C9orf118A6NHY6 69 aa10.92□□□□□ -0.66
USH1C-201ENST00000005226 C21orf62Q9NYP8 219 aa10.92□□□□□ -0.66
USH1C-201ENST00000005226 C5orf64Q2M2E5 130 aa10.92□□□□□ -0.66
USH1C-201ENST00000005226 ADAMTSL5Q6ZMM2 481 aa10.92□□□□□ -0.66
USH1C-201ENST00000005226 RNF182Q8N6D2 247 aa10.92□□□□□ -0.66
USH1C-201ENST00000005226 A0A0G2JLM5 398 aa10.91□□□□□ -0.66
USH1C-201ENST00000005226 FAM90A27PA6NNH2 459 aa10.91□□□□□ -0.66
USH1C-201ENST00000005226 RPS20P60866 119 aaKnown RBP10.91□□□□□ -0.66
USH1C-201ENST00000005226 UFSP1Q6NVU6 142 aa10.91□□□□□ -0.66
USH1C-201ENST00000005226 RNF185Q96GF1 192 aa10.91□□□□□ -0.66
USH1C-201ENST00000005226 HRNRQ86YZ3 2850 aaPredicted RBP10.91□□□□□ -0.66
USH1C-201ENST00000005226 H3BRM9 83 aa10.91□□□□□ -0.66
USH1C-201ENST00000005226 LEPP41159 167 aa10.91□□□□□ -0.66
USH1C-201ENST00000005226 RNF5Q99942 180 aa10.91□□□□□ -0.66
USH1C-201ENST00000005226 SPTBN1Q01082 2364 aaKnown RBP10.9□□□□□ -0.66
USH1C-201ENST00000005226 IGHV3-49A0A0A0MS15 119 aa10.9□□□□□ -0.66
USH1C-201ENST00000005226 A6NDN8 102 aa10.9□□□□□ -0.66
USH1C-201ENST00000005226 CTSGP08311 255 aa10.9□□□□□ -0.66
USH1C-201ENST00000005226 PDE6HQ13956 83 aa10.9□□□□□ -0.66
USH1C-201ENST00000005226 Q6ZQT7 251 aa10.9□□□□□ -0.66
USH1C-201ENST00000005226 OR1N2Q8NGR9 330 aa10.9□□□□□ -0.66
USH1C-201ENST00000005226 ARPC1AQ92747 370 aa10.9□□□□□ -0.66
USH1C-201ENST00000005226 RAB1BQ9H0U4 201 aa10.9□□□□□ -0.66
USH1C-201ENST00000005226 HSD52Q0P140 79 aa10.89□□□□□ -0.67
USH1C-201ENST00000005226 AKAP6Q13023 2319 aa10.89□□□□□ -0.67
USH1C-201ENST00000005226 PRSS1P07477 247 aa10.89□□□□□ -0.67
USH1C-201ENST00000005226 IGLC6P0CF74 106 aa10.89□□□□□ -0.67
USH1C-201ENST00000005226 SRSF8Q9BRL6 282 aaKnown RBP10.89□□□□□ -0.67
USH1C-201ENST00000005226 K7ERJ3 54 aa10.88□□□□□ -0.67
USH1C-201ENST00000005226 K7ERU9 68 aa10.88□□□□□ -0.67
USH1C-201ENST00000005226 NDUFA3O95167 84 aa10.88□□□□□ -0.67
USH1C-201ENST00000005226 RPL7P18124 248 aaKnown RBP10.88□□□□□ -0.67
USH1C-201ENST00000005226 GCSHP23434 173 aa10.88□□□□□ -0.67
USH1C-201ENST00000005226 GTSCR1Q86UQ5 136 aa10.88□□□□□ -0.67
USH1C-201ENST00000005226 NPBQ8NG41 125 aa10.88□□□□□ -0.67
USH1C-201ENST00000005226 OR2K2Q8NGT1 345 aa10.88□□□□□ -0.67
USH1C-201ENST00000005226 TNFRSF6BO95407 300 aa10.87□□□□□ -0.67
USH1C-201ENST00000005226 IL17RELQ6ZVW7 336 aa10.87□□□□□ -0.67
USH1C-201ENST00000005226 GTF2H5Q6ZYL4 71 aa10.87□□□□□ -0.67
USH1C-201ENST00000005226 LY6G5BQ8NDX9 201 aa10.87□□□□□ -0.67
USH1C-201ENST00000005226 DPF1Q92782 380 aa10.87□□□□□ -0.67
USH1C-201ENST00000005226 K7EP34 96 aa10.87□□□□□ -0.67
USH1C-201ENST00000005226 ZNF207O43670 478 aaKnown RBP10.87□□□□□ -0.67
USH1C-201ENST00000005226 TMEM11P17152 192 aa10.87□□□□□ -0.67
USH1C-201ENST00000005226 FXYD2P54710 66 aa10.87□□□□□ -0.67
USH1C-201ENST00000005226 ZNF562Q6V9R5 426 aa10.87□□□□□ -0.67
USH1C-201ENST00000005226 OR9G4Q8NGQ1 327 aa10.87□□□□□ -0.67
USH1C-201ENST00000005226 CSTL1Q9H114 145 aa10.87□□□□□ -0.67
USH1C-201ENST00000005226 MAP1LC3AQ9H492 121 aa10.87□□□□□ -0.67
USH1C-201ENST00000005226 TRAV26-2A0A0B4J265 109 aa10.86□□□□□ -0.67
USH1C-201ENST00000005226 TRGV3P03979 118 aa10.86□□□□□ -0.67
USH1C-201ENST00000005226 CDSNQ15517 529 aa10.86□□□□□ -0.67
USH1C-201ENST00000005226 SMIM15Q7Z3B0 74 aa10.86□□□□□ -0.67
USH1C-201ENST00000005226 OR11H6Q8NGC7 330 aa10.86□□□□□ -0.67
USH1C-201ENST00000005226 SPCS1Q9Y6A9 102 aa10.86□□□□□ -0.67
USH1C-201ENST00000005226 ATRXP46100 2492 aa10.86□□□□□ -0.67
USH1C-201ENST00000005226 SPRY2O43597 315 aa10.86□□□□□ -0.67
USH1C-201ENST00000005226 BMI1P35226 326 aa10.86□□□□□ -0.67
USH1C-201ENST00000005226 TMEM158Q8WZ71 300 aa10.86□□□□□ -0.67
USH1C-201ENST00000005226 FOXC2Q99958 501 aa10.86□□□□□ -0.67
USH1C-201ENST00000005226 C11orf21Q9P2W6 132 aa10.86□□□□□ -0.67
USH1C-201ENST00000005226 HHLA3Q9XRX5 114 aa10.86□□□□□ -0.67
USH1C-201ENST00000005226 ODF1Q14990 250 aa10.86□□□□□ -0.67
USH1C-201ENST00000005226 TTC9CQ8N5M4 171 aa10.86□□□□□ -0.67
USH1C-201ENST00000005226 PSMG3-AS1Q96PY0 264 aa10.86□□□□□ -0.67
USH1C-201ENST00000005226 A0A1W2PPM0 123 aa10.85□□□□□ -0.67
USH1C-201ENST00000005226 FABP5P3A8MUU1 101 aa10.85□□□□□ -0.67
USH1C-201ENST00000005226 OR4X2Q8NGF9 303 aa10.85□□□□□ -0.67
USH1C-201ENST00000005226 CEACAM3P40198 252 aa10.85□□□□□ -0.67
USH1C-201ENST00000005226 DTX2Q86UW9 622 aa10.85□□□□□ -0.67
USH1C-201ENST00000005226 FBLL1A6NHQ2 334 aaKnown RBP10.84□□□□□ -0.67
USH1C-201ENST00000005226 ECSCRQ19T08 205 aa10.84□□□□□ -0.67
USH1C-201ENST00000005226 ARL6IP6Q8N6S5 226 aa10.84□□□□□ -0.67
USH1C-201ENST00000005226 TMEM160Q9NX00 188 aa10.84□□□□□ -0.67
USH1C-201ENST00000005226 IGKV3D-20A0A0C4DH25 116 aa10.84□□□□□ -0.67
USH1C-201ENST00000005226 CLEC3BP05452 202 aa10.84□□□□□ -0.67
USH1C-201ENST00000005226 FCER1GP30273 86 aa10.84□□□□□ -0.67
USH1C-201ENST00000005226 ZFHX3Q15911 3703 aa10.84□□□□□ -0.67
USH1C-201ENST00000005226 PTPRQQ9UMZ3 2332 aa10.83□□□□□ -0.68
USH1C-201ENST00000005226 IGHV7-81A0A0B4J1V7 117 aa10.83□□□□□ -0.68
USH1C-201ENST00000005226 COX8CQ7Z4L0 72 aa10.83□□□□□ -0.68
USH1C-201ENST00000005226 VMO1Q7Z5L0 202 aa10.83□□□□□ -0.68
USH1C-201ENST00000005226 S100A7AQ86SG5 101 aa10.83□□□□□ -0.68
USH1C-201ENST00000005226 COL25A1Q9BXS0 654 aaPredicted RBP10.83□□□□□ -0.68
USH1C-201ENST00000005226 TMEM8BA6NDV4 472 aa10.83□□□□□ -0.68
USH1C-201ENST00000005226 LINC01548A6NM66 108 aa10.83□□□□□ -0.68
USH1C-201ENST00000005226 ODF3BA8MYP8 253 aa10.83□□□□□ -0.68
USH1C-201ENST00000005226 SIVA1O15304 175 aa10.83□□□□□ -0.68
USH1C-201ENST00000005226 C15orf32Q32M92 178 aa10.83□□□□□ -0.68
USH1C-201ENST00000005226 ZC2HC1BQ5TFG8 222 aa10.83□□□□□ -0.68
USH1C-201ENST00000005226 SAMD5Q5TGI4 173 aa10.83□□□□□ -0.68
USH1C-201ENST00000005226 TRAV40A0A0B4J280 105 aa10.82□□□□□ -0.68
USH1C-201ENST00000005226 J3KRW8 73 aa10.82□□□□□ -0.68
USH1C-201ENST00000005226 SMIM13P0DJ93 91 aa10.82□□□□□ -0.68
USH1C-201ENST00000005226 PRTN3P24158 256 aa10.82□□□□□ -0.68
USH1C-201ENST00000005226 MAPKAPK5-AS1Q8N8E1 139 aa10.82□□□□□ -0.68
USH1C-201ENST00000005226 AGPAT4-IT1Q9H0P7 198 aa10.82□□□□□ -0.68
USH1C-201ENST00000005226 UFC1Q9Y3C8 167 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms