RNA–Protein interactions for RNA: ENST00000640039.1

SPIN3-233, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 1,067 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-233	ENST00000640039	RPL7L1	Q6DKI1	246 aa	Known RBP	11.5	□□□□□ -0.57
SPIN3-233	ENST00000640039	FAM122C	Q6P4D5	195 aa		11.5	□□□□□ -0.57
SPIN3-233	ENST00000640039	AMTN	Q6UX39	209 aa		11.5	□□□□□ -0.57
SPIN3-233	ENST00000640039	OR10G4	Q8NGN3	311 aa		11.5	□□□□□ -0.57
SPIN3-233	ENST00000640039	OR10G9	Q8NGN4	311 aa		11.5	□□□□□ -0.57
SPIN3-233	ENST00000640039	OR10G7	Q8NGN6	311 aa		11.5	□□□□□ -0.57
SPIN3-233	ENST00000640039	OR2G3	Q8NGZ4	309 aa		11.5	□□□□□ -0.57
SPIN3-233	ENST00000640039	GNPNAT1	Q96EK6	184 aa	Predicted RBP	11.5	□□□□□ -0.57
SPIN3-233	ENST00000640039	MRPL53	Q96EL3	112 aa	Known RBP	11.5	□□□□□ -0.57
SPIN3-233	ENST00000640039	DYNC2H1	Q8NCM8	4307 aa	Known RBP	11.5	□□□□□ -0.57
SPIN3-233	ENST00000640039	DEFB4A	O15263	64 aa		11.49	□□□□□ -0.57
SPIN3-233	ENST00000640039	JTB	O76095	146 aa		11.49	□□□□□ -0.57
SPIN3-233	ENST00000640039	NDUFB4	O95168	129 aa		11.49	□□□□□ -0.57
SPIN3-233	ENST00000640039		Q8NAQ8	132 aa		11.49	□□□□□ -0.57
SPIN3-233	ENST00000640039	FXYD5	Q96DB9	178 aa		11.49	□□□□□ -0.57
SPIN3-233	ENST00000640039		X6R8D5	127 aa		11.49	□□□□□ -0.57
SPIN3-233	ENST00000640039	IGHV4-28	A0A0C4DH34	117 aa		11.48	□□□□□ -0.57
SPIN3-233	ENST00000640039		M0R2Z0	102 aa		11.48	□□□□□ -0.57
SPIN3-233	ENST00000640039	INS	P01308	110 aa		11.48	□□□□□ -0.57
SPIN3-233	ENST00000640039	CDC34	P49427	236 aa	Predicted RBP	11.48	□□□□□ -0.57
SPIN3-233	ENST00000640039	ICAM4	Q14773	271 aa		11.48	□□□□□ -0.57
SPIN3-233	ENST00000640039	PQLC2	Q6ZP29	291 aa		11.48	□□□□□ -0.57
SPIN3-233	ENST00000640039	EXOC3-AS1	Q8N2X6	119 aa		11.48	□□□□□ -0.57
SPIN3-233	ENST00000640039	IGF2BP2-AS1	Q96M15	143 aa		11.48	□□□□□ -0.57
SPIN3-233	ENST00000640039	TMEM208	Q9BTX3	173 aa		11.48	□□□□□ -0.57
SPIN3-233	ENST00000640039	SH3BGRL3	Q9H299	93 aa		11.48	□□□□□ -0.57
SPIN3-233	ENST00000640039	RYR2	Q92736	4967 aa		11.47	□□□□□ -0.57
SPIN3-233	ENST00000640039	CXorf65	A6NEN9	183 aa		11.47	□□□□□ -0.57
SPIN3-233	ENST00000640039	HMSD	A8MTL9	139 aa		11.47	□□□□□ -0.57
SPIN3-233	ENST00000640039	PRAC2	D3DTV9	90 aa		11.47	□□□□□ -0.57
SPIN3-233	ENST00000640039		M0R3E3	92 aa		11.47	□□□□□ -0.57
SPIN3-233	ENST00000640039	PMS2P11	Q13670	270 aa		11.47	□□□□□ -0.57
SPIN3-233	ENST00000640039	ZNF345	Q14585	488 aa		11.47	□□□□□ -0.57
SPIN3-233	ENST00000640039	ZNF705A	Q6ZN79	300 aa	Predicted RBP	11.47	□□□□□ -0.57
SPIN3-233	ENST00000640039	SMIM9	A6NGZ8	99 aa		11.46	□□□□□ -0.57
SPIN3-233	ENST00000640039	TSPO	P30536	169 aa		11.46	□□□□□ -0.57
SPIN3-233	ENST00000640039	CDKN1B	P46527	198 aa		11.46	□□□□□ -0.57
SPIN3-233	ENST00000640039	CSN1S1	P47710	185 aa		11.46	□□□□□ -0.57
SPIN3-233	ENST00000640039		Q6ZNX1	250 aa		11.46	□□□□□ -0.57
SPIN3-233	ENST00000640039	BAP18	Q8IXM2	172 aa		11.46	□□□□□ -0.57
SPIN3-233	ENST00000640039	LYPD1	Q8N2G4	141 aa		11.46	□□□□□ -0.57
SPIN3-233	ENST00000640039	C11orf45	Q8TAV5	145 aa		11.46	□□□□□ -0.57
SPIN3-233	ENST00000640039	ZNF503	Q96F45	646 aa		11.46	□□□□□ -0.57
SPIN3-233	ENST00000640039	PHYHIPL	Q96FC7	376 aa		11.46	□□□□□ -0.57
SPIN3-233	ENST00000640039	NEU1	Q99519	415 aa		11.46	□□□□□ -0.57
SPIN3-233	ENST00000640039	ARPC5L	Q9BPX5	153 aa		11.46	□□□□□ -0.57
SPIN3-233	ENST00000640039	TRAV12-2	A0A075B6T6	113 aa		11.45	□□□□□ -0.58
SPIN3-233	ENST00000640039		A0A0D9SG52	128 aa		11.45	□□□□□ -0.58
SPIN3-233	ENST00000640039	HMGB3	O15347	200 aa	Known RBP	11.45	□□□□□ -0.58
SPIN3-233	ENST00000640039	EIF3G	O75821	320 aa	Known RBP eCLIP	11.45	□□□□□ -0.58
SPIN3-233	ENST00000640039	HBE1	P02100	147 aa		11.45	□□□□□ -0.58
SPIN3-233	ENST00000640039	RBMY1A1	P0DJD3	496 aa	Known RBP	11.45	□□□□□ -0.58
SPIN3-233	ENST00000640039	RBMY1C	P0DJD4	496 aa		11.45	□□□□□ -0.58
SPIN3-233	ENST00000640039	RAN	P62826	216 aa	Known RBP	11.45	□□□□□ -0.58
SPIN3-233	ENST00000640039	RBMY1F	Q15415	496 aa	Known RBP	11.45	□□□□□ -0.58
SPIN3-233	ENST00000640039	KCNRG	Q8N5I3	272 aa		11.45	□□□□□ -0.58
SPIN3-233	ENST00000640039	RPP25L	Q8N5L8	163 aa	Known RBP	11.45	□□□□□ -0.58
SPIN3-233	ENST00000640039	ACTR3C	Q9C0K3	210 aa	Predicted RBP	11.45	□□□□□ -0.58
SPIN3-233	ENST00000640039		Q9H3A6	140 aa		11.45	□□□□□ -0.58
SPIN3-233	ENST00000640039	KANTR	A0A1W2PQU2	76 aa		11.44	□□□□□ -0.58
SPIN3-233	ENST00000640039	NPIPB6	E9PJ23	425 aa		11.44	□□□□□ -0.58
SPIN3-233	ENST00000640039	ARL14EPL	P0DKL9	152 aa		11.44	□□□□□ -0.58
SPIN3-233	ENST00000640039	RRN3P1	Q2M238	152 aa		11.44	□□□□□ -0.58
SPIN3-233	ENST00000640039	FAM74A1	Q5RGS3	127 aa		11.44	□□□□□ -0.58
SPIN3-233	ENST00000640039	AKR1C8P	Q5T2L2	129 aa		11.44	□□□□□ -0.58
SPIN3-233	ENST00000640039	C1orf158	Q8N1D5	194 aa		11.44	□□□□□ -0.58
SPIN3-233	ENST00000640039	OR11H4	Q8NGC9	324 aa		11.44	□□□□□ -0.58
SPIN3-233	ENST00000640039	RAB24	Q969Q5	203 aa		11.44	□□□□□ -0.58
SPIN3-233	ENST00000640039	TMEM189	A5PLL7	270 aa		11.43	□□□□□ -0.58
SPIN3-233	ENST00000640039	NUPR2	A6NF83	97 aa		11.43	□□□□□ -0.58
SPIN3-233	ENST00000640039	CRX	O43186	299 aa	Predicted RBP	11.43	□□□□□ -0.58
SPIN3-233	ENST00000640039	STAG3L2	P0CL84	134 aa		11.43	□□□□□ -0.58
SPIN3-233	ENST00000640039	STAG3L3	P0CL85	134 aa		11.43	□□□□□ -0.58
SPIN3-233	ENST00000640039	LEP	P41159	167 aa		11.43	□□□□□ -0.58
SPIN3-233	ENST00000640039	TMEM256	Q8N2U0	113 aa		11.43	□□□□□ -0.58
SPIN3-233	ENST00000640039	LINC00477	Q96M19	166 aa		11.43	□□□□□ -0.58
SPIN3-233	ENST00000640039	ODF3	Q96PU9	254 aa		11.43	□□□□□ -0.58
SPIN3-233	ENST00000640039	hCG_2014768	A0A024R1R8	64 aa		11.42	□□□□□ -0.58
SPIN3-233	ENST00000640039	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	11.42	□□□□□ -0.58
SPIN3-233	ENST00000640039	PFDN1	O60925	122 aa		11.42	□□□□□ -0.58
SPIN3-233	ENST00000640039	IGKV2D-40	P01614	121 aa	Predicted RBP	11.42	□□□□□ -0.58
SPIN3-233	ENST00000640039	CT45A10	P0DMU9	189 aa		11.42	□□□□□ -0.58
SPIN3-233	ENST00000640039	NANOS2	P60321	138 aa	Known RBP	11.42	□□□□□ -0.58
SPIN3-233	ENST00000640039	ERCC8	Q13216	396 aa		11.42	□□□□□ -0.58
SPIN3-233	ENST00000640039	TMEM78	Q5T7P6	136 aa		11.42	□□□□□ -0.58
SPIN3-233	ENST00000640039	CMTM2	Q8TAZ6	248 aa		11.42	□□□□□ -0.58
SPIN3-233	ENST00000640039	ST6GAL2	Q96JF0	529 aa		11.42	□□□□□ -0.58
SPIN3-233	ENST00000640039	CYTL1	Q9NRR1	136 aa		11.42	□□□□□ -0.58
SPIN3-233	ENST00000640039	LOC102723971	A0A1B0GUV8	181 aa		11.41	□□□□□ -0.58
SPIN3-233	ENST00000640039	BCL2L11	O43521	198 aa		11.41	□□□□□ -0.58
SPIN3-233	ENST00000640039	CXorf1	O96002	111 aa		11.41	□□□□□ -0.58
SPIN3-233	ENST00000640039	EMP1	P54849	157 aa		11.41	□□□□□ -0.58
SPIN3-233	ENST00000640039	IQCF2	Q8IXL9	164 aa		11.41	□□□□□ -0.58
SPIN3-233	ENST00000640039	TCTE3	Q8IZS6	198 aa		11.41	□□□□□ -0.58
SPIN3-233	ENST00000640039	RXFP4	Q8TDU9	374 aa		11.41	□□□□□ -0.58
SPIN3-233	ENST00000640039	HYLS1	Q96M11	299 aa		11.41	□□□□□ -0.58
SPIN3-233	ENST00000640039	LINC01587	Q99440	93 aa		11.41	□□□□□ -0.58
SPIN3-233	ENST00000640039	C20orf144	Q9BQM9	153 aa		11.41	□□□□□ -0.58
SPIN3-233	ENST00000640039	ZNF471	Q9BX82	626 aa	Predicted RBP	11.41	□□□□□ -0.58
SPIN3-233	ENST00000640039	OTOR	Q9NRC9	128 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms