RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 TSPOP30536 169 aa11.28□□□□□ -0.6
LINC00339-207ENST00000634712 PDE6HQ13956 83 aa11.28□□□□□ -0.6
LINC00339-207ENST00000634712 Q6ZTC4 211 aa11.28□□□□□ -0.6
LINC00339-207ENST00000634712 BAP18Q8IXM2 172 aa11.28□□□□□ -0.6
LINC00339-207ENST00000634712 ASB13Q8WXK3 278 aa11.28□□□□□ -0.6
LINC00339-207ENST00000634712 SLC25A2Q9BXI2 301 aa11.28□□□□□ -0.6
LINC00339-207ENST00000634712 OR51M1Q9H341 326 aa11.28□□□□□ -0.6
LINC00339-207ENST00000634712 AAMDCQ9H7C9 122 aa11.28□□□□□ -0.6
LINC00339-207ENST00000634712 CELA1Q9UNI1 258 aa11.28□□□□□ -0.6
LINC00339-207ENST00000634712 FUT9Q9Y231 359 aa11.28□□□□□ -0.6
LINC00339-207ENST00000634712 PRELID1Q9Y255 219 aa11.28□□□□□ -0.6
LINC00339-207ENST00000634712 TEX48A0A1B0GUV7 120 aa11.28□□□□□ -0.6
LINC00339-207ENST00000634712 IGLL5B9A064 214 aa11.28□□□□□ -0.6
LINC00339-207ENST00000634712 PRAC2D3DTV9 90 aa11.28□□□□□ -0.6
LINC00339-207ENST00000634712 CRXO43186 299 aaPredicted RBP11.28□□□□□ -0.6
LINC00339-207ENST00000634712 GIPP09681 153 aaPredicted RBP11.28□□□□□ -0.6
LINC00339-207ENST00000634712 CDKN1BP46527 198 aa11.28□□□□□ -0.6
LINC00339-207ENST00000634712 ZNF767PQ75MW2 155 aa11.28□□□□□ -0.6
LINC00339-207ENST00000634712 LINC01587Q99440 93 aa11.28□□□□□ -0.6
LINC00339-207ENST00000634712 PAXXQ9BUH6 204 aa11.28□□□□□ -0.6
LINC00339-207ENST00000634712 PARD6GQ9BYG4 376 aaPredicted RBP11.28□□□□□ -0.6
LINC00339-207ENST00000634712 PLECQ15149 4684 aaKnown RBP11.27□□□□□ -0.61
LINC00339-207ENST00000634712 OR7C2O60412 319 aa11.27□□□□□ -0.61
LINC00339-207ENST00000634712 NBEAP1P0C6P0 100 aa11.27□□□□□ -0.61
LINC00339-207ENST00000634712 C12orf74Q32Q52 190 aa11.27□□□□□ -0.61
LINC00339-207ENST00000634712 TMEM256Q8N2U0 113 aa11.27□□□□□ -0.61
LINC00339-207ENST00000634712 RPP25LQ8N5L8 163 aaKnown RBP11.27□□□□□ -0.61
LINC00339-207ENST00000634712 LINC00476Q8WZB0 136 aa11.27□□□□□ -0.61
LINC00339-207ENST00000634712 MRPL53Q96EL3 112 aaKnown RBP11.27□□□□□ -0.61
LINC00339-207ENST00000634712 WFDC1Q9HC57 220 aa11.27□□□□□ -0.61
LINC00339-207ENST00000634712 ZNF705GA8MUZ8 300 aaPredicted RBP11.26□□□□□ -0.61
LINC00339-207ENST00000634712 TCTAP57738 103 aa11.26□□□□□ -0.61
LINC00339-207ENST00000634712 TAS2R45P59539 299 aa11.26□□□□□ -0.61
LINC00339-207ENST00000634712 ZNF266Q14584 549 aa11.26□□□□□ -0.61
LINC00339-207ENST00000634712 ACOT6Q3I5F7 207 aaPredicted RBP11.26□□□□□ -0.61
LINC00339-207ENST00000634712 INO80EQ8NBZ0 244 aaPredicted RBP11.26□□□□□ -0.61
LINC00339-207ENST00000634712 RNF141Q8WVD5 230 aa11.26□□□□□ -0.61
LINC00339-207ENST00000634712 FAM167A-AS1Q96KT0 104 aa11.26□□□□□ -0.61
LINC00339-207ENST00000634712 DEFB131BA0A096LNP1 70 aa11.25□□□□□ -0.61
LINC00339-207ENST00000634712 A0A1W2PPV4 95 aa11.25□□□□□ -0.61
LINC00339-207ENST00000634712 NDUFB4O95168 129 aa11.25□□□□□ -0.61
LINC00339-207ENST00000634712 OR10J4P0C629 311 aa11.25□□□□□ -0.61
LINC00339-207ENST00000634712 HTN1P15515 57 aa11.25□□□□□ -0.61
LINC00339-207ENST00000634712 LEPP41159 167 aa11.25□□□□□ -0.61
LINC00339-207ENST00000634712 FAM222AQ5U5X8 452 aa11.25□□□□□ -0.61
LINC00339-207ENST00000634712 EXOC3-AS1Q8N2X6 119 aa11.25□□□□□ -0.61
LINC00339-207ENST00000634712 AQP10Q96PS8 301 aa11.25□□□□□ -0.61
LINC00339-207ENST00000634712 NIPSNAP3BQ9BS92 247 aa11.25□□□□□ -0.61
LINC00339-207ENST00000634712 DKK2Q9UBU2 259 aa11.25□□□□□ -0.61
LINC00339-207ENST00000634712 YTHDF2Q9Y5A9 579 aaKnown RBP11.25□□□□□ -0.61
LINC00339-207ENST00000634712 M0R3E3 92 aa11.24□□□□□ -0.61
LINC00339-207ENST00000634712 ICAM4Q14773 271 aa11.24□□□□□ -0.61
LINC00339-207ENST00000634712 OXA1LQ15070 435 aa11.24□□□□□ -0.61
LINC00339-207ENST00000634712 KHDC3LQ587J8 217 aa11.24□□□□□ -0.61
LINC00339-207ENST00000634712 RYR2Q92736 4967 aa11.23□□□□□ -0.61
LINC00339-207ENST00000634712 FXYD6-FXYD2A0A087WZ82 144 aa11.23□□□□□ -0.61
LINC00339-207ENST00000634712 NPIPB6E9PJ23 425 aa11.23□□□□□ -0.61
LINC00339-207ENST00000634712 J3KRW8 73 aa11.23□□□□□ -0.61
LINC00339-207ENST00000634712 M6PRP20645 277 aa11.23□□□□□ -0.61
LINC00339-207ENST00000634712 TAS2R60P59551 318 aa11.23□□□□□ -0.61
LINC00339-207ENST00000634712 UBE2L3P68036 154 aaKnown RBP11.23□□□□□ -0.61
LINC00339-207ENST00000634712 Q5BKY6 102 aa11.23□□□□□ -0.61
LINC00339-207ENST00000634712 FAM122CQ6P4D5 195 aa11.23□□□□□ -0.61
LINC00339-207ENST00000634712 OR2T35Q8NGX2 323 aa11.23□□□□□ -0.61
LINC00339-207ENST00000634712 FXYD5Q96DB9 178 aa11.23□□□□□ -0.61
LINC00339-207ENST00000634712 LINC00477Q96M19 166 aa11.23□□□□□ -0.61
LINC00339-207ENST00000634712 C20orf144Q9BQM9 153 aa11.23□□□□□ -0.61
LINC00339-207ENST00000634712 H7BYZ3 331 aa11.22□□□□□ -0.61
LINC00339-207ENST00000634712 PRM2P04554 102 aa11.22□□□□□ -0.61
LINC00339-207ENST00000634712 CT45A10P0DMU9 189 aa11.22□□□□□ -0.61
LINC00339-207ENST00000634712 CSN1S1P47710 185 aa11.22□□□□□ -0.61
LINC00339-207ENST00000634712 DAD1P61803 113 aa11.22□□□□□ -0.61
LINC00339-207ENST00000634712 RANP62826 216 aaKnown RBP11.22□□□□□ -0.61
LINC00339-207ENST00000634712 ERCC8Q13216 396 aa11.22□□□□□ -0.61
LINC00339-207ENST00000634712 HSD17B11Q8NBQ5 300 aa11.22□□□□□ -0.61
LINC00339-207ENST00000634712 ODF3Q96PU9 254 aa11.22□□□□□ -0.61
LINC00339-207ENST00000634712 ALMS1Q8TCU4 4167 aa11.22□□□□□ -0.61
LINC00339-207ENST00000634712 TMEM78Q5T7P6 136 aa11.21□□□□□ -0.61
LINC00339-207ENST00000634712 LGALS9CQ6DKI2 356 aa11.21□□□□□ -0.61
LINC00339-207ENST00000634712 CCDC28AQ8IWP9 274 aa11.21□□□□□ -0.61
LINC00339-207ENST00000634712 LYPD1Q8N2G4 141 aa11.21□□□□□ -0.61
LINC00339-207ENST00000634712 OR10G4Q8NGN3 311 aa11.21□□□□□ -0.61
LINC00339-207ENST00000634712 OR10G9Q8NGN4 311 aa11.21□□□□□ -0.61
LINC00339-207ENST00000634712 OR10G7Q8NGN6 311 aa11.21□□□□□ -0.61
LINC00339-207ENST00000634712 PLA2G2EQ9NZK7 142 aa11.21□□□□□ -0.61
LINC00339-207ENST00000634712 IGHV4-4A0A075B6R2 117 aa11.2□□□□□ -0.62
LINC00339-207ENST00000634712 LYRM9A8MSI8 78 aa11.2□□□□□ -0.62
LINC00339-207ENST00000634712 AZU1P20160 251 aa11.2□□□□□ -0.62
LINC00339-207ENST00000634712 KIR3DS1Q14943 382 aa11.2□□□□□ -0.62
LINC00339-207ENST00000634712 GFI1BQ5VTD9 330 aa11.2□□□□□ -0.62
LINC00339-207ENST00000634712 PHYHIPLQ96FC7 376 aa11.2□□□□□ -0.62
LINC00339-207ENST00000634712 C16orf74Q96GX8 76 aa11.2□□□□□ -0.62
LINC00339-207ENST00000634712 APLNQ9ULZ1 77 aa11.2□□□□□ -0.62
LINC00339-207ENST00000634712 DNAH1Q9P2D7 4330 aa11.2□□□□□ -0.62
LINC00339-207ENST00000634712 BORCS7-ASMTA0A0B4J1R7 106 aa11.19□□□□□ -0.62
LINC00339-207ENST00000634712 TRAV12-3A0A0B4J271 114 aa11.19□□□□□ -0.62
LINC00339-207ENST00000634712 MBP02144 154 aa11.19□□□□□ -0.62
LINC00339-207ENST00000634712 SLC25A5P05141 298 aaKnown RBP11.19□□□□□ -0.62
LINC00339-207ENST00000634712 HTN3P15516 51 aa11.19□□□□□ -0.62
LINC00339-207ENST00000634712 RAB2AP61019 212 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms