RNA–Protein interactions for RNA: ENST00000639534.1

CHD1L-211, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5 BASIC

Gene CHD1L, Length 1,144 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-211ENST00000639534 Q6ZS46 218 aa11.15□□□□□ -0.62
CHD1L-211ENST00000639534 PRR25Q96S07 402 aa11.15□□□□□ -0.62
CHD1L-211ENST00000639534 KLK15Q9H2R5 256 aa11.15□□□□□ -0.62
CHD1L-211ENST00000639534 A0A1B0GXF2 115 aa11.14□□□□□ -0.63
CHD1L-211ENST00000639534 SPINK4O60575 86 aa11.14□□□□□ -0.63
CHD1L-211ENST00000639534 FABP4P15090 132 aa11.14□□□□□ -0.63
CHD1L-211ENST00000639534 HBBP68871 147 aa11.14□□□□□ -0.63
CHD1L-211ENST00000639534 SRSF2Q01130 221 aaKnown RBP11.14□□□□□ -0.63
CHD1L-211ENST00000639534 OR10J3Q5JRS4 329 aa11.14□□□□□ -0.63
CHD1L-211ENST00000639534 FAM162BQ5T6X4 162 aa11.14□□□□□ -0.63
CHD1L-211ENST00000639534 GFI1BQ5VTD9 330 aa11.14□□□□□ -0.63
CHD1L-211ENST00000639534 SAMD13Q5VXD3 122 aa11.14□□□□□ -0.63
CHD1L-211ENST00000639534 OR10D4PQ8NGN7 298 aa11.14□□□□□ -0.63
CHD1L-211ENST00000639534 PACRGQ96M98 296 aaPredicted RBP11.14□□□□□ -0.63
CHD1L-211ENST00000639534 HIST1H2BLQ99880 126 aa11.14□□□□□ -0.63
CHD1L-211ENST00000639534 AKAP6Q13023 2319 aa11.14□□□□□ -0.63
CHD1L-211ENST00000639534 ZFYVE26Q68DK2 2539 aa11.13□□□□□ -0.63
CHD1L-211ENST00000639534 IGKV2-40A0A087WW87 121 aaPredicted RBP11.13□□□□□ -0.63
CHD1L-211ENST00000639534 HOXA3O43365 443 aaPredicted RBP11.13□□□□□ -0.63
CHD1L-211ENST00000639534 IGKV2D-40P01614 121 aaPredicted RBP11.13□□□□□ -0.63
CHD1L-211ENST00000639534 IGHV3-11P01762 117 aa11.13□□□□□ -0.63
CHD1L-211ENST00000639534 APOHP02749 345 aaPredicted RBP11.13□□□□□ -0.63
CHD1L-211ENST00000639534 ESDP10768 282 aa11.13□□□□□ -0.63
CHD1L-211ENST00000639534 C8orf86Q6ZUL3 223 aa11.13□□□□□ -0.63
CHD1L-211ENST00000639534 GPHB5Q86YW7 130 aa11.13□□□□□ -0.63
CHD1L-211ENST00000639534 BORCS7Q96B45 105 aa11.13□□□□□ -0.63
CHD1L-211ENST00000639534 UFC1Q9Y3C8 167 aa11.13□□□□□ -0.63
CHD1L-211ENST00000639534 ZNF207O43670 478 aaKnown RBP11.12□□□□□ -0.63
CHD1L-211ENST00000639534 TRBV12-3P01733 135 aa11.12□□□□□ -0.63
CHD1L-211ENST00000639534 PAFAH1B2P68402 229 aa11.12□□□□□ -0.63
CHD1L-211ENST00000639534 S100A12P80511 92 aa11.12□□□□□ -0.63
CHD1L-211ENST00000639534 RIGQ13278 110 aa11.12□□□□□ -0.63
CHD1L-211ENST00000639534 PDZD11Q5EBL8 140 aa11.12□□□□□ -0.63
CHD1L-211ENST00000639534 TCF24Q7RTU0 167 aa11.12□□□□□ -0.63
CHD1L-211ENST00000639534 Q8N2B8 174 aa11.12□□□□□ -0.63
CHD1L-211ENST00000639534 C16orf92Q96LL3 132 aa11.12□□□□□ -0.63
CHD1L-211ENST00000639534 FOXC2Q99958 501 aa11.12□□□□□ -0.63
CHD1L-211ENST00000639534 ZNF702PQ9H963 129 aa11.12□□□□□ -0.63
CHD1L-211ENST00000639534 DAZ1Q9NQZ3 744 aaKnown RBP11.12□□□□□ -0.63
CHD1L-211ENST00000639534 PPP1R14DQ9NXH3 145 aa11.12□□□□□ -0.63
CHD1L-211ENST00000639534 COL12A1Q99715 3063 aa11.11□□□□□ -0.63
CHD1L-211ENST00000639534 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.11□□□□□ -0.635e-13■■■■■ 29.8
CHD1L-211ENST00000639534 IGHV3-66A0A0C4DH42 116 aa11.11□□□□□ -0.63
CHD1L-211ENST00000639534 IGHV7-4-1A0A0J9YVY3 117 aa11.11□□□□□ -0.63
CHD1L-211ENST00000639534 TMEM189A5PLL7 270 aa11.11□□□□□ -0.63
CHD1L-211ENST00000639534 A8MWP6 167 aa11.11□□□□□ -0.63
CHD1L-211ENST00000639534 HAX1O00165 279 aa11.11□□□□□ -0.63
CHD1L-211ENST00000639534 AMBPP02760 352 aa11.11□□□□□ -0.63
CHD1L-211ENST00000639534 TMEM78Q5T7P6 136 aa11.11□□□□□ -0.63
CHD1L-211ENST00000639534 UNQ9165/PRO28630Q6UXU0 137 aa11.11□□□□□ -0.63
CHD1L-211ENST00000639534 BAGE3Q86Y29 109 aa11.11□□□□□ -0.63
CHD1L-211ENST00000639534 GTSF1Q8WW33 167 aa11.11□□□□□ -0.63
CHD1L-211ENST00000639534 PGLYRP4Q96LB8 373 aa11.11□□□□□ -0.63
CHD1L-211ENST00000639534 LENEPQ9Y5L5 61 aa11.11□□□□□ -0.63
CHD1L-211ENST00000639534 SPTAN1Q13813 2472 aaKnown RBP11.11□□□□□ -0.63
CHD1L-211ENST00000639534 CR1P17927 2039 aa11.1□□□□□ -0.63
CHD1L-211ENST00000639534 TRAV8-2A0A0B4J237 113 aa11.1□□□□□ -0.63
CHD1L-211ENST00000639534 OVOL1O14753 267 aa11.1□□□□□ -0.63
CHD1L-211ENST00000639534 SH2D1AO60880 128 aa11.1□□□□□ -0.63
CHD1L-211ENST00000639534 RNF152Q8N8N0 203 aa11.1□□□□□ -0.63
CHD1L-211ENST00000639534 MYOZ3Q8TDC0 251 aa11.1□□□□□ -0.63
CHD1L-211ENST00000639534 C8orf49Q96NF6 230 aa11.1□□□□□ -0.63
CHD1L-211ENST00000639534 ASCL2Q99929 193 aa11.1□□□□□ -0.63
CHD1L-211ENST00000639534 VGLL1Q99990 258 aa11.1□□□□□ -0.63
CHD1L-211ENST00000639534 PRRC2AP48634 2157 aaKnown RBP11.1□□□□□ -0.63
CHD1L-211ENST00000639534 MED13LQ71F56 2210 aa11.09□□□□□ -0.63
CHD1L-211ENST00000639534 IGHV3OR16-13A0A075B7E8 117 aa11.09□□□□□ -0.63
CHD1L-211ENST00000639534 IGHV3-49A0A0A0MS15 119 aa11.09□□□□□ -0.63
CHD1L-211ENST00000639534 IGHV3-74A0A0B4J1X5 117 aa11.09□□□□□ -0.63
CHD1L-211ENST00000639534 A0A1B0GUT8 65 aa11.09□□□□□ -0.63
CHD1L-211ENST00000639534 FABP5P3A8MUU1 101 aa11.09□□□□□ -0.63
CHD1L-211ENST00000639534 ZNF705FA8MVS1 300 aaPredicted RBP11.09□□□□□ -0.63
CHD1L-211ENST00000639534 LGALS1P09382 135 aaKnown RBP11.09□□□□□ -0.63
CHD1L-211ENST00000639534 FRMD6-AS1P0C7T7 363 aa11.09□□□□□ -0.63
CHD1L-211ENST00000639534 HLA-DMBP28068 263 aa11.09□□□□□ -0.63
CHD1L-211ENST00000639534 CRIP1P50238 77 aa11.09□□□□□ -0.63
CHD1L-211ENST00000639534 ZNF138P52744 262 aa11.09□□□□□ -0.63
CHD1L-211ENST00000639534 SCGB2A2Q13296 93 aa11.09□□□□□ -0.63
CHD1L-211ENST00000639534 TMEM95Q3KNT9 176 aa11.09□□□□□ -0.63
CHD1L-211ENST00000639534 C9orf47Q6ZRZ4 202 aa11.09□□□□□ -0.63
CHD1L-211ENST00000639534 GATD1Q8NB37 220 aa11.09□□□□□ -0.63
CHD1L-211ENST00000639534 WFDC11Q8NEX6 87 aa11.09□□□□□ -0.63
CHD1L-211ENST00000639534 UBE2E2Q96LR5 201 aa11.09□□□□□ -0.63
CHD1L-211ENST00000639534 NRN1Q9NPD7 142 aa11.09□□□□□ -0.63
CHD1L-211ENST00000639534 NIT2Q9NQR4 276 aa11.09□□□□□ -0.63
CHD1L-211ENST00000639534 SMPXQ9UHP9 88 aa11.09□□□□□ -0.63
CHD1L-211ENST00000639534 ANKRD17O75179 2603 aaKnown RBP11.09□□□□□ -0.63
CHD1L-211ENST00000639534 EPG5Q9HCE0 2579 aa11.09□□□□□ -0.63
CHD1L-211ENST00000639534 GRIFINA4D1Z8 144 aa11.08□□□□□ -0.64
CHD1L-211ENST00000639534 SRIP30626 198 aa11.08□□□□□ -0.64
CHD1L-211ENST00000639534 CAMPP49913 170 aa11.08□□□□□ -0.64
CHD1L-211ENST00000639534 HIST1H1AQ02539 215 aaPredicted RBP11.08□□□□□ -0.64
CHD1L-211ENST00000639534 KLF5Q13887 457 aaPredicted RBP11.08□□□□□ -0.64
CHD1L-211ENST00000639534 IGFL4Q6B9Z1 124 aa11.08□□□□□ -0.64
CHD1L-211ENST00000639534 REC114Q7Z4M0 266 aa11.08□□□□□ -0.64
CHD1L-211ENST00000639534 SIGLECL1Q8N7X8 197 aa11.08□□□□□ -0.64
CHD1L-211ENST00000639534 LINC00477Q96M19 166 aa11.08□□□□□ -0.64
CHD1L-211ENST00000639534 RHPN1-AS1Q9BWJ2 59 aa11.08□□□□□ -0.64
CHD1L-211ENST00000639534 LRRK2Q5S007 2527 aa11.08□□□□□ -0.64
CHD1L-211ENST00000639534 UTP20O75691 2785 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms