RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 SAP30O75446 220 aa8.55□□□□□ -1.04
SNIP1-204ENST00000638725 OR1N2Q8NGR9 330 aa8.55□□□□□ -1.04
SNIP1-204ENST00000638725 JKAMPQ9P055 326 aa8.55□□□□□ -1.04
SNIP1-204ENST00000638725 PAX8Q06710 450 aa8.55□□□□□ -1.04
SNIP1-204ENST00000638725 UFSP1Q6NVU6 142 aa8.55□□□□□ -1.04
SNIP1-204ENST00000638725 Q8TAT8 98 aa8.55□□□□□ -1.04
SNIP1-204ENST00000638725 IFI27L1Q96BM0 104 aa8.55□□□□□ -1.04
SNIP1-204ENST00000638725 SRSF8Q9BRL6 282 aaKnown RBP8.55□□□□□ -1.04
SNIP1-204ENST00000638725 ONECUT1Q9UBC0 465 aa8.55□□□□□ -1.04
SNIP1-204ENST00000638725 A1L4Q6 167 aa8.54□□□□□ -1.04
SNIP1-204ENST00000638725 C9orf118A6NHY6 69 aa8.54□□□□□ -1.04
SNIP1-204ENST00000638725 H3BRM9 83 aa8.54□□□□□ -1.04
SNIP1-204ENST00000638725 EGR2P11161 476 aaPredicted RBP8.54□□□□□ -1.04
SNIP1-204ENST00000638725 CKS2P33552 79 aa8.54□□□□□ -1.04
SNIP1-204ENST00000638725 PDE6HQ13956 83 aa8.54□□□□□ -1.04
SNIP1-204ENST00000638725 KIR3DS1Q14943 382 aa8.54□□□□□ -1.04
SNIP1-204ENST00000638725 IGFL4Q6B9Z1 124 aa8.54□□□□□ -1.04
SNIP1-204ENST00000638725 PRSS57Q6UWY2 283 aa8.54□□□□□ -1.04
SNIP1-204ENST00000638725 PCP2Q8IVA1 136 aa8.54□□□□□ -1.04
SNIP1-204ENST00000638725 TMEM190Q8WZ59 177 aa8.54□□□□□ -1.04
SNIP1-204ENST00000638725 AP1S3Q96PC3 154 aa8.54□□□□□ -1.04
SNIP1-204ENST00000638725 RNF5Q99942 180 aa8.54□□□□□ -1.04
SNIP1-204ENST00000638725 TPRP12270 2363 aaKnown RBP8.54□□□□□ -1.04
SNIP1-204ENST00000638725 A6NDN8 102 aa8.54□□□□□ -1.04
SNIP1-204ENST00000638725 K7ERU9 68 aa8.54□□□□□ -1.04
SNIP1-204ENST00000638725 NBR2O15453 112 aa8.54□□□□□ -1.04
SNIP1-204ENST00000638725 IGHV3-23P01764 117 aa8.54□□□□□ -1.04
SNIP1-204ENST00000638725 NMUP48645 174 aa8.54□□□□□ -1.04
SNIP1-204ENST00000638725 ZNF80P51504 273 aaPredicted RBP8.54□□□□□ -1.04
SNIP1-204ENST00000638725 TWIST1Q15672 202 aa8.54□□□□□ -1.04
SNIP1-204ENST00000638725 RAB37Q96AX2 223 aa8.54□□□□□ -1.04
SNIP1-204ENST00000638725 BSNQ9UPA5 3926 aa8.53□□□□□ -1.04
SNIP1-204ENST00000638725 HSD52Q0P140 79 aa8.53□□□□□ -1.04
SNIP1-204ENST00000638725 SMIM15Q7Z3B0 74 aa8.53□□□□□ -1.04
SNIP1-204ENST00000638725 FER1L6-AS1Q8NA97 138 aa8.53□□□□□ -1.04
SNIP1-204ENST00000638725 FANCD2OSQ96PS1 177 aa8.53□□□□□ -1.04
SNIP1-204ENST00000638725 PRR25Q96S07 402 aa8.53□□□□□ -1.04
SNIP1-204ENST00000638725 MEGF9Q9H1U4 602 aa8.53□□□□□ -1.04
SNIP1-204ENST00000638725 DKK2Q9UBU2 259 aa8.53□□□□□ -1.04
SNIP1-204ENST00000638725 NPIPB5A8MRT5 1133 aa8.53□□□□□ -1.04
SNIP1-204ENST00000638725 F8W735 103 aaPredicted RBP8.53□□□□□ -1.04
SNIP1-204ENST00000638725 NDUFS7O75251 213 aa8.53□□□□□ -1.04
SNIP1-204ENST00000638725 HLA-DMBP28068 263 aa8.53□□□□□ -1.04
SNIP1-204ENST00000638725 ADAMTSL5Q6ZMM2 481 aa8.53□□□□□ -1.04
SNIP1-204ENST00000638725 C18orf15Q96N68 181 aa8.53□□□□□ -1.04
SNIP1-204ENST00000638725 RAB1BQ9H0U4 201 aa8.53□□□□□ -1.04
SNIP1-204ENST00000638725 APC2O95996 2303 aa8.53□□□□□ -1.04
SNIP1-204ENST00000638725 CSMD1Q96PZ7 3565 aa8.53□□□□□ -1.04
SNIP1-204ENST00000638725 GTF2H5Q6ZYL4 71 aa8.52□□□□□ -1.05
SNIP1-204ENST00000638725 OR9G4Q8NGQ1 327 aa8.52□□□□□ -1.05
SNIP1-204ENST00000638725 VGLL1Q99990 258 aa8.52□□□□□ -1.05
SNIP1-204ENST00000638725 MSRB1Q9NZV6 116 aa8.52□□□□□ -1.05
SNIP1-204ENST00000638725 POLEQ07864 2286 aa8.52□□□□□ -1.05
SNIP1-204ENST00000638725 A0A0G2JLM5 398 aa8.52□□□□□ -1.05
SNIP1-204ENST00000638725 GAS8-AS1O95177 125 aa8.52□□□□□ -1.05
SNIP1-204ENST00000638725 MFAP4P55083 255 aa8.52□□□□□ -1.05
SNIP1-204ENST00000638725 KLRD1Q13241 179 aa8.52□□□□□ -1.05
SNIP1-204ENST00000638725 TM4SF20Q53R12 229 aa8.52□□□□□ -1.05
SNIP1-204ENST00000638725 CFHR4Q92496 578 aa8.52□□□□□ -1.05
SNIP1-204ENST00000638725 ATMQ13315 3056 aa8.52□□□□□ -1.05
SNIP1-204ENST00000638725 ARHGAP32A7KAX9 2087 aa8.52□□□□□ -1.05
SNIP1-204ENST00000638725 IGLV11-55A0A075B6I3 123 aa8.51□□□□□ -1.05
SNIP1-204ENST00000638725 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.51□□□□□ -1.05
SNIP1-204ENST00000638725 B9A039 149 aa8.51□□□□□ -1.05
SNIP1-204ENST00000638725 S100A7P31151 101 aa8.51□□□□□ -1.05
SNIP1-204ENST00000638725 HES1Q14469 280 aa8.51□□□□□ -1.05
SNIP1-204ENST00000638725 IGHV3OR16-8A0A075B7F1 116 aa8.51□□□□□ -1.05
SNIP1-204ENST00000638725 K7EP34 96 aa8.51□□□□□ -1.05
SNIP1-204ENST00000638725 NDUFA3O95167 84 aa8.51□□□□□ -1.05
SNIP1-204ENST00000638725 IGLC6P0CF74 106 aa8.51□□□□□ -1.05
SNIP1-204ENST00000638725 NDPQ00604 133 aa8.51□□□□□ -1.05
SNIP1-204ENST00000638725 ZNF575Q86XF7 245 aa8.51□□□□□ -1.05
SNIP1-204ENST00000638725 OR4X2Q8NGF9 303 aa8.51□□□□□ -1.05
SNIP1-204ENST00000638725 ABHD17AQ96GS6 310 aa8.51□□□□□ -1.05
SNIP1-204ENST00000638725 SIVA1O15304 175 aa8.5□□□□□ -1.05
SNIP1-204ENST00000638725 COX8CQ7Z4L0 72 aa8.5□□□□□ -1.05
SNIP1-204ENST00000638725 S100A7AQ86SG5 101 aa8.5□□□□□ -1.05
SNIP1-204ENST00000638725 OR2K2Q8NGT1 345 aa8.5□□□□□ -1.05
SNIP1-204ENST00000638725 CSTL1Q9H114 145 aa8.5□□□□□ -1.05
SNIP1-204ENST00000638725 DPM3Q9P2X0 92 aa8.5□□□□□ -1.05
SNIP1-204ENST00000638725 CD3EP07766 207 aa8.5□□□□□ -1.05
SNIP1-204ENST00000638725 RIPPLY3P57055 190 aa8.5□□□□□ -1.05
SNIP1-204ENST00000638725 PRR30Q53SZ7 412 aaPredicted RBP8.5□□□□□ -1.05
SNIP1-204ENST00000638725 Q8NA96 180 aa8.5□□□□□ -1.05
SNIP1-204ENST00000638725 RNF185Q96GF1 192 aa8.5□□□□□ -1.05
SNIP1-204ENST00000638725 TTTY13Q9BZ97 58 aa8.5□□□□□ -1.05
SNIP1-204ENST00000638725 C21orf62Q9NYP8 219 aa8.5□□□□□ -1.05
SNIP1-204ENST00000638725 SMAD5-AS1Q9Y6J3 95 aa8.5□□□□□ -1.05
SNIP1-204ENST00000638725 TACC2O95359 2948 aa8.5□□□□□ -1.05
SNIP1-204ENST00000638725 ZNF318Q5VUA4 2279 aa8.5□□□□□ -1.05
SNIP1-204ENST00000638725 IGHV3-35A0A0C4DH35 117 aa8.5□□□□□ -1.05
SNIP1-204ENST00000638725 LY6HO94772 140 aa8.5□□□□□ -1.05
SNIP1-204ENST00000638725 IGHG4P01861 327 aa8.5□□□□□ -1.05
SNIP1-204ENST00000638725 ORM1P02763 201 aa8.5□□□□□ -1.05
SNIP1-204ENST00000638725 RPL7P18124 248 aaKnown RBP8.5□□□□□ -1.05
SNIP1-204ENST00000638725 C5orf64Q2M2E5 130 aa8.5□□□□□ -1.05
SNIP1-204ENST00000638725 NPBQ8NG41 125 aa8.5□□□□□ -1.05
SNIP1-204ENST00000638725 IGKV2D-26A0A0A0MRZ7 120 aa8.49□□□□□ -1.05
SNIP1-204ENST00000638725 BMI1P35226 326 aa8.49□□□□□ -1.05
SNIP1-204ENST00000638725 MAP1LC3AQ9H492 121 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms