RNA–Protein interactions for RNA: ENST00000637285.1

SCN1A-215, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 100 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-215ENST00000637285 ATP5G3P48201 142 aa-2.11□□□□□ -2.75
SCN1A-215ENST00000637285 DIAPH2-AS1Q14236 149 aa-2.11□□□□□ -2.75
SCN1A-215ENST00000637285 CNFNQ9BYD5 112 aa-2.11□□□□□ -2.75
SCN1A-215ENST00000637285 CST11Q9H112 138 aa-2.11□□□□□ -2.75
SCN1A-215ENST00000637285 LAMB1P07942 1786 aa-2.12□□□□□ -2.75
SCN1A-215ENST00000637285 A0A0D9SFI3 127 aa-2.12□□□□□ -2.75
SCN1A-215ENST00000637285 APODP05090 189 aa-2.12□□□□□ -2.75
SCN1A-215ENST00000637285 PHBP35232 272 aa-2.12□□□□□ -2.75
SCN1A-215ENST00000637285 HIST2H3PS2Q5TEC6 136 aa-2.12□□□□□ -2.75
SCN1A-215ENST00000637285 COPS6Q7L5N1 327 aa-2.12□□□□□ -2.75
SCN1A-215ENST00000637285 DNAJB3Q8WWF6 145 aa-2.12□□□□□ -2.75
SCN1A-215ENST00000637285 DCUN1D5Q9BTE7 237 aa-2.12□□□□□ -2.75
SCN1A-215ENST00000637285 NPCDR1Q9BY65 106 aa-2.12□□□□□ -2.75
SCN1A-215ENST00000637285 MRPL36Q9P0J6 103 aaKnown RBP-2.12□□□□□ -2.75
SCN1A-215ENST00000637285 PCNX1Q96RV3 2341 aa-2.12□□□□□ -2.75
SCN1A-215ENST00000637285 ROBO3Q96MS0 1386 aa-2.12□□□□□ -2.75
SCN1A-215ENST00000637285 FASNP49327 2511 aaKnown RBP-2.13□□□□□ -2.75
SCN1A-215ENST00000637285 EVC2Q86UK5 1308 aa-2.13□□□□□ -2.75
SCN1A-215ENST00000637285 TRPM7Q96QT4 1865 aa-2.13□□□□□ -2.75
SCN1A-215ENST00000637285 WRNQ14191 1432 aaPredicted RBP eCLIP-2.13□□□□□ -2.75
SCN1A-215ENST00000637285 TRAV26-2A0A0B4J265 109 aa-2.13□□□□□ -2.75
SCN1A-215ENST00000637285 OR4C46A6NHA9 309 aa-2.13□□□□□ -2.75
SCN1A-215ENST00000637285 H0Y980 276 aa-2.13□□□□□ -2.75
SCN1A-215ENST00000637285 APOA1P02647 267 aa-2.13□□□□□ -2.75
SCN1A-215ENST00000637285 TCRBP04435 133 aa-2.13□□□□□ -2.75
SCN1A-215ENST00000637285 RPS12P25398 132 aaKnown RBP-2.13□□□□□ -2.75
SCN1A-215ENST00000637285 CARD18P57730 90 aa-2.13□□□□□ -2.75
SCN1A-215ENST00000637285 PSME3P61289 254 aa-2.13□□□□□ -2.75
SCN1A-215ENST00000637285 BCL2L15Q5TBC7 163 aa-2.13□□□□□ -2.75
SCN1A-215ENST00000637285 SMIM11BQ8TCY0 68 aa-2.13□□□□□ -2.75
SCN1A-215ENST00000637285 SLC35B4Q969S0 331 aa-2.13□□□□□ -2.75
SCN1A-215ENST00000637285 NBPF19A0A087WUL8 3843 aa-2.13□□□□□ -2.75
SCN1A-215ENST00000637285 MYH9P35579 1960 aaKnown RBP-2.14□□□□□ -2.75
SCN1A-215ENST00000637285 IGF2P01344 180 aa-2.14□□□□□ -2.75
SCN1A-215ENST00000637285 HLA-EP13747 358 aa-2.14□□□□□ -2.75
SCN1A-215ENST00000637285 DEFA3P59666 94 aa-2.14□□□□□ -2.75
SCN1A-215ENST00000637285 H3F3AP84243 136 aa-2.14□□□□□ -2.75
SCN1A-215ENST00000637285 VMA21Q3ZAQ7 101 aa-2.14□□□□□ -2.75
SCN1A-215ENST00000637285 LYRM7Q5U5X0 104 aa-2.14□□□□□ -2.75
SCN1A-215ENST00000637285 GOLT1AQ6ZVE7 132 aa-2.14□□□□□ -2.75
SCN1A-215ENST00000637285 SLC25A40Q8TBP6 338 aa-2.14□□□□□ -2.75
SCN1A-215ENST00000637285 ENY2Q9NPA8 101 aa-2.14□□□□□ -2.75
SCN1A-215ENST00000637285 BCL9LQ86UU0 1499 aa-2.14□□□□□ -2.75
SCN1A-215ENST00000637285 TRAV22A0A0B4J277 110 aa-2.15□□□□□ -2.75
SCN1A-215ENST00000637285 TMEM213A2RRL7 107 aa-2.15□□□□□ -2.75
SCN1A-215ENST00000637285 BLVRAP53004 296 aa-2.15□□□□□ -2.75
SCN1A-215ENST00000637285 UBE2BP63146 152 aa-2.15□□□□□ -2.75
SCN1A-215ENST00000637285 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-2.15□□□□□ -2.75
SCN1A-215ENST00000637285 UBE2DNLQ8IWF7 75 aa-2.15□□□□□ -2.75
SCN1A-215ENST00000637285 C12orf45Q8N5I9 185 aaPredicted RBP-2.15□□□□□ -2.75
SCN1A-215ENST00000637285 TMEM86BQ8N661 226 aa-2.15□□□□□ -2.75
SCN1A-215ENST00000637285 RAB8BQ92930 207 aa-2.15□□□□□ -2.75
SCN1A-215ENST00000637285 LSM5Q9Y4Y9 91 aaKnown RBP-2.15□□□□□ -2.75
SCN1A-215ENST00000637285 CPDO75976 1380 aa-2.15□□□□□ -2.75
SCN1A-215ENST00000637285 SSC5DA1L4H1 1573 aa-2.15□□□□□ -2.75
SCN1A-215ENST00000637285 PLCE1Q9P212 2302 aa-2.16□□□□□ -2.75
SCN1A-215ENST00000637285 BLMP54132 1417 aaPredicted RBP-2.16□□□□□ -2.75
SCN1A-215ENST00000637285 hCG_1818297A0A087WSY0 165 aa-2.16□□□□□ -2.76
SCN1A-215ENST00000637285 A8MT66 165 aa-2.16□□□□□ -2.76
SCN1A-215ENST00000637285 TCL1AP56279 114 aa-2.16□□□□□ -2.76
SCN1A-215ENST00000637285 MLLT11Q13015 90 aaPredicted RBP-2.16□□□□□ -2.76
SCN1A-215ENST00000637285 KLRD1Q13241 179 aa-2.16□□□□□ -2.76
SCN1A-215ENST00000637285 PMS2P3Q13401 168 aa-2.16□□□□□ -2.76
SCN1A-215ENST00000637285 Q6Q795 121 aa-2.16□□□□□ -2.76
SCN1A-215ENST00000637285 GNPDA2Q8TDQ7 276 aa-2.16□□□□□ -2.76
SCN1A-215ENST00000637285 TVP23BQ9NYZ1 205 aa-2.16□□□□□ -2.76
SCN1A-215ENST00000637285 ABCC11Q96J66 1382 aa-2.16□□□□□ -2.76
SCN1A-215ENST00000637285 RREB1Q92766 1687 aa-2.16□□□□□ -2.76
SCN1A-215ENST00000637285 DNAH6Q9C0G6 4158 aa-2.16□□□□□ -2.76
SCN1A-215ENST00000637285 M0R2T5 61 aa-2.17□□□□□ -2.76
SCN1A-215ENST00000637285 LYRM1O43325 122 aa-2.17□□□□□ -2.76
SCN1A-215ENST00000637285 IDO1P14902 403 aa-2.17□□□□□ -2.76
SCN1A-215ENST00000637285 RRN3P1Q2M238 152 aa-2.17□□□□□ -2.76
SCN1A-215ENST00000637285 SPAG11AQ6PDA7 123 aa-2.17□□□□□ -2.76
SCN1A-215ENST00000637285 LINC00269Q8N2A0 174 aa-2.17□□□□□ -2.76
SCN1A-215ENST00000637285 OR4C12Q96R67 309 aa-2.17□□□□□ -2.76
SCN1A-215ENST00000637285 COA4Q9NYJ1 87 aa-2.17□□□□□ -2.76
SCN1A-215ENST00000637285 NOSIPQ9Y314 301 aaKnown RBP-2.17□□□□□ -2.76
SCN1A-215ENST00000637285 URB1O60287 2271 aaKnown RBP-2.17□□□□□ -2.76
SCN1A-215ENST00000637285 MYO7BQ6PIF6 2116 aa-2.18□□□□□ -2.76
SCN1A-215ENST00000637285 NUP98P52948 1817 aa-2.18□□□□□ -2.76
SCN1A-215ENST00000637285 FAM236DA0A1B0GTK5 79 aa-2.18□□□□□ -2.76
SCN1A-215ENST00000637285 TMEM256-PLSCR3K7ERE1 68 aa-2.18□□□□□ -2.76
SCN1A-215ENST00000637285 KPNA3O00505 521 aaPredicted RBP-2.18□□□□□ -2.76
SCN1A-215ENST00000637285 C8orf88P0DMB2 117 aa-2.18□□□□□ -2.76
SCN1A-215ENST00000637285 FAM236CP0DP71 79 aa-2.18□□□□□ -2.76
SCN1A-215ENST00000637285 DYNLT3P51808 116 aa-2.18□□□□□ -2.76
SCN1A-215ENST00000637285 EMX2Q04743 252 aa-2.18□□□□□ -2.76
SCN1A-215ENST00000637285 C1orf140Q5VVS0 124 aa-2.18□□□□□ -2.76
SCN1A-215ENST00000637285 C3orf62Q6ZUJ4 267 aa-2.18□□□□□ -2.76
SCN1A-215ENST00000637285 DRC3Q9H069 523 aa-2.18□□□□□ -2.76
SCN1A-215ENST00000637285 PRKDCP78527 4128 aaKnown RBP-2.19□□□□□ -2.76
SCN1A-215ENST00000637285 HELZP42694 1942 aaKnown RBP-2.19□□□□□ -2.76
SCN1A-215ENST00000637285 VIRMAQ69YN4 1812 aaKnown RBP-2.19□□□□□ -2.76
SCN1A-215ENST00000637285 CDK12Q9NYV4 1490 aaPredicted RBP-2.19□□□□□ -2.76
SCN1A-215ENST00000637285 TRAV17A0A0B4J275 112 aa-2.19□□□□□ -2.76
SCN1A-215ENST00000637285 SPCS3P61009 180 aa-2.19□□□□□ -2.76
SCN1A-215ENST00000637285 IMPG1Q17R60 797 aa-2.19□□□□□ -2.76
SCN1A-215ENST00000637285 Q3ZCU0 254 aa-2.19□□□□□ -2.76
SCN1A-215ENST00000637285 CT55Q8WUE5 264 aa-2.19□□□□□ -2.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms