RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 IL7P13232 177 aa11.64□□□□□ -0.55
PHGDH-213ENST00000641272 TAS2R30P59541 319 aa11.64□□□□□ -0.55
PHGDH-213ENST00000641272 VAMP2P63027 116 aa11.64□□□□□ -0.55
PHGDH-213ENST00000641272 PXDC1Q5TGL8 231 aa11.64□□□□□ -0.55
PHGDH-213ENST00000641272 MIC13Q5XKP0 118 aa11.64□□□□□ -0.55
PHGDH-213ENST00000641272 MITD1Q8WV92 249 aa11.64□□□□□ -0.55
PHGDH-213ENST00000641272 KRTAP1-5Q9BYS1 174 aa11.64□□□□□ -0.55
PHGDH-213ENST00000641272 CST7O76096 145 aa11.63□□□□□ -0.55
PHGDH-213ENST00000641272 IGLC2P0DOY2 106 aa11.63□□□□□ -0.55
PHGDH-213ENST00000641272 HOXA5P20719 270 aa11.63□□□□□ -0.55
PHGDH-213ENST00000641272 BCAP31P51572 246 aa11.63□□□□□ -0.55
PHGDH-213ENST00000641272 CAV2P51636 162 aa11.63□□□□□ -0.55
PHGDH-213ENST00000641272 ZNF493Q6ZR52 646 aa11.63□□□□□ -0.55
PHGDH-213ENST00000641272 GNPNAT1Q96EK6 184 aaPredicted RBP11.63□□□□□ -0.55
PHGDH-213ENST00000641272 TRAV12-3A0A0B4J271 114 aa11.62□□□□□ -0.55
PHGDH-213ENST00000641272 UBE2L5PA0A1B0GUS4 154 aa11.62□□□□□ -0.55
PHGDH-213ENST00000641272 CAMLGP49069 296 aa11.62□□□□□ -0.55
PHGDH-213ENST00000641272 NRARPQ7Z6K4 114 aa11.62□□□□□ -0.55
PHGDH-213ENST00000641272 SEC22CQ9BRL7 303 aa11.62□□□□□ -0.55
PHGDH-213ENST00000641272 RNF24Q9Y225 148 aa11.62□□□□□ -0.55
PHGDH-213ENST00000641272 FAM24AA6NFZ4 105 aa11.61□□□□□ -0.55
PHGDH-213ENST00000641272 SNURFLB1AK76 121 aa11.61□□□□□ -0.55
PHGDH-213ENST00000641272 ZNF701M0R085 212 aaPredicted RBP11.61□□□□□ -0.55
PHGDH-213ENST00000641272 RLN2P04090 185 aa11.61□□□□□ -0.55
PHGDH-213ENST00000641272 ZNF846Q147U1 533 aa11.61□□□□□ -0.55
PHGDH-213ENST00000641272 CCDC28AQ8IWP9 274 aa11.61□□□□□ -0.55
PHGDH-213ENST00000641272 C20orf144Q9BQM9 153 aa11.61□□□□□ -0.55
PHGDH-213ENST00000641272 GGACTQ9BVM4 153 aa11.61□□□□□ -0.55
PHGDH-213ENST00000641272 TMPRSS5Q9H3S3 457 aa11.61□□□□□ -0.55
PHGDH-213ENST00000641272 PXMP4Q9Y6I8 212 aa11.61□□□□□ -0.55
PHGDH-213ENST00000641272 APOBP04114 4563 aaKnown RBP11.6□□□□□ -0.55
PHGDH-213ENST00000641272 TRAV6A0A075B6T7 132 aa11.6□□□□□ -0.55
PHGDH-213ENST00000641272 CT45A10P0DMU9 189 aa11.6□□□□□ -0.55
PHGDH-213ENST00000641272 M6PRP20645 277 aa11.6□□□□□ -0.55
PHGDH-213ENST00000641272 LEPP41159 167 aa11.6□□□□□ -0.55
PHGDH-213ENST00000641272 S100A10P60903 97 aa11.6□□□□□ -0.55
PHGDH-213ENST00000641272 LINC00612Q8N6U2 182 aa11.6□□□□□ -0.55
PHGDH-213ENST00000641272 SAT2Q96F10 170 aaPredicted RBP11.6□□□□□ -0.55
PHGDH-213ENST00000641272 UQCC1Q9NVA1 299 aa11.6□□□□□ -0.55
PHGDH-213ENST00000641272 C5orf51A6NDU8 294 aa11.59□□□□□ -0.55
PHGDH-213ENST00000641272 NPIPB6E9PJ23 425 aa11.59□□□□□ -0.55
PHGDH-213ENST00000641272 M0R3E3 92 aa11.59□□□□□ -0.55
PHGDH-213ENST00000641272 BAXQ07812 192 aa11.59□□□□□ -0.55
PHGDH-213ENST00000641272 Q6ZTI0 123 aa11.59□□□□□ -0.55
PHGDH-213ENST00000641272 MAPKAPK5-AS1Q8N8E1 139 aa11.59□□□□□ -0.55
PHGDH-213ENST00000641272 RXFP4Q8TDU9 374 aa11.59□□□□□ -0.55
PHGDH-213ENST00000641272 ZNF586Q9NXT0 402 aa11.59□□□□□ -0.55
PHGDH-213ENST00000641272 PLA2G10O15496 165 aa11.58□□□□□ -0.56
PHGDH-213ENST00000641272 LYRM1O43325 122 aa11.58□□□□□ -0.56
PHGDH-213ENST00000641272 ERCC8Q13216 396 aa11.58□□□□□ -0.56
PHGDH-213ENST00000641272 Q6ZRG5 221 aa11.58□□□□□ -0.56
PHGDH-213ENST00000641272 SPATA12Q7Z6I5 190 aa11.58□□□□□ -0.56
PHGDH-213ENST00000641272 C11orf1Q9H5F2 150 aa11.58□□□□□ -0.56
PHGDH-213ENST00000641272 Q9H8V8 135 aa11.58□□□□□ -0.56
PHGDH-213ENST00000641272 DNAJC4Q9NNZ3 241 aa11.58□□□□□ -0.56
PHGDH-213ENST00000641272 NUDT15Q9NV35 164 aa11.58□□□□□ -0.56
PHGDH-213ENST00000641272 WDR83OSQ9Y284 106 aa11.58□□□□□ -0.56
PHGDH-213ENST00000641272 IGSF23A1L1A6 192 aa11.57□□□□□ -0.56
PHGDH-213ENST00000641272 BTN1A1Q13410 526 aa11.57□□□□□ -0.56
PHGDH-213ENST00000641272 RAB31Q13636 194 aa11.57□□□□□ -0.56
PHGDH-213ENST00000641272 OR1L4Q8NGR5 311 aa11.57□□□□□ -0.56
PHGDH-213ENST00000641272 ZNF431Q8TF32 576 aaPredicted RBP11.57□□□□□ -0.56
PHGDH-213ENST00000641272 PYYP10082 97 aa11.56□□□□□ -0.56
PHGDH-213ENST00000641272 FGF7P21781 194 aa11.56□□□□□ -0.56
PHGDH-213ENST00000641272 ESRGQ1W209 222 aa11.56□□□□□ -0.56
PHGDH-213ENST00000641272 TTC32Q5I0X7 151 aa11.56□□□□□ -0.56
PHGDH-213ENST00000641272 ODF3Q96PU9 254 aa11.56□□□□□ -0.56
PHGDH-213ENST00000641272 PFDN5Q99471 154 aa11.56□□□□□ -0.56
PHGDH-213ENST00000641272 GSN-AS1Q9NRJ2 163 aa11.56□□□□□ -0.56
PHGDH-213ENST00000641272 SLC39A9Q9NUM3 307 aa11.56□□□□□ -0.56
PHGDH-213ENST00000641272 CDK2AP2O75956 126 aa11.55□□□□□ -0.56
PHGDH-213ENST00000641272 TCRBP04435 133 aa11.55□□□□□ -0.56
PHGDH-213ENST00000641272 RAB32Q13637 225 aa11.55□□□□□ -0.56
PHGDH-213ENST00000641272 GUK1Q16774 197 aa11.55□□□□□ -0.56
PHGDH-213ENST00000641272 GCSAMLQ5JQS6 135 aa11.55□□□□□ -0.56
PHGDH-213ENST00000641272 BLNKQ8WV28 456 aa11.55□□□□□ -0.56
PHGDH-213ENST00000641272 PYGO2Q9BRQ0 406 aa11.55□□□□□ -0.56
PHGDH-213ENST00000641272 Q9H3A6 140 aa11.55□□□□□ -0.56
PHGDH-213ENST00000641272 MRPS16Q9Y3D3 137 aaKnown RBP11.55□□□□□ -0.56
PHGDH-213ENST00000641272 DNAH5Q8TE73 4624 aa11.55□□□□□ -0.56
PHGDH-213ENST00000641272 TRBV19A0A075B6N1 114 aa11.54□□□□□ -0.56
PHGDH-213ENST00000641272 TRGV2A0A075B6R0 118 aa11.54□□□□□ -0.56
PHGDH-213ENST00000641272 IGKV2-40A0A087WW87 121 aaPredicted RBP11.54□□□□□ -0.56
PHGDH-213ENST00000641272 TRGV1A0A0A0MS02 117 aa11.54□□□□□ -0.56
PHGDH-213ENST00000641272 C7orf71A4D174 169 aa11.54□□□□□ -0.56
PHGDH-213ENST00000641272 IGKV2D-40P01614 121 aaPredicted RBP11.54□□□□□ -0.56
PHGDH-213ENST00000641272 PVALBP20472 110 aaPredicted RBP11.54□□□□□ -0.56
PHGDH-213ENST00000641272 SULT1A1P50225 295 aa11.54□□□□□ -0.56
PHGDH-213ENST00000641272 CD300CQ08708 224 aa11.54□□□□□ -0.56
PHGDH-213ENST00000641272 VWC2Q2TAL6 325 aa11.54□□□□□ -0.56
PHGDH-213ENST00000641272 EXOC3-AS1Q8N2X6 119 aa11.54□□□□□ -0.56
PHGDH-213ENST00000641272 C12orf45Q8N5I9 185 aaPredicted RBP11.54□□□□□ -0.56
PHGDH-213ENST00000641272 C11orf72Q8NBR9 251 aa11.54□□□□□ -0.56
PHGDH-213ENST00000641272 C2orf50Q96LR7 162 aa11.54□□□□□ -0.56
PHGDH-213ENST00000641272 GPN1Q9HCN4 374 aaPredicted RBP11.54□□□□□ -0.56
PHGDH-213ENST00000641272 LYRM2Q9NU23 88 aaPredicted RBP11.54□□□□□ -0.56
PHGDH-213ENST00000641272 NDUFB4O95168 129 aa11.53□□□□□ -0.56
PHGDH-213ENST00000641272 RPL29P47914 159 aaKnown RBP11.53□□□□□ -0.56
PHGDH-213ENST00000641272 KRTAP10-2P60368 255 aa11.53□□□□□ -0.56
PHGDH-213ENST00000641272 CNPY1Q3B7I2 92 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms