RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 LINC00612Q8N6U2 182 aa12.88□□□□□ -0.35
CLN6-220ENST00000637450 C20orf85Q9H1P6 137 aa12.88□□□□□ -0.35
CLN6-220ENST00000637450 RAB31Q13636 194 aa12.87□□□□□ -0.35
CLN6-220ENST00000637450 ZNF846Q147U1 533 aa12.87□□□□□ -0.35
CLN6-220ENST00000637450 Q6ZRG5 221 aa12.87□□□□□ -0.35
CLN6-220ENST00000637450 NRARPQ7Z6K4 114 aa12.87□□□□□ -0.35
CLN6-220ENST00000637450 CCDC28AQ8IWP9 274 aa12.87□□□□□ -0.35
CLN6-220ENST00000637450 C11orf1Q9H5F2 150 aa12.87□□□□□ -0.35
CLN6-220ENST00000637450 LSM5Q9Y4Y9 91 aaKnown RBP12.87□□□□□ -0.35
CLN6-220ENST00000637450 DNAH5Q8TE73 4624 aa12.86□□□□□ -0.35
CLN6-220ENST00000637450 TRAV5A0A0B4J249 113 aa12.86□□□□□ -0.35
CLN6-220ENST00000637450 CT45A10P0DMU9 189 aa12.86□□□□□ -0.35
CLN6-220ENST00000637450 BCAP31P51572 246 aa12.86□□□□□ -0.35
CLN6-220ENST00000637450 OR5I1Q13606 314 aa12.86□□□□□ -0.35
CLN6-220ENST00000637450 CLINT1Q14677 625 aa12.86□□□□□ -0.35
CLN6-220ENST00000637450 GUK1Q16774 197 aa12.86□□□□□ -0.35
CLN6-220ENST00000637450 MIC13Q5XKP0 118 aa12.86□□□□□ -0.35
CLN6-220ENST00000637450 SSX7Q7RTT5 188 aa12.86□□□□□ -0.35
CLN6-220ENST00000637450 WDR83OSQ9Y284 106 aa12.86□□□□□ -0.35
CLN6-220ENST00000637450 FAM24AA6NFZ4 105 aa12.85□□□□□ -0.35
CLN6-220ENST00000637450 FAM25EA8MYX2 175 aa12.85□□□□□ -0.35
CLN6-220ENST00000637450 LYRM1O43325 122 aa12.85□□□□□ -0.35
CLN6-220ENST00000637450 CST7O76096 145 aa12.85□□□□□ -0.35
CLN6-220ENST00000637450 TCRBP04435 133 aa12.85□□□□□ -0.35
CLN6-220ENST00000637450 CAV2P51636 162 aa12.85□□□□□ -0.35
CLN6-220ENST00000637450 OR1L4Q8NGR5 311 aa12.85□□□□□ -0.35
CLN6-220ENST00000637450 ODF3Q96PU9 254 aa12.85□□□□□ -0.35
CLN6-220ENST00000637450 TRAV26-1A0A087WT03 109 aa12.84□□□□□ -0.35
CLN6-220ENST00000637450 NPIPB6E9PJ23 425 aa12.84□□□□□ -0.35
CLN6-220ENST00000637450 M6PRP20645 277 aa12.84□□□□□ -0.35
CLN6-220ENST00000637450 VWC2Q2TAL6 325 aa12.84□□□□□ -0.35
CLN6-220ENST00000637450 RXFP4Q8TDU9 374 aa12.84□□□□□ -0.35
CLN6-220ENST00000637450 ZNF431Q8TF32 576 aaPredicted RBP12.84□□□□□ -0.35
CLN6-220ENST00000637450 GNPNAT1Q96EK6 184 aaPredicted RBP12.84□□□□□ -0.35
CLN6-220ENST00000637450 ZNF503Q96F45 646 aa12.84□□□□□ -0.35
CLN6-220ENST00000637450 Q9H8V8 135 aa12.84□□□□□ -0.35
CLN6-220ENST00000637450 UQCC1Q9NVA1 299 aa12.84□□□□□ -0.35
CLN6-220ENST00000637450 ZNF586Q9NXT0 402 aa12.84□□□□□ -0.35
CLN6-220ENST00000637450 TRAV6A0A075B6T7 132 aa12.83□□□□□ -0.36
CLN6-220ENST00000637450 GAGE12BA1L429 117 aa12.83□□□□□ -0.36
CLN6-220ENST00000637450 C5orf51A6NDU8 294 aa12.83□□□□□ -0.36
CLN6-220ENST00000637450 J3KRW8 73 aa12.83□□□□□ -0.36
CLN6-220ENST00000637450 GAGE7O76087 117 aa12.83□□□□□ -0.36
CLN6-220ENST00000637450 RLN2P04090 185 aa12.83□□□□□ -0.36
CLN6-220ENST00000637450 GAGE12FP0CL80 117 aa12.83□□□□□ -0.36
CLN6-220ENST00000637450 GAGE12GP0CL81 117 aa12.83□□□□□ -0.36
CLN6-220ENST00000637450 GAGE12IP0CL82 117 aa12.83□□□□□ -0.36
CLN6-220ENST00000637450 HOXA5P20719 270 aa12.83□□□□□ -0.36
CLN6-220ENST00000637450 LEPP41159 167 aa12.83□□□□□ -0.36
CLN6-220ENST00000637450 RPL29P47914 159 aaKnown RBP12.83□□□□□ -0.36
CLN6-220ENST00000637450 C2orf50Q96LR7 162 aa12.83□□□□□ -0.36
CLN6-220ENST00000637450 PFDN5Q99471 154 aa12.83□□□□□ -0.36
CLN6-220ENST00000637450 SEC22CQ9BRL7 303 aa12.83□□□□□ -0.36
CLN6-220ENST00000637450 KRTAP4-5Q9BYR2 181 aa12.83□□□□□ -0.36
CLN6-220ENST00000637450 TRAV12-3A0A0B4J271 114 aa12.82□□□□□ -0.36
CLN6-220ENST00000637450 A0A0J9YY99 117 aa12.82□□□□□ -0.36
CLN6-220ENST00000637450 C16orf90A8MZG2 172 aa12.82□□□□□ -0.36
CLN6-220ENST00000637450 SNURFLB1AK76 121 aa12.82□□□□□ -0.36
CLN6-220ENST00000637450 ZNF253O75346 499 aa12.82□□□□□ -0.36
CLN6-220ENST00000637450 S100A11P31949 105 aa12.82□□□□□ -0.36
CLN6-220ENST00000637450 SULT1A1P50225 295 aa12.82□□□□□ -0.36
CLN6-220ENST00000637450 C12orf45Q8N5I9 185 aaPredicted RBP12.82□□□□□ -0.36
CLN6-220ENST00000637450 CHAC2Q8WUX2 184 aa12.82□□□□□ -0.36
CLN6-220ENST00000637450 SLC39A9Q9NUM3 307 aa12.82□□□□□ -0.36
CLN6-220ENST00000637450 TRBV19A0A075B6N1 114 aa12.81□□□□□ -0.36
CLN6-220ENST00000637450 PVALBP20472 110 aaPredicted RBP12.81□□□□□ -0.36
CLN6-220ENST00000637450 DAZ2Q13117 558 aaKnown RBP12.81□□□□□ -0.36
CLN6-220ENST00000637450 IL15RAQ13261 267 aa12.81□□□□□ -0.36
CLN6-220ENST00000637450 MRPL53Q96EL3 112 aaKnown RBP12.81□□□□□ -0.36
CLN6-220ENST00000637450 PYGO2Q9BRQ0 406 aa12.81□□□□□ -0.36
CLN6-220ENST00000637450 LYRM2Q9NU23 88 aaPredicted RBP12.81□□□□□ -0.36
CLN6-220ENST00000637450 NUDT15Q9NV35 164 aa12.81□□□□□ -0.36
CLN6-220ENST00000637450 APOBP04114 4563 aaKnown RBP12.8□□□□□ -0.36
CLN6-220ENST00000637450 H3BNG1 76 aa12.8□□□□□ -0.36
CLN6-220ENST00000637450 ESRGQ1W209 222 aa12.8□□□□□ -0.36
CLN6-220ENST00000637450 TMEM252Q8N6L7 170 aa12.8□□□□□ -0.36
CLN6-220ENST00000637450 TMEM14CQ9P0S9 112 aa12.8□□□□□ -0.36
CLN6-220ENST00000637450 UBE2L5PA0A1B0GUS4 154 aa12.79□□□□□ -0.36
CLN6-220ENST00000637450 IGSF23A1L1A6 192 aa12.79□□□□□ -0.36
CLN6-220ENST00000637450 CDK2AP2O75956 126 aa12.79□□□□□ -0.36
CLN6-220ENST00000637450 SLC25A5P05141 298 aaKnown RBP12.79□□□□□ -0.36
CLN6-220ENST00000637450 BAXQ07812 192 aa12.79□□□□□ -0.36
CLN6-220ENST00000637450 ERCC8Q13216 396 aa12.79□□□□□ -0.36
CLN6-220ENST00000637450 UPK3BQ9BT76 320 aa12.79□□□□□ -0.36
CLN6-220ENST00000637450 KRTAP1-5Q9BYS1 174 aa12.79□□□□□ -0.36
CLN6-220ENST00000637450 M0R3E3 92 aa12.78□□□□□ -0.36
CLN6-220ENST00000637450 NDUFB4O95168 129 aa12.78□□□□□ -0.36
CLN6-220ENST00000637450 H2AFB2P0C5Z0 115 aa12.78□□□□□ -0.36
CLN6-220ENST00000637450 HIST1H1EP10412 219 aaKnown RBP12.78□□□□□ -0.36
CLN6-220ENST00000637450 S100A10P60903 97 aa12.78□□□□□ -0.36
CLN6-220ENST00000637450 HBG1P69891 147 aa12.78□□□□□ -0.36
CLN6-220ENST00000637450 HBG2P69892 147 aa12.78□□□□□ -0.36
CLN6-220ENST00000637450 RAB32Q13637 225 aa12.78□□□□□ -0.36
CLN6-220ENST00000637450 ATP6V1FQ16864 119 aa12.78□□□□□ -0.36
CLN6-220ENST00000637450 Q6ZTI0 123 aa12.78□□□□□ -0.36
CLN6-220ENST00000637450 STX12Q86Y82 276 aa12.78□□□□□ -0.36
CLN6-220ENST00000637450 FAM19A4Q96LR4 140 aa12.78□□□□□ -0.36
CLN6-220ENST00000637450 LINC00477Q96M19 166 aa12.78□□□□□ -0.36
CLN6-220ENST00000637450 Q9H3A6 140 aa12.78□□□□□ -0.36
CLN6-220ENST00000637450 TMPRSS5Q9H3S3 457 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms