RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 C14orf144Q96I85 54 aa16.64■□□□□ 0.25
CLN6-224ENST00000638076 IGHG4P01861 327 aa16.64■□□□□ 0.25
CLN6-224ENST00000638076 APOHP02749 345 aaPredicted RBP16.64■□□□□ 0.25
CLN6-224ENST00000638076 FAM19A2Q8N3H0 131 aa16.64■□□□□ 0.25
CLN6-224ENST00000638076 IGHV3-66A0A0C4DH42 116 aa16.63■□□□□ 0.25
CLN6-224ENST00000638076 RAB9AP51151 201 aa16.63■□□□□ 0.25
CLN6-224ENST00000638076 HAX1O00165 279 aa16.63■□□□□ 0.25
CLN6-224ENST00000638076 CRIP2P52943 208 aaPredicted RBP16.63■□□□□ 0.25
CLN6-224ENST00000638076 RELQ04864 619 aaPredicted RBP16.63■□□□□ 0.25
CLN6-224ENST00000638076 SPG11Q96JI7 2443 aa16.62■□□□□ 0.25
CLN6-224ENST00000638076 H3BUX3 64 aa16.62■□□□□ 0.25
CLN6-224ENST00000638076 CRYBG3Q68DQ2 2970 aa16.62■□□□□ 0.25
CLN6-224ENST00000638076 IGHV3OR16-13A0A075B7E8 117 aa16.62■□□□□ 0.25
CLN6-224ENST00000638076 IGHV3-74A0A0B4J1X5 117 aa16.62■□□□□ 0.25
CLN6-224ENST00000638076 NTF3P20783 257 aa16.62■□□□□ 0.25
CLN6-224ENST00000638076 KRTDAPP60985 99 aa16.62■□□□□ 0.25
CLN6-224ENST00000638076 HIF1ANQ9NWT6 349 aa16.62■□□□□ 0.25
CLN6-224ENST00000638076 CELSR2Q9HCU4 2923 aa16.61■□□□□ 0.25
CLN6-224ENST00000638076 A0A1B0GUT8 65 aa16.61■□□□□ 0.25
CLN6-224ENST00000638076 PRR25Q96S07 402 aa16.61■□□□□ 0.25
CLN6-224ENST00000638076 VGLL1Q99990 258 aa16.61■□□□□ 0.25
CLN6-224ENST00000638076 A0A087X0K7 114 aa16.61■□□□□ 0.25
CLN6-224ENST00000638076 FAM223BA6NKX1 122 aa16.61■□□□□ 0.25
CLN6-224ENST00000638076 TRGV3P03979 118 aa16.61■□□□□ 0.25
CLN6-224ENST00000638076 ARMS2P0C7Q2 107 aa16.61■□□□□ 0.25
CLN6-224ENST00000638076 SAPCD1Q5SSQ6 148 aa16.61■□□□□ 0.25
CLN6-224ENST00000638076 REC114Q7Z4M0 266 aa16.61■□□□□ 0.25
CLN6-224ENST00000638076 NIT1Q86X76 327 aa16.61■□□□□ 0.25
CLN6-224ENST00000638076 FAM223AQ8IWN6 122 aa16.61■□□□□ 0.25
CLN6-224ENST00000638076 Q8TAT8 98 aa16.61■□□□□ 0.25
CLN6-224ENST00000638076 ZNF207O43670 478 aaKnown RBP16.6■□□□□ 0.25
CLN6-224ENST00000638076 C1orf194Q5T5A4 169 aa16.6■□□□□ 0.25
CLN6-224ENST00000638076 LCN12Q6JVE5 192 aa16.6■□□□□ 0.25
CLN6-224ENST00000638076 B4DSR2 109 aa16.59■□□□□ 0.25
CLN6-224ENST00000638076 HSBP1O75506 76 aa16.59■□□□□ 0.25
CLN6-224ENST00000638076 RNASEKQ6P5S7 137 aaKnown RBP16.59■□□□□ 0.25
CLN6-224ENST00000638076 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.59■□□□□ 0.25
CLN6-224ENST00000638076 METTL26Q96S19 204 aa16.59■□□□□ 0.25
CLN6-224ENST00000638076 IGHV3-49A0A0A0MS15 119 aa16.59■□□□□ 0.25
CLN6-224ENST00000638076 A6NDX4 124 aa16.59■□□□□ 0.25
CLN6-224ENST00000638076 SH2D1AO60880 128 aa16.59■□□□□ 0.25
CLN6-224ENST00000638076 AVPP01185 164 aa16.59■□□□□ 0.25
CLN6-224ENST00000638076 FAM162BQ5T6X4 162 aa16.59■□□□□ 0.25
CLN6-224ENST00000638076 TEX43Q6ZNM6 134 aa16.59■□□□□ 0.25
CLN6-224ENST00000638076 COX8CQ7Z4L0 72 aa16.59■□□□□ 0.25
CLN6-224ENST00000638076 BBC3Q96PG8 261 aaPredicted RBP16.59■□□□□ 0.25
CLN6-224ENST00000638076 TPPP3Q9BW30 176 aa16.59■□□□□ 0.25
CLN6-224ENST00000638076 UTP20O75691 2785 aaKnown RBP16.59■□□□□ 0.25
CLN6-224ENST00000638076 FBLL1A6NHQ2 334 aaKnown RBP16.58■□□□□ 0.25
CLN6-224ENST00000638076 IGF1P05019 195 aa16.58■□□□□ 0.25
CLN6-224ENST00000638076 TDRG1Q3Y452 100 aa16.58■□□□□ 0.25
CLN6-224ENST00000638076 LOC102724200A0A096LPH7 203 aaPredicted RBP16.58■□□□□ 0.24
CLN6-224ENST00000638076 DSCR9P59020 149 aa16.58■□□□□ 0.24
CLN6-224ENST00000638076 RIGQ13278 110 aa16.58■□□□□ 0.24
CLN6-224ENST00000638076 TMSB15BA0A087X1C1 80 aa16.57■□□□□ 0.24
CLN6-224ENST00000638076 KIR2DL5BA0A0G2JN68 375 aa16.57■□□□□ 0.24
CLN6-224ENST00000638076 KIR2DL5BA0A0G2JPC4 375 aa16.57■□□□□ 0.24
CLN6-224ENST00000638076 TMEM189A5PLL7 270 aa16.57■□□□□ 0.24
CLN6-224ENST00000638076 KIR2DL5AQ8N109 375 aa16.57■□□□□ 0.24
CLN6-224ENST00000638076 RNF182Q8N6D2 247 aa16.57■□□□□ 0.24
CLN6-224ENST00000638076 IGHG2P01859 326 aa16.57■□□□□ 0.24
CLN6-224ENST00000638076 Q6AWC8 147 aa16.57■□□□□ 0.24
CLN6-224ENST00000638076 ATP6V0BQ99437 205 aa16.57■□□□□ 0.24
CLN6-224ENST00000638076 MAP1AP78559 2803 aaPredicted RBP16.57■□□□□ 0.24
CLN6-224ENST00000638076 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.56■□□□□ 0.24
CLN6-224ENST00000638076 Q8N976 141 aa16.56■□□□□ 0.24
CLN6-224ENST00000638076 SLC50A1Q9BRV3 221 aa16.56■□□□□ 0.24
CLN6-224ENST00000638076 NDFIP1Q9BT67 221 aa16.56■□□□□ 0.24
CLN6-224ENST00000638076 NDUFAF3Q9BU61 184 aa16.56■□□□□ 0.24
CLN6-224ENST00000638076 CSMD2Q7Z408 3487 aa16.56■□□□□ 0.24
CLN6-224ENST00000638076 PRAC2D3DTV9 90 aa16.56■□□□□ 0.24
CLN6-224ENST00000638076 BLCAPP62952 87 aa16.56■□□□□ 0.24
CLN6-224ENST00000638076 BORCS7Q96B45 105 aa16.56■□□□□ 0.24
CLN6-224ENST00000638076 URB1-AS1Q96HZ7 61 aa16.56■□□□□ 0.24
CLN6-224ENST00000638076 USP24Q9UPU5 2620 aa16.55■□□□□ 0.24
CLN6-224ENST00000638076 M0R2Z0 102 aa16.55■□□□□ 0.24
CLN6-224ENST00000638076 C3orf79P0CE67 100 aa16.55■□□□□ 0.24
CLN6-224ENST00000638076 ARL3P36405 182 aa16.55■□□□□ 0.24
CLN6-224ENST00000638076 ZNF80P51504 273 aaPredicted RBP16.55■□□□□ 0.24
CLN6-224ENST00000638076 M0QZ24 198 aa16.54■□□□□ 0.24
CLN6-224ENST00000638076 PPIFP30405 207 aaKnown RBP16.54■□□□□ 0.24
CLN6-224ENST00000638076 ERCC8Q13216 396 aa16.54■□□□□ 0.24
CLN6-224ENST00000638076 U3KQE9 123 aa16.54■□□□□ 0.24
CLN6-224ENST00000638076 MYO18BQ8IUG5 2567 aa16.54■□□□□ 0.24
CLN6-224ENST00000638076 M0QZK8 103 aa16.54■□□□□ 0.24
CLN6-224ENST00000638076 SLC25A16P16260 332 aa16.53■□□□□ 0.24
CLN6-224ENST00000638076 LYZL1Q6UWQ5 148 aa16.53■□□□□ 0.24
CLN6-224ENST00000638076 Q6ZS46 218 aa16.53■□□□□ 0.24
CLN6-224ENST00000638076 A0A1B0GW15 77 aa16.53■□□□□ 0.24
CLN6-224ENST00000638076 TRBV12-3P01733 135 aa16.53■□□□□ 0.24
CLN6-224ENST00000638076 VAMP8Q9BV40 100 aa16.53■□□□□ 0.24
CLN6-224ENST00000638076 PAM16Q9Y3D7 125 aa16.53■□□□□ 0.24
CLN6-224ENST00000638076 GATA3P23771 443 aa16.52■□□□□ 0.24
CLN6-224ENST00000638076 BMI1P35226 326 aa16.52■□□□□ 0.24
CLN6-224ENST00000638076 GATD1Q8NB37 220 aa16.52■□□□□ 0.24
CLN6-224ENST00000638076 COX6B1P14854 86 aa16.52■□□□□ 0.23
CLN6-224ENST00000638076 TRAV8-2A0A0B4J237 113 aa16.51■□□□□ 0.23
CLN6-224ENST00000638076 FAM181BA6NEQ2 426 aa16.51■□□□□ 0.23
CLN6-224ENST00000638076 C8orf86Q6ZUL3 223 aa16.51■□□□□ 0.23
CLN6-224ENST00000638076 A1L4Q6 167 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms