RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Tmem70Q921N7 253 aa18.43■□□□□ 0.54
Scn1b-201ENSMUST00000098548 Gm5093E9PZB3 174 aa18.42■□□□□ 0.54
Scn1b-201ENSMUST00000098548 Rab2aP53994 212 aa18.42■□□□□ 0.54
Scn1b-201ENSMUST00000098548 Gnb2P62880 340 aa18.42■□□□□ 0.54
Scn1b-201ENSMUST00000098548 Coq2Q66JT7 374 aa18.42■□□□□ 0.54
Scn1b-201ENSMUST00000098548 Ube2d2bQ6ZWY6 147 aa18.42■□□□□ 0.54
Scn1b-201ENSMUST00000098548 Ankrd55Q8BLD6 626 aa18.42■□□□□ 0.54
Scn1b-201ENSMUST00000098548 Cdpf1Q8R3A2 119 aa18.42■□□□□ 0.54
Scn1b-201ENSMUST00000098548 0610009B22RikQ8R3W2 140 aa18.42■□□□□ 0.54
Scn1b-201ENSMUST00000098548 Olfr508Q8VG42 310 aa18.42■□□□□ 0.54
Scn1b-201ENSMUST00000098548 Mpped1Q91ZG2 326 aa18.42■□□□□ 0.54
Scn1b-201ENSMUST00000098548 Tmem51Q99LG1 249 aa18.42■□□□□ 0.54
Scn1b-201ENSMUST00000098548 Gm28778A0A087WSK7 233 aa18.42■□□□□ 0.54
Scn1b-201ENSMUST00000098548 Zfp493E9Q1L8 384 aa18.42■□□□□ 0.54
Scn1b-201ENSMUST00000098548 Gm21882J3QN86 361 aa18.42■□□□□ 0.54
Scn1b-201ENSMUST00000098548 ShbgP97497 403 aa18.42■□□□□ 0.54
Scn1b-201ENSMUST00000098548 Nhlh2Q64221 135 aa18.42■□□□□ 0.54
Scn1b-201ENSMUST00000098548 Slc35e3Q6PGC7 313 aa18.42■□□□□ 0.54
Scn1b-201ENSMUST00000098548 Dnd1Q6VY05 352 aa18.42■□□□□ 0.54
Scn1b-201ENSMUST00000098548 Olfr1173Q7TR24 312 aa18.42■□□□□ 0.54
Scn1b-201ENSMUST00000098548 Sft2d2Q8VD57 159 aa18.42■□□□□ 0.54
Scn1b-201ENSMUST00000098548 Olfr129Q8VEY1 330 aa18.42■□□□□ 0.54
Scn1b-201ENSMUST00000098548 Olfr303Q8VFP0 319 aa18.42■□□□□ 0.54
Scn1b-201ENSMUST00000098548 Olfr482Q8VG03 323 aa18.42■□□□□ 0.54
Scn1b-201ENSMUST00000098548 Olfr362Q8VGV7 317 aa18.42■□□□□ 0.54
Scn1b-201ENSMUST00000098548 Ms4a3Q920C4 213 aa18.42■□□□□ 0.54
Scn1b-201ENSMUST00000098548 Mrpl3Q99N95 348 aa18.42■□□□□ 0.54
Scn1b-201ENSMUST00000098548 Ssbp3Q9D032 388 aa18.42■□□□□ 0.54
Scn1b-201ENSMUST00000098548 Gng13Q9JMF3 67 aa18.42■□□□□ 0.54
Scn1b-201ENSMUST00000098548 Vmn1r128L7N2B4 307 aa18.41■□□□□ 0.54
Scn1b-201ENSMUST00000098548 PomcP01193 235 aa18.41■□□□□ 0.54
Scn1b-201ENSMUST00000098548 Gcm1P70348 436 aa18.41■□□□□ 0.54
Scn1b-201ENSMUST00000098548 Q08AU9 97 aa18.41■□□□□ 0.54
Scn1b-201ENSMUST00000098548 Sft2d1Q5SSN7 159 aa18.41■□□□□ 0.54
Scn1b-201ENSMUST00000098548 RhovQ8VDU1 236 aa18.41■□□□□ 0.54
Scn1b-201ENSMUST00000098548 Elovl1Q9JLJ5 279 aa18.41■□□□□ 0.54
Scn1b-201ENSMUST00000098548 Qrich2A0A140LIY9 2337 aa18.41■□□□□ 0.54
Scn1b-201ENSMUST00000098548 Gosr1O88630 250 aa18.4■□□□□ 0.54
Scn1b-201ENSMUST00000098548 P01726 129 aa18.4■□□□□ 0.54
Scn1b-201ENSMUST00000098548 Ucp1P12242 307 aa18.4■□□□□ 0.54
Scn1b-201ENSMUST00000098548 AmelxP63277 210 aa18.4■□□□□ 0.54
Scn1b-201ENSMUST00000098548 Dlx6P70397 175 aa18.4■□□□□ 0.54
Scn1b-201ENSMUST00000098548 SlaQ60898 281 aa18.4■□□□□ 0.54
Scn1b-201ENSMUST00000098548 Morn2Q6UL01 79 aa18.4■□□□□ 0.54
Scn1b-201ENSMUST00000098548 Aqp6Q8C4A0 293 aa18.4■□□□□ 0.54
Scn1b-201ENSMUST00000098548 OtosQ8R448 89 aa18.4■□□□□ 0.54
Scn1b-201ENSMUST00000098548 GgactQ923B0 149 aa18.4■□□□□ 0.54
Scn1b-201ENSMUST00000098548 4933407L21RikQ9D476 131 aa18.4■□□□□ 0.54
Scn1b-201ENSMUST00000098548 Tln2Q71LX4 2375 aa18.4■□□□□ 0.54
Scn1b-201ENSMUST00000098548 Akap13E9Q394 2776 aa18.39■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Gm5239D3YYZ2 122 aa18.39■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Hist1h1bP43276 223 aaKnown RBP18.39■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Serf2P84102 59 aa18.39■□□□□ 0.53
Scn1b-201ENSMUST00000098548 F13bQ07968 669 aa18.39■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Tff1Q08423 87 aa18.39■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Olfr1204Q7TR10 309 aa18.39■□□□□ 0.53
Scn1b-201ENSMUST00000098548 BC049762Q8C601 163 aa18.39■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Rwdd3Q8VIL2 267 aa18.39■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Hsbp1Q9CQZ1 76 aa18.39■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Fkbp11Q9D1M7 201 aa18.39■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Alkbh7Q9D6Z0 221 aa18.39■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Znf22Q9ERU3 237 aa18.39■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Eny2Q9JIX0 101 aaKnown RBP18.39■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Gm7697A0A0J9YUH2 350 aa18.38■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Gm9495A0A0J9YUZ3 350 aa18.38■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Vmn1r5B2RQT2 315 aa18.38■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Vmn1r160E9Q346 307 aa18.38■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Olfr1154L7MU57 310 aa18.38■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Vmn1r123L7N270 307 aa18.38■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Lgals9O08573 353 aaKnown RBP18.38■□□□□ 0.53
Scn1b-201ENSMUST00000098548 BokO35425 213 aa18.38■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Iglc2P01844 104 aa18.38■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Fgf4P11403 202 aa18.38■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Klk1b22P15948 259 aa18.38■□□□□ 0.53
Scn1b-201ENSMUST00000098548 P18528 98 aa18.38■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Oprk1P33534 380 aa18.38■□□□□ 0.53
Scn1b-201ENSMUST00000098548 FshbQ60687 130 aa18.38■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Q8BN57 294 aa18.38■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Phf13Q8K2W6 296 aa18.38■□□□□ 0.53
Scn1b-201ENSMUST00000098548 TdhQ8K3F7 373 aa18.38■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Foxn4Q8K3Q3 521 aa18.38■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Pcgf1Q8R023 259 aaKnown RBP18.38■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Galnt11Q921L8 608 aa18.38■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Tmem147Q9CQG6 224 aa18.38■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Tmem50aQ9CXL1 157 aa18.38■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Eaf1Q9D4C5 268 aa18.38■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Mrpl30Q9D7N6 160 aa18.38■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Trem3Q9JKE1 183 aa18.38■□□□□ 0.53
Scn1b-201ENSMUST00000098548 P01796 113 aa18.38■□□□□ 0.53
Scn1b-201ENSMUST00000098548 P01797 113 aa18.38■□□□□ 0.53
Scn1b-201ENSMUST00000098548 P01799 113 aa18.38■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Svs5P30933 122 aa18.38■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Dnajc30P59041 219 aa18.38■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Prrx1P63013 245 aa18.38■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Taar4Q5QD15 347 aa18.38■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Olfr1370Q8VFG4 316 aa18.38■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Olfr1099Q8VG37 312 aa18.38■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Sval2Q99N75 144 aa18.38■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Mrpl42Q9CPV3 142 aa18.38■□□□□ 0.53
Scn1b-201ENSMUST00000098548 Kcnk5Q9JK62 502 aa18.38■□□□□ 0.53
Retrieved 100 of 22,080 RNA–protein pairs in 31.9 ms