RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 SRIP30626 198 aa5.1□□□□□ -1.59
NECAP1-220ENST00000639841 NMUP48645 174 aa5.1□□□□□ -1.59
NECAP1-220ENST00000639841 PIGPP57054 158 aa5.1□□□□□ -1.59
NECAP1-220ENST00000639841 HRCT1Q6UXD1 115 aa5.1□□□□□ -1.59
NECAP1-220ENST00000639841 LINC01006Q8NI28 216 aa5.1□□□□□ -1.59
NECAP1-220ENST00000639841 C10orf82Q8WW14 230 aa5.1□□□□□ -1.59
NECAP1-220ENST00000639841 MAL2Q969L2 176 aa5.1□□□□□ -1.59
NECAP1-220ENST00000639841 ADAT3Q96EY9 351 aaPredicted RBP5.1□□□□□ -1.59
NECAP1-220ENST00000639841 PHYHIPLQ96FC7 376 aa5.1□□□□□ -1.59
NECAP1-220ENST00000639841 ZNF414Q96IQ9 312 aa5.1□□□□□ -1.59
NECAP1-220ENST00000639841 KCNIP2Q9NS61 270 aa5.1□□□□□ -1.59
NECAP1-220ENST00000639841 SPANXCQ9NY87 97 aa5.1□□□□□ -1.59
NECAP1-220ENST00000639841 RBM7Q9Y580 266 aaKnown RBP5.1□□□□□ -1.59
NECAP1-220ENST00000639841 TRAV38-1A0A0B4J264 116 aa5.09□□□□□ -1.59
NECAP1-220ENST00000639841 IGHV3-11P01762 117 aa5.09□□□□□ -1.59
NECAP1-220ENST00000639841 MPV17P39210 176 aa5.09□□□□□ -1.59
NECAP1-220ENST00000639841 GABRA2P47869 451 aa5.09□□□□□ -1.59
NECAP1-220ENST00000639841 FGF12P61328 243 aa5.09□□□□□ -1.59
NECAP1-220ENST00000639841 PSG7Q13046 419 aa5.09□□□□□ -1.59
NECAP1-220ENST00000639841 GPR84Q9NQS5 396 aa5.09□□□□□ -1.59
NECAP1-220ENST00000639841 MRPS16Q9Y3D3 137 aaKnown RBP5.09□□□□□ -1.59
NECAP1-220ENST00000639841 VWFP04275 2813 aa5.09□□□□□ -1.59
NECAP1-220ENST00000639841 TRBV19A0A075B6N1 114 aa5.09□□□□□ -1.6
NECAP1-220ENST00000639841 MEIKINA0A087WXM9 373 aa5.09□□□□□ -1.6
NECAP1-220ENST00000639841 C9orf170A2RU37 121 aa5.09□□□□□ -1.6
NECAP1-220ENST00000639841 IQCF6A8MYZ5 107 aa5.09□□□□□ -1.6
NECAP1-220ENST00000639841 C9JQL5 133 aa5.09□□□□□ -1.6
NECAP1-220ENST00000639841 GSTZ1O43708 216 aaPredicted RBP5.09□□□□□ -1.6
NECAP1-220ENST00000639841 TSPAN19P0C672 248 aa5.09□□□□□ -1.6
NECAP1-220ENST00000639841 ZNF823P16415 610 aa5.09□□□□□ -1.6
NECAP1-220ENST00000639841 CMC4P56277 68 aaPredicted RBP5.09□□□□□ -1.6
NECAP1-220ENST00000639841 Q6ZS49 121 aa5.09□□□□□ -1.6
NECAP1-220ENST00000639841 ZNF101Q8IZC7 436 aa5.09□□□□□ -1.6
NECAP1-220ENST00000639841 SLC7A6Q92536 515 aa5.09□□□□□ -1.6
NECAP1-220ENST00000639841 COMMD5Q9GZQ3 224 aa5.09□□□□□ -1.6
NECAP1-220ENST00000639841 COA4Q9NYJ1 87 aa5.09□□□□□ -1.6
NECAP1-220ENST00000639841 MED31Q9Y3C7 131 aa5.09□□□□□ -1.6
NECAP1-220ENST00000639841 IGKV1-12A0A0C4DH73 117 aa5.08□□□□□ -1.6
NECAP1-220ENST00000639841 IGKV1D-12P01611 117 aa5.08□□□□□ -1.6
NECAP1-220ENST00000639841 P0C879 139 aa5.08□□□□□ -1.6
NECAP1-220ENST00000639841 RAB13P51153 203 aa5.08□□□□□ -1.6
NECAP1-220ENST00000639841 HOXC5Q00444 222 aa5.08□□□□□ -1.6
NECAP1-220ENST00000639841 RPL18Q07020 188 aaKnown RBP5.08□□□□□ -1.6
NECAP1-220ENST00000639841 MMDQ15546 238 aa5.08□□□□□ -1.6
NECAP1-220ENST00000639841 GRK1Q15835 563 aa5.08□□□□□ -1.6
NECAP1-220ENST00000639841 Q6Q795 121 aa5.08□□□□□ -1.6
NECAP1-220ENST00000639841 WDR86Q86TI4 376 aa5.08□□□□□ -1.6
NECAP1-220ENST00000639841 RTN4IP1Q8WWV3 396 aaPredicted RBP5.08□□□□□ -1.6
NECAP1-220ENST00000639841 TEX37Q96LM6 180 aa5.08□□□□□ -1.6
NECAP1-220ENST00000639841 TRAPPC2LQ9UL33 140 aa5.08□□□□□ -1.6
NECAP1-220ENST00000639841 NOTCH1P46531 2555 aa5.08□□□□□ -1.6
NECAP1-220ENST00000639841 IGHV3-66A0A0C4DH42 116 aa5.07□□□□□ -1.6
NECAP1-220ENST00000639841 DUXBA0A1W2PPF3 345 aa5.07□□□□□ -1.6
NECAP1-220ENST00000639841 KRTAP9-7A8MTY7 169 aa5.07□□□□□ -1.6
NECAP1-220ENST00000639841 CMBLQ96DG6 245 aa5.07□□□□□ -1.6
NECAP1-220ENST00000639841 KAAG1Q9UBP8 84 aa5.07□□□□□ -1.6
NECAP1-220ENST00000639841 H7BYZ3 331 aa5.07□□□□□ -1.6
NECAP1-220ENST00000639841 CXorf1O96002 111 aa5.07□□□□□ -1.6
NECAP1-220ENST00000639841 ZNF25P17030 456 aaPredicted RBP5.07□□□□□ -1.6
NECAP1-220ENST00000639841 OPRK1P41145 380 aa5.07□□□□□ -1.6
NECAP1-220ENST00000639841 HIST1H1AQ02539 215 aaPredicted RBP5.07□□□□□ -1.6
NECAP1-220ENST00000639841 RNASE13Q5GAN3 156 aaKnown RBP5.07□□□□□ -1.6
NECAP1-220ENST00000639841 PRSS54Q6PEW0 395 aa5.07□□□□□ -1.6
NECAP1-220ENST00000639841 NDUFA11Q86Y39 141 aa5.07□□□□□ -1.6
NECAP1-220ENST00000639841 NUP35Q8NFH5 326 aa5.07□□□□□ -1.6
NECAP1-220ENST00000639841 ZNRD1Q9P1U0 126 aa5.07□□□□□ -1.6
NECAP1-220ENST00000639841 A0A087WUU8 490 aa5.06□□□□□ -1.6
NECAP1-220ENST00000639841 A0A1B0GW64 132 aa5.06□□□□□ -1.6
NECAP1-220ENST00000639841 CPSF4LA6NMK7 179 aaKnown RBP5.06□□□□□ -1.6
NECAP1-220ENST00000639841 H0YJW9 148 aa5.06□□□□□ -1.6
NECAP1-220ENST00000639841 CDS2O95674 445 aa5.06□□□□□ -1.6
NECAP1-220ENST00000639841 CFC1P0CG37 223 aa5.06□□□□□ -1.6
NECAP1-220ENST00000639841 T-ENOLP0DO92 83 aa5.06□□□□□ -1.6
NECAP1-220ENST00000639841 MUC1P15941 1255 aaPredicted RBP5.06□□□□□ -1.6
NECAP1-220ENST00000639841 NPY1RP25929 384 aa5.06□□□□□ -1.6
NECAP1-220ENST00000639841 PSG9Q00887 426 aa5.06□□□□□ -1.6
NECAP1-220ENST00000639841 MORN2Q502X0 79 aa5.06□□□□□ -1.6
NECAP1-220ENST00000639841 BRD3OSQ6XYD6 125 aa5.06□□□□□ -1.6
NECAP1-220ENST00000639841 Q8N7P7 452 aa5.06□□□□□ -1.6
NECAP1-220ENST00000639841 TMEM229BQ8NBD8 167 aa5.06□□□□□ -1.6
NECAP1-220ENST00000639841 SUMF2Q8NBJ7 301 aa5.06□□□□□ -1.6
NECAP1-220ENST00000639841 OR4A5Q8NH83 315 aa5.06□□□□□ -1.6
NECAP1-220ENST00000639841 RAB2BQ8WUD1 216 aa5.06□□□□□ -1.6
NECAP1-220ENST00000639841 WDR61Q9GZS3 305 aaKnown RBP5.06□□□□□ -1.6
NECAP1-220ENST00000639841 M0R1W7 72 aa5.05□□□□□ -1.6
NECAP1-220ENST00000639841 TPST1O60507 370 aa5.05□□□□□ -1.6
NECAP1-220ENST00000639841 LPAR6P43657 344 aa5.05□□□□□ -1.6
NECAP1-220ENST00000639841 KRTAP10-2P60368 255 aa5.05□□□□□ -1.6
NECAP1-220ENST00000639841 RPS11P62280 158 aaKnown RBP eCLIP5.05□□□□□ -1.6
NECAP1-220ENST00000639841 MORN3Q6PF18 240 aaPredicted RBP5.05□□□□□ -1.6
NECAP1-220ENST00000639841 Q6ZR03 302 aa5.05□□□□□ -1.6
NECAP1-220ENST00000639841 OR5A1Q8NGJ0 315 aa5.05□□□□□ -1.6
NECAP1-220ENST00000639841 TM2D3Q9BRN9 247 aa5.05□□□□□ -1.6
NECAP1-220ENST00000639841 TRRAPQ9Y4A5 3859 aa5.05□□□□□ -1.6
NECAP1-220ENST00000639841 DOCK11Q5JSL3 2073 aa5.05□□□□□ -1.6
NECAP1-220ENST00000639841 IGLV1-50A0A075B6I6 118 aa5.05□□□□□ -1.6
NECAP1-220ENST00000639841 MDFIC2A0A1B0GVS7 189 aa5.05□□□□□ -1.6
NECAP1-220ENST00000639841 A0A1B0GVX0 72 aa5.05□□□□□ -1.6
NECAP1-220ENST00000639841 C9JAW5 83 aa5.05□□□□□ -1.6
NECAP1-220ENST00000639841 IFNA7P01567 189 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms