RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 TRAV8-2A0A0B4J237 113 aa12.73□□□□□ -0.37
CLN5-218ENST00000637397 ERCC8Q13216 396 aa12.73□□□□□ -0.37
CLN5-218ENST00000637397 POU2AF1Q16633 256 aa12.73□□□□□ -0.37
CLN5-218ENST00000637397 FAM104BQ5XKR9 115 aa12.73□□□□□ -0.37
CLN5-218ENST00000637397 GTSF1LQ9H1H1 148 aa12.73□□□□□ -0.37
CLN5-218ENST00000637397 C7orf69Q9H7B7 122 aa12.73□□□□□ -0.37
CLN5-218ENST00000637397 TNCP24821 2201 aa12.73□□□□□ -0.37
CLN5-218ENST00000637397 Q6ZPA2 131 aa12.73□□□□□ -0.37
CLN5-218ENST00000637397 TMEM219Q86XT9 240 aa12.73□□□□□ -0.37
CLN5-218ENST00000637397 IGLV2-14P01704 120 aa12.73□□□□□ -0.37
CLN5-218ENST00000637397 CRIP3Q6Q6R5 217 aa12.73□□□□□ -0.37
CLN5-218ENST00000637397 CHAC1Q9BUX1 264 aa12.73□□□□□ -0.37
CLN5-218ENST00000637397 TNFRSF6BO95407 300 aa12.72□□□□□ -0.37
CLN5-218ENST00000637397 TRAV2A0A0B4J234 112 aa12.72□□□□□ -0.37
CLN5-218ENST00000637397 PDE6HQ13956 83 aa12.72□□□□□ -0.37
CLN5-218ENST00000637397 EML6Q6ZMW3 1958 aa12.72□□□□□ -0.37
CLN5-218ENST00000637397 E7EQL1 145 aa12.72□□□□□ -0.37
CLN5-218ENST00000637397 TMEM75Q8N9X5 138 aa12.72□□□□□ -0.37
CLN5-218ENST00000637397 IGHV3-64A0A075B6Q5 118 aa12.72□□□□□ -0.37
CLN5-218ENST00000637397 ESDP10768 282 aa12.72□□□□□ -0.37
CLN5-218ENST00000637397 C14orf178Q8N769 122 aaPredicted RBP12.71□□□□□ -0.37
CLN5-218ENST00000637397 Q8TCH9 128 aa12.71□□□□□ -0.37
CLN5-218ENST00000637397 TRAV40A0A0B4J280 105 aa12.71□□□□□ -0.37
CLN5-218ENST00000637397 LOXP28300 417 aaPredicted RBP12.71□□□□□ -0.37
CLN5-218ENST00000637397 PRSS57Q6UWY2 283 aa12.71□□□□□ -0.37
CLN5-218ENST00000637397 ODF3L1Q8IXM7 274 aa12.71□□□□□ -0.37
CLN5-218ENST00000637397 C2orf16Q68DN1 1984 aa12.71□□□□□ -0.38
CLN5-218ENST00000637397 HAX1O00165 279 aa12.71□□□□□ -0.38
CLN5-218ENST00000637397 FRMD6-AS1P0C7T7 363 aa12.71□□□□□ -0.38
CLN5-218ENST00000637397 IGLV3-9A0A075B6K5 115 aa12.7□□□□□ -0.38
CLN5-218ENST00000637397 RRN3P1Q2M238 152 aa12.7□□□□□ -0.38
CLN5-218ENST00000637397 COX8AP10176 69 aa12.7□□□□□ -0.38
CLN5-218ENST00000637397 PLNP26678 52 aa12.7□□□□□ -0.38
CLN5-218ENST00000637397 NPFFR1Q9GZQ6 430 aa12.7□□□□□ -0.38
CLN5-218ENST00000637397 TRAV41A0A0B4J266 112 aa12.7□□□□□ -0.38
CLN5-218ENST00000637397 OVOL1O14753 267 aa12.7□□□□□ -0.38
CLN5-218ENST00000637397 ZC2HC1AQ96GY0 325 aa12.7□□□□□ -0.38
CLN5-218ENST00000637397 DUX3Q96PT4 197 aa12.7□□□□□ -0.38
CLN5-218ENST00000637397 SPG11Q96JI7 2443 aa12.7□□□□□ -0.38
CLN5-218ENST00000637397 IGHV4-39P01824 125 aa12.69□□□□□ -0.38
CLN5-218ENST00000637397 CCL19Q99731 98 aa12.69□□□□□ -0.38
CLN5-218ENST00000637397 IGKV3D-20A0A0C4DH25 116 aa12.69□□□□□ -0.38
CLN5-218ENST00000637397 A8MWV9 139 aa12.69□□□□□ -0.38
CLN5-218ENST00000637397 MRPL51Q4U2R6 128 aaKnown RBP12.69□□□□□ -0.38
CLN5-218ENST00000637397 MORN5Q5VZ52 161 aa12.69□□□□□ -0.38
CLN5-218ENST00000637397 SPRNQ5BIV9 151 aa12.69□□□□□ -0.38
CLN5-218ENST00000637397 BVES-AS1Q5T3Y7 98 aa12.69□□□□□ -0.38
CLN5-218ENST00000637397 RNF182Q8N6D2 247 aa12.68□□□□□ -0.38
CLN5-218ENST00000637397 SIGLEC8Q9NYZ4 499 aa12.68□□□□□ -0.38
CLN5-218ENST00000637397 IGLC1P0CG04 106 aa12.68□□□□□ -0.38
CLN5-218ENST00000637397 LCNL1Q6ZST4 164 aa12.68□□□□□ -0.38
CLN5-218ENST00000637397 TMEM8BA6NDV4 472 aa12.68□□□□□ -0.38
CLN5-218ENST00000637397 PRSS46E5RG02 174 aa12.68□□□□□ -0.38
CLN5-218ENST00000637397 ZNF562Q6V9R5 426 aa12.68□□□□□ -0.38
CLN5-218ENST00000637397 THAP8Q8NA92 274 aa12.68□□□□□ -0.38
CLN5-218ENST00000637397 MED12LQ86YW9 2145 aa12.68□□□□□ -0.38
CLN5-218ENST00000637397 TEX36Q5VZQ5 186 aa12.68□□□□□ -0.38
CLN5-218ENST00000637397 NDUFB8O95169 186 aa12.67□□□□□ -0.38
CLN5-218ENST00000637397 SRSF8Q9BRL6 282 aaKnown RBP12.67□□□□□ -0.38
CLN5-218ENST00000637397 H3BRM9 83 aa12.67□□□□□ -0.38
CLN5-218ENST00000637397 MINOS1Q5TGZ0 78 aa12.67□□□□□ -0.38
CLN5-218ENST00000637397 ADAMTSL5Q6ZMM2 481 aa12.67□□□□□ -0.38
CLN5-218ENST00000637397 DPH3P1Q9H4G8 78 aa12.67□□□□□ -0.38
CLN5-218ENST00000637397 MINOS1-NBL1R4GNA1 71 aa12.67□□□□□ -0.38
CLN5-218ENST00000637397 OOSP1A8MZH6 123 aa12.67□□□□□ -0.38
CLN5-218ENST00000637397 PAX2Q02962 417 aa12.67□□□□□ -0.38
CLN5-218ENST00000637397 COPS9Q8WXC6 57 aa12.67□□□□□ -0.38
CLN5-218ENST00000637397 TSPAN13O95857 204 aa12.66□□□□□ -0.38
CLN5-218ENST00000637397 DNAL4O96015 105 aa12.66□□□□□ -0.38
CLN5-218ENST00000637397 C9orf139Q6ZV77 190 aa12.66□□□□□ -0.38
CLN5-218ENST00000637397 LINC00311Q8N616 119 aa12.66□□□□□ -0.38
CLN5-218ENST00000637397 WIPF2Q8TF74 440 aaPredicted RBP12.66□□□□□ -0.38
CLN5-218ENST00000637397 C17orf77Q96MU5 243 aa12.66□□□□□ -0.38
CLN5-218ENST00000637397 PRR25Q96S07 402 aa12.66□□□□□ -0.38
CLN5-218ENST00000637397 PGPEP1Q9NXJ5 209 aa12.66□□□□□ -0.38
CLN5-218ENST00000637397 KMT2EQ8IZD2 1858 aa12.66□□□□□ -0.38
CLN5-218ENST00000637397 C9orf118A6NHY6 69 aa12.66□□□□□ -0.38
CLN5-218ENST00000637397 ITLN2Q8WWU7 325 aaPredicted RBP12.66□□□□□ -0.38
CLN5-218ENST00000637397 IGLC7A0M8Q6 106 aa12.66□□□□□ -0.38
CLN5-218ENST00000637397 PRTN3P24158 256 aa12.66□□□□□ -0.38
CLN5-218ENST00000637397 M0R1W7 72 aa12.65□□□□□ -0.38
CLN5-218ENST00000637397 CCL25O15444 150 aa12.65□□□□□ -0.38
CLN5-218ENST00000637397 CSTL1Q9H114 145 aa12.65□□□□□ -0.38
CLN5-218ENST00000637397 NPYP01303 97 aa12.65□□□□□ -0.38
CLN5-218ENST00000637397 LTAP01374 205 aa12.65□□□□□ -0.38
CLN5-218ENST00000637397 RNASE1P07998 156 aaKnown RBP12.65□□□□□ -0.38
CLN5-218ENST00000637397 SCGB1A1P11684 91 aa12.65□□□□□ -0.38
CLN5-218ENST00000637397 ZNF295-AS1Q8N0V1 137 aa12.65□□□□□ -0.38
CLN5-218ENST00000637397 TMEM14CQ9P0S9 112 aa12.65□□□□□ -0.38
CLN5-218ENST00000637397 OR13C6PQ8NH95 151 aa12.65□□□□□ -0.38
CLN5-218ENST00000637397 FAM215AQ9Y5M1 114 aa12.65□□□□□ -0.38
CLN5-218ENST00000637397 K7EP13 123 aa12.65□□□□□ -0.38
CLN5-218ENST00000637397 KLF5Q13887 457 aaPredicted RBP12.65□□□□□ -0.38
CLN5-218ENST00000637397 LGALS9BQ3B8N2 356 aa12.65□□□□□ -0.38
CLN5-218ENST00000637397 LGALS9CQ6DKI2 356 aa12.65□□□□□ -0.38
CLN5-218ENST00000637397 TEX29Q8N6K0 151 aa12.65□□□□□ -0.38
CLN5-218ENST00000637397 LINC00173Q6ZV60 143 aa12.64□□□□□ -0.39
CLN5-218ENST00000637397 LINC01587Q99440 93 aa12.64□□□□□ -0.39
CLN5-218ENST00000637397 A0A0U1RRA0 63 aa12.64□□□□□ -0.39
CLN5-218ENST00000637397 CD28P10747 220 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms