RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 TRPT1Q86TN4 253 aaKnown RBP14.38□□□□□ -0.11
CACNA1A-227ENST00000636549 MRPS18CQ9Y3D5 142 aaKnown RBP14.38□□□□□ -0.11
CACNA1A-227ENST00000636549 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.38□□□□□ -0.11
CACNA1A-227ENST00000636549 IGKV2-29A2NJV5 120 aaPredicted RBP14.38□□□□□ -0.11
CACNA1A-227ENST00000636549 IGLL5B9A064 214 aa14.38□□□□□ -0.11
CACNA1A-227ENST00000636549 NTF4P34130 210 aa14.38□□□□□ -0.11
CACNA1A-227ENST00000636549 NDUFAF3Q9BU61 184 aa14.38□□□□□ -0.11
CACNA1A-227ENST00000636549 TET1Q8NFU7 2136 aa14.38□□□□□ -0.11
CACNA1A-227ENST00000636549 F6UB75 175 aa14.37□□□□□ -0.11
CACNA1A-227ENST00000636549 ADAMTS7Q9UKP4 1686 aa14.37□□□□□ -0.11
CACNA1A-227ENST00000636549 IGHV4-59P01825 116 aa14.37□□□□□ -0.11
CACNA1A-227ENST00000636549 C4orf48Q5BLP8 95 aa14.37□□□□□ -0.11
CACNA1A-227ENST00000636549 HEPN1Q6WQI6 88 aa14.37□□□□□ -0.11
CACNA1A-227ENST00000636549 LY6G5BQ8NDX9 201 aa14.37□□□□□ -0.11
CACNA1A-227ENST00000636549 TMEM170AQ8WVE7 144 aa14.37□□□□□ -0.11
CACNA1A-227ENST00000636549 GREB1Q4ZG55 1949 aa14.37□□□□□ -0.11
CACNA1A-227ENST00000636549 GLRX5Q86SX6 157 aa14.37□□□□□ -0.11
CACNA1A-227ENST00000636549 RNF126Q9BV68 326 aa14.37□□□□□ -0.11
CACNA1A-227ENST00000636549 DOCK4Q8N1I0 1966 aa14.37□□□□□ -0.11
CACNA1A-227ENST00000636549 NPBQ8NG41 125 aa14.36□□□□□ -0.11
CACNA1A-227ENST00000636549 NTN3O00634 580 aaPredicted RBP14.36□□□□□ -0.11
CACNA1A-227ENST00000636549 PIFOQ8TCI5 191 aa14.36□□□□□ -0.11
CACNA1A-227ENST00000636549 CHD3Q12873 2000 aaKnown RBP14.36□□□□□ -0.11
CACNA1A-227ENST00000636549 BRCA1P38398 1863 aaKnown RBP14.36□□□□□ -0.11
CACNA1A-227ENST00000636549 COL5A3P25940 1745 aaPredicted RBP14.36□□□□□ -0.11
CACNA1A-227ENST00000636549 GRNP28799 593 aaKnown RBP14.36□□□□□ -0.11
CACNA1A-227ENST00000636549 CHAC1Q9BUX1 264 aa14.36□□□□□ -0.11
CACNA1A-227ENST00000636549 HIST2H2BDQ6DRA6 164 aa14.36□□□□□ -0.11
CACNA1A-227ENST00000636549 K7ENP7 123 aa14.35□□□□□ -0.11
CACNA1A-227ENST00000636549 CCL24O00175 119 aa14.35□□□□□ -0.11
CACNA1A-227ENST00000636549 PPBPP02775 128 aa14.35□□□□□ -0.11
CACNA1A-227ENST00000636549 FBLIM1Q8WUP2 373 aa14.35□□□□□ -0.11
CACNA1A-227ENST00000636549 CITED1Q99966 193 aa14.35□□□□□ -0.11
CACNA1A-227ENST00000636549 SOCS3O14543 225 aa14.35□□□□□ -0.11
CACNA1A-227ENST00000636549 IGHG4P01861 327 aa14.35□□□□□ -0.11
CACNA1A-227ENST00000636549 CHCHD1Q96BP2 118 aaKnown RBP14.35□□□□□ -0.11
CACNA1A-227ENST00000636549 LMO1P25800 156 aa14.34□□□□□ -0.11
CACNA1A-227ENST00000636549 UBE2AP49459 152 aa14.34□□□□□ -0.11
CACNA1A-227ENST00000636549 DEFB112Q30KQ8 113 aa14.34□□□□□ -0.11
CACNA1A-227ENST00000636549 AKAP6Q13023 2319 aa14.34□□□□□ -0.11
CACNA1A-227ENST00000636549 GTSF1Q8WW33 167 aa14.34□□□□□ -0.11
CACNA1A-227ENST00000636549 NCR3O14931 201 aa14.34□□□□□ -0.11
CACNA1A-227ENST00000636549 MAJINQ3KP22 176 aa14.34□□□□□ -0.11
CACNA1A-227ENST00000636549 OSTCQ9NRP0 149 aa14.34□□□□□ -0.11
CACNA1A-227ENST00000636549 CACNA1IQ9P0X4 2223 aa14.34□□□□□ -0.11
CACNA1A-227ENST00000636549 I3L3M4 83 aa14.33□□□□□ -0.11
CACNA1A-227ENST00000636549 PROP1O75360 226 aa14.33□□□□□ -0.12
CACNA1A-227ENST00000636549 CXCL1P09341 107 aa14.33□□□□□ -0.12
CACNA1A-227ENST00000636549 KMT2EQ8IZD2 1858 aa14.33□□□□□ -0.12
CACNA1A-227ENST00000636549 FANCD2OSQ96PS1 177 aa14.33□□□□□ -0.12
CACNA1A-227ENST00000636549 SRRM5B3KS81 715 aa14.33□□□□□ -0.12
CACNA1A-227ENST00000636549 GNB1LQ9BYB4 327 aa14.33□□□□□ -0.12
CACNA1A-227ENST00000636549 COL24A1Q17RW2 1714 aa14.33□□□□□ -0.12
CACNA1A-227ENST00000636549 CD5P06127 495 aa14.33□□□□□ -0.12
CACNA1A-227ENST00000636549 WDR86Q86TI4 376 aa14.33□□□□□ -0.12
CACNA1A-227ENST00000636549 LINC00271P0C7V0 271 aa14.33□□□□□ -0.12
CACNA1A-227ENST00000636549 C5orf38Q86SI9 138 aa14.32□□□□□ -0.12
CACNA1A-227ENST00000636549 TRGV9Q99603 122 aa14.32□□□□□ -0.12
CACNA1A-227ENST00000636549 TPSG1Q9NRR2 321 aa14.32□□□□□ -0.12
CACNA1A-227ENST00000636549 IGLV3-19P01714 112 aa14.32□□□□□ -0.12
CACNA1A-227ENST00000636549 RNF222A6NCQ9 220 aa14.32□□□□□ -0.12
CACNA1A-227ENST00000636549 HSD52Q0P140 79 aa14.32□□□□□ -0.12
CACNA1A-227ENST00000636549 DIAPH2-AS1Q14236 149 aa14.32□□□□□ -0.12
CACNA1A-227ENST00000636549 C14orf132Q9NPU4 83 aa14.32□□□□□ -0.12
CACNA1A-227ENST00000636549 TRACP01848 142 aa14.32□□□□□ -0.12
CACNA1A-227ENST00000636549 NBL1P41271 181 aa14.32□□□□□ -0.12
CACNA1A-227ENST00000636549 NYNRINQ9P2P1 1898 aaKnown RBP14.31□□□□□ -0.12
CACNA1A-227ENST00000636549 IGHV2-70DA0A0C4DH43 119 aa14.31□□□□□ -0.12
CACNA1A-227ENST00000636549 IGFBP3P17936 291 aaPredicted RBP14.31□□□□□ -0.12
CACNA1A-227ENST00000636549 RNF138Q8WVD3 245 aa14.31□□□□□ -0.12
CACNA1A-227ENST00000636549 HS3ST6Q96QI5 342 aa14.31□□□□□ -0.12
CACNA1A-227ENST00000636549 RNF183Q96D59 192 aa14.31□□□□□ -0.12
CACNA1A-227ENST00000636549 AGMATQ9BSE5 352 aa14.31□□□□□ -0.12
CACNA1A-227ENST00000636549 LRRC37AA6NMS7 1700 aa14.31□□□□□ -0.12
CACNA1A-227ENST00000636549 K7EMI3 77 aa14.31□□□□□ -0.12
CACNA1A-227ENST00000636549 WNK3Q9BYP7 1800 aa14.3□□□□□ -0.12
CACNA1A-227ENST00000636549 IGHV1OR15-1A0A075B7D0 117 aa14.3□□□□□ -0.12
CACNA1A-227ENST00000636549 ZC2HC1BQ5TFG8 222 aa14.3□□□□□ -0.12
CACNA1A-227ENST00000636549 LAIR2Q6ISS4 152 aa14.3□□□□□ -0.12
CACNA1A-227ENST00000636549 HLA-DMBP28068 263 aa14.3□□□□□ -0.12
CACNA1A-227ENST00000636549 U3KQE9 123 aa14.3□□□□□ -0.12
CACNA1A-227ENST00000636549 KIAA2026Q5HYC2 2103 aa14.3□□□□□ -0.12
CACNA1A-227ENST00000636549 SEM1Q6ZVN7 128 aa14.3□□□□□ -0.12
CACNA1A-227ENST00000636549 WIPF3A6NGB9 483 aa14.3□□□□□ -0.12
CACNA1A-227ENST00000636549 KIR3DS1Q14943 382 aa14.3□□□□□ -0.12
CACNA1A-227ENST00000636549 CD200R1LQ6Q8B3 271 aa14.3□□□□□ -0.12
CACNA1A-227ENST00000636549 TSSC4Q9Y5U2 329 aaPredicted RBP14.3□□□□□ -0.12
CACNA1A-227ENST00000636549 ID3Q02535 119 aa14.29□□□□□ -0.12
CACNA1A-227ENST00000636549 GNRH2O43555 120 aa14.29□□□□□ -0.12
CACNA1A-227ENST00000636549 A0A1W2PPI3 338 aa14.29□□□□□ -0.12
CACNA1A-227ENST00000636549 PHF3Q92576 2039 aaKnown RBP14.28□□□□□ -0.12
CACNA1A-227ENST00000636549 IGHV4OR15-8A0A075B7B6 117 aa14.28□□□□□ -0.12
CACNA1A-227ENST00000636549 A0A087WW49 117 aa14.28□□□□□ -0.12
CACNA1A-227ENST00000636549 GP9P14770 177 aa14.28□□□□□ -0.12
CACNA1A-227ENST00000636549 NEUROG3Q9Y4Z2 214 aa14.28□□□□□ -0.12
CACNA1A-227ENST00000636549 ETDCA0A1B0GVM5 59 aa14.28□□□□□ -0.12
CACNA1A-227ENST00000636549 CCL18P55774 89 aa14.28□□□□□ -0.12
CACNA1A-227ENST00000636549 C1orf43Q9BWL3 253 aa14.28□□□□□ -0.12
CACNA1A-227ENST00000636549 DOCK9Q9BZ29 2069 aa14.28□□□□□ -0.12
CACNA1A-227ENST00000636549 SRSF2Q01130 221 aaKnown RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms