RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 CENPVL3A0A0U1RRI6 287 aa8.8□□□□□ -1
SCN1B-208ENST00000640135 DEFB130BP0DP73 79 aa8.8□□□□□ -1
SCN1B-208ENST00000640135 DEFB130AP0DP74 79 aa8.8□□□□□ -1
SCN1B-208ENST00000640135 IL17RELQ6ZVW7 336 aa8.8□□□□□ -1
SCN1B-208ENST00000640135 SSBP4Q9BWG4 385 aaPredicted RBP8.8□□□□□ -1
SCN1B-208ENST00000640135 CTSZQ9UBR2 303 aa8.8□□□□□ -1
SCN1B-208ENST00000640135 COLCA2A8K830 154 aa8.8□□□□□ -1
SCN1B-208ENST00000640135 A8MWV9 139 aa8.8□□□□□ -1
SCN1B-208ENST00000640135 Q86TA4 180 aa8.8□□□□□ -1
SCN1B-208ENST00000640135 LRRC75A-AS1Q8N1F1 130 aa8.8□□□□□ -1
SCN1B-208ENST00000640135 IFI27L1Q96BM0 104 aa8.8□□□□□ -1
SCN1B-208ENST00000640135 SLC25A2Q9BXI2 301 aa8.8□□□□□ -1
SCN1B-208ENST00000640135 CHTOPQ9Y3Y2 248 aaKnown RBP8.8□□□□□ -1
SCN1B-208ENST00000640135 IGHV7-4-1A0A0J9YVY3 117 aa8.8□□□□□ -1
SCN1B-208ENST00000640135 NDUFA3O95167 84 aa8.8□□□□□ -1
SCN1B-208ENST00000640135 TEX43Q6ZNM6 134 aa8.8□□□□□ -1
SCN1B-208ENST00000640135 Q8TAT8 98 aa8.8□□□□□ -1
SCN1B-208ENST00000640135 LGALS1P09382 135 aaKnown RBP8.8□□□□□ -1
SCN1B-208ENST00000640135 C11orf53Q8IXP5 236 aa8.8□□□□□ -1
SCN1B-208ENST00000640135 HEATR5AQ86XA9 2040 aa8.8□□□□□ -1
SCN1B-208ENST00000640135 MED13LQ71F56 2210 aa8.8□□□□□ -1
SCN1B-208ENST00000640135 TRBV19A0A075B6N1 114 aa8.79□□□□□ -1
SCN1B-208ENST00000640135 IGHV4-59P01825 116 aa8.79□□□□□ -1
SCN1B-208ENST00000640135 MLANAQ16655 118 aa8.79□□□□□ -1
SCN1B-208ENST00000640135 KRTAP27-1Q3LI81 207 aa8.79□□□□□ -1
SCN1B-208ENST00000640135 C9orf66Q5T8R8 295 aa8.79□□□□□ -1
SCN1B-208ENST00000640135 Q6ZSR3 168 aa8.79□□□□□ -1
SCN1B-208ENST00000640135 RASL10AQ92737 203 aa8.79□□□□□ -1
SCN1B-208ENST00000640135 C14orf144Q96I85 54 aa8.79□□□□□ -1
SCN1B-208ENST00000640135 RSPO3Q9BXY4 272 aaPredicted RBP8.79□□□□□ -1
SCN1B-208ENST00000640135 XCL2Q9UBD3 114 aa8.79□□□□□ -1
SCN1B-208ENST00000640135 CDKN1BP46527 198 aa8.79□□□□□ -1
SCN1B-208ENST00000640135 FXYD7P58549 80 aa8.79□□□□□ -1
SCN1B-208ENST00000640135 TRPT1Q86TN4 253 aaKnown RBP8.79□□□□□ -1
SCN1B-208ENST00000640135 NDUFAF3Q9BU61 184 aa8.79□□□□□ -1
SCN1B-208ENST00000640135 ZNF492Q9P255 531 aa8.79□□□□□ -1
SCN1B-208ENST00000640135 PGPEP1LA6NFU8 196 aa8.79□□□□□ -1
SCN1B-208ENST00000640135 ERCC8Q13216 396 aa8.79□□□□□ -1
SCN1B-208ENST00000640135 PLEKHB2Q96CS7 222 aa8.79□□□□□ -1
SCN1B-208ENST00000640135 MMP23AO75900 390 aa8.79□□□□□ -1
SCN1B-208ENST00000640135 SERF1AO75920 110 aa8.79□□□□□ -1
SCN1B-208ENST00000640135 PFN1P07737 140 aaKnown RBP8.79□□□□□ -1
SCN1B-208ENST00000640135 SS18Q15532 418 aa8.79□□□□□ -1
SCN1B-208ENST00000640135 HELZP42694 1942 aaKnown RBP8.78□□□□□ -1
SCN1B-208ENST00000640135 IGHV1OR15-1A0A075B7D0 117 aa8.78□□□□□ -1
SCN1B-208ENST00000640135 WT1-ASQ06250 92 aa8.78□□□□□ -1
SCN1B-208ENST00000640135 SPXQ9BT56 116 aa8.78□□□□□ -1
SCN1B-208ENST00000640135 LIME1Q9H400 295 aa8.78□□□□□ -1
SCN1B-208ENST00000640135 IGHV3-53P01767 116 aa8.78□□□□□ -1
SCN1B-208ENST00000640135 SRSF2Q01130 221 aaKnown RBP8.78□□□□□ -1
SCN1B-208ENST00000640135 CT83Q5H943 113 aa8.78□□□□□ -1
SCN1B-208ENST00000640135 MRPL16Q9NX20 251 aaKnown RBP8.78□□□□□ -1
SCN1B-208ENST00000640135 CA1P00915 261 aaPredicted RBP8.78□□□□□ -1
SCN1B-208ENST00000640135 SCGB1A1P11684 91 aa8.78□□□□□ -1
SCN1B-208ENST00000640135 ZNF134P52741 427 aa8.78□□□□□ -1
SCN1B-208ENST00000640135 C8orf86Q6ZUL3 223 aa8.78□□□□□ -1
SCN1B-208ENST00000640135 ATOH7Q8N100 152 aa8.78□□□□□ -1
SCN1B-208ENST00000640135 Q8NA96 180 aa8.78□□□□□ -1
SCN1B-208ENST00000640135 RMI2Q96E14 147 aa8.78□□□□□ -1
SCN1B-208ENST00000640135 MS4A6AQ9H2W1 248 aa8.78□□□□□ -1
SCN1B-208ENST00000640135 H3BRN7 92 aa8.78□□□□□ -1
SCN1B-208ENST00000640135 CCL24O00175 119 aa8.78□□□□□ -1
SCN1B-208ENST00000640135 ARMS2P0C7Q2 107 aa8.78□□□□□ -1
SCN1B-208ENST00000640135 ADMP35318 185 aa8.78□□□□□ -1
SCN1B-208ENST00000640135 THAP8Q8NA92 274 aa8.78□□□□□ -1
SCN1B-208ENST00000640135 F5H768 121 aa8.77□□□□□ -1.01
SCN1B-208ENST00000640135 GZMBP10144 247 aa8.77□□□□□ -1.01
SCN1B-208ENST00000640135 EVI2AP22794 236 aa8.77□□□□□ -1.01
SCN1B-208ENST00000640135 TRAV9-2A0A087WT02 112 aa8.77□□□□□ -1.01
SCN1B-208ENST00000640135 TEX48A0A1B0GUV7 120 aa8.77□□□□□ -1.01
SCN1B-208ENST00000640135 IGKCP01834 107 aa8.77□□□□□ -1.01
SCN1B-208ENST00000640135 SEM1Q6ZVN7 128 aa8.77□□□□□ -1.01
SCN1B-208ENST00000640135 NIT1Q86X76 327 aa8.77□□□□□ -1.01
SCN1B-208ENST00000640135 FAM19A2Q8N3H0 131 aa8.77□□□□□ -1.01
SCN1B-208ENST00000640135 C14orf178Q8N769 122 aaPredicted RBP8.77□□□□□ -1.01
SCN1B-208ENST00000640135 TMEM89A2RUT3 159 aa8.77□□□□□ -1.01
SCN1B-208ENST00000640135 D6R8Y8 96 aa8.77□□□□□ -1.01
SCN1B-208ENST00000640135 IGLC1P0CG04 106 aa8.77□□□□□ -1.01
SCN1B-208ENST00000640135 NPBQ8NG41 125 aa8.77□□□□□ -1.01
SCN1B-208ENST00000640135 TMEM158Q8WZ71 300 aa8.77□□□□□ -1.01
SCN1B-208ENST00000640135 OTOGLQ3ZCN5 2332 aa8.76□□□□□ -1.01
SCN1B-208ENST00000640135 EREGO14944 169 aa8.76□□□□□ -1.01
SCN1B-208ENST00000640135 SELENOKQ9Y6D0 94 aa8.76□□□□□ -1.01
SCN1B-208ENST00000640135 TRAV8-1A0A0A6YYK1 113 aa8.76□□□□□ -1.01
SCN1B-208ENST00000640135 SPINK13Q1W4C9 94 aa8.76□□□□□ -1.01
SCN1B-208ENST00000640135 SPAG8Q99932 426 aaPredicted RBP8.76□□□□□ -1.01
SCN1B-208ENST00000640135 IGHV3-73A0A0B4J1V6 119 aa8.76□□□□□ -1.01
SCN1B-208ENST00000640135 LOXL1Q08397 574 aaPredicted RBP8.76□□□□□ -1.01
SCN1B-208ENST00000640135 FOXI2Q6ZQN5 318 aa8.76□□□□□ -1.01
SCN1B-208ENST00000640135 TMEM256Q8N2U0 113 aa8.76□□□□□ -1.01
SCN1B-208ENST00000640135 TMEM238C9JI98 176 aa8.75□□□□□ -1.01
SCN1B-208ENST00000640135 FAM120AOSQ5T036 256 aa8.75□□□□□ -1.01
SCN1B-208ENST00000640135 IGFL4Q6B9Z1 124 aa8.75□□□□□ -1.01
SCN1B-208ENST00000640135 MRPL53Q96EL3 112 aaKnown RBP8.75□□□□□ -1.01
SCN1B-208ENST00000640135 CSTL1Q9H114 145 aa8.75□□□□□ -1.01
SCN1B-208ENST00000640135 C2orf16Q68DN1 1984 aa8.75□□□□□ -1.01
SCN1B-208ENST00000640135 IGKV3D-20A0A0C4DH25 116 aa8.75□□□□□ -1.01
SCN1B-208ENST00000640135 LINC00158P58513 81 aa8.75□□□□□ -1.01
SCN1B-208ENST00000640135 HAPLN4Q86UW8 402 aa8.75□□□□□ -1.01
SCN1B-208ENST00000640135 LENEPQ9Y5L5 61 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms