RNA–Protein interactions for RNA: ENST00000631321.1

LINC00540-203, long intergenic non-protein coding RNA 540, humanhuman

TSL 2 BASIC

Gene LINC00540, Length 2,412 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00540-203ENST00000631321 Q8N9W7 124 aa9.94□□□□□ -0.82
LINC00540-203ENST00000631321 ZNF747Q9BV97 191 aa9.94□□□□□ -0.82
LINC00540-203ENST00000631321 IGHG4P01861 327 aa9.94□□□□□ -0.82
LINC00540-203ENST00000631321 S100A7P31151 101 aa9.94□□□□□ -0.82
LINC00540-203ENST00000631321 RPS20P60866 119 aaKnown RBP9.94□□□□□ -0.82
LINC00540-203ENST00000631321 SRSF2Q01130 221 aaKnown RBP9.94□□□□□ -0.82
LINC00540-203ENST00000631321 FA2HQ7L5A8 372 aa9.94□□□□□ -0.82
LINC00540-203ENST00000631321 OR10AG1Q8NH19 301 aa9.94□□□□□ -0.82
LINC00540-203ENST00000631321 TPPP3Q9BW30 176 aa9.94□□□□□ -0.82
LINC00540-203ENST00000631321 SCRT2Q9NQ03 307 aa9.94□□□□□ -0.82
LINC00540-203ENST00000631321 ARHGAP32A7KAX9 2087 aa9.93□□□□□ -0.82
LINC00540-203ENST00000631321 HSBP1L1C9JCN9 74 aa9.93□□□□□ -0.82
LINC00540-203ENST00000631321 IGHV3-23P01764 117 aa9.93□□□□□ -0.82
LINC00540-203ENST00000631321 RELQ04864 619 aaPredicted RBP9.93□□□□□ -0.82
LINC00540-203ENST00000631321 SLC25A34Q6PIV7 304 aa9.93□□□□□ -0.82
LINC00540-203ENST00000631321 COX11Q9Y6N1 276 aa9.93□□□□□ -0.82
LINC00540-203ENST00000631321 TMEM213A2RRL7 107 aa9.93□□□□□ -0.82
LINC00540-203ENST00000631321 PRSS3P2Q8NHM4 247 aa9.93□□□□□ -0.82
LINC00540-203ENST00000631321 FAM110DQ8TAY7 271 aaPredicted RBP9.93□□□□□ -0.82
LINC00540-203ENST00000631321 AJUBAQ96IF1 538 aa9.93□□□□□ -0.82
LINC00540-203ENST00000631321 PSMG3-AS1Q96PY0 264 aa9.93□□□□□ -0.82
LINC00540-203ENST00000631321 TACC2O95359 2948 aa9.92□□□□□ -0.82
LINC00540-203ENST00000631321 DCHS2Q6V1P9 2916 aa9.92□□□□□ -0.82
LINC00540-203ENST00000631321 FAM106CPP0CH98 169 aa9.92□□□□□ -0.82
LINC00540-203ENST00000631321 BMI1P35226 326 aa9.92□□□□□ -0.82
LINC00540-203ENST00000631321 UNQ5815/PRO19632Q6UWF5 114 aa9.92□□□□□ -0.82
LINC00540-203ENST00000631321 ZNF502Q8TBZ5 544 aa9.92□□□□□ -0.82
LINC00540-203ENST00000631321 A0A087X0K7 114 aa9.92□□□□□ -0.82
LINC00540-203ENST00000631321 A0A096LNJ9 63 aa9.92□□□□□ -0.82
LINC00540-203ENST00000631321 D6R8Y8 96 aa9.92□□□□□ -0.82
LINC00540-203ENST00000631321 IGLC6P0CF74 106 aa9.92□□□□□ -0.82
LINC00540-203ENST00000631321 ZNF575Q86XF7 245 aa9.92□□□□□ -0.82
LINC00540-203ENST00000631321 VGLL1Q99990 258 aa9.92□□□□□ -0.82
LINC00540-203ENST00000631321 RAXQ9Y2V3 346 aa9.92□□□□□ -0.82
LINC00540-203ENST00000631321 TMSB15BA0A087X1C1 80 aa9.91□□□□□ -0.82
LINC00540-203ENST00000631321 IFI27P40305 119 aaPredicted RBP9.91□□□□□ -0.82
LINC00540-203ENST00000631321 UBE2E1P51965 193 aa9.91□□□□□ -0.82
LINC00540-203ENST00000631321 ORMDL3Q8N138 153 aa9.91□□□□□ -0.82
LINC00540-203ENST00000631321 PRELID3AQ96N28 172 aa9.91□□□□□ -0.82
LINC00540-203ENST00000631321 SIGLEC8Q9NYZ4 499 aa9.91□□□□□ -0.82
LINC00540-203ENST00000631321 IGHV2-70DA0A0C4DH43 119 aa9.91□□□□□ -0.82
LINC00540-203ENST00000631321 ZNF80P51504 273 aaPredicted RBP9.91□□□□□ -0.82
LINC00540-203ENST00000631321 MRPL51Q4U2R6 128 aaKnown RBP9.91□□□□□ -0.82
LINC00540-203ENST00000631321 AMN1Q8IY45 258 aa9.91□□□□□ -0.82
LINC00540-203ENST00000631321 ZNF738Q8NE65 137 aa9.91□□□□□ -0.82
LINC00540-203ENST00000631321 LRBAP50851 2863 aa9.9□□□□□ -0.82
LINC00540-203ENST00000631321 A0A1W2PPR1 153 aa9.9□□□□□ -0.82
LINC00540-203ENST00000631321 RAB9AP51151 201 aa9.9□□□□□ -0.82
LINC00540-203ENST00000631321 PAX8Q06710 450 aa9.9□□□□□ -0.82
LINC00540-203ENST00000631321 FER1L6-AS1Q8NA97 138 aa9.9□□□□□ -0.82
LINC00540-203ENST00000631321 MCRIP2Q9BUT9 160 aaKnown RBP9.9□□□□□ -0.82
LINC00540-203ENST00000631321 ZFAND3Q9H8U3 227 aa9.9□□□□□ -0.82
LINC00540-203ENST00000631321 PPP1R14DQ9NXH3 145 aa9.9□□□□□ -0.82
LINC00540-203ENST00000631321 TP73-AS1Q9UF72 201 aa9.9□□□□□ -0.82
LINC00540-203ENST00000631321 LOXL1Q08397 574 aaPredicted RBP9.9□□□□□ -0.83
LINC00540-203ENST00000631321 FAM106AQ4KMX7 169 aa9.9□□□□□ -0.83
LINC00540-203ENST00000631321 Q8TAT8 98 aa9.9□□□□□ -0.83
LINC00540-203ENST00000631321 DPF1Q92782 380 aa9.9□□□□□ -0.83
LINC00540-203ENST00000631321 CNFNQ9BYD5 112 aa9.9□□□□□ -0.83
LINC00540-203ENST00000631321 NCR2O95944 276 aa9.89□□□□□ -0.83
LINC00540-203ENST00000631321 C15orf32Q32M92 178 aa9.89□□□□□ -0.83
LINC00540-203ENST00000631321 MPV17L2Q567V2 206 aa9.89□□□□□ -0.83
LINC00540-203ENST00000631321 HRNRQ86YZ3 2850 aaPredicted RBP9.89□□□□□ -0.83
LINC00540-203ENST00000631321 RBAKDNA6NC62 111 aa9.88□□□□□ -0.83
LINC00540-203ENST00000631321 TCF21O43680 179 aa9.88□□□□□ -0.83
LINC00540-203ENST00000631321 HLA-DMBP28068 263 aa9.88□□□□□ -0.83
LINC00540-203ENST00000631321 UBE2V1Q13404 147 aa9.88□□□□□ -0.83
LINC00540-203ENST00000631321 BVES-AS1Q5T3Y7 98 aa9.88□□□□□ -0.83
LINC00540-203ENST00000631321 PMCHL2Q9BQD1 86 aa9.88□□□□□ -0.83
LINC00540-203ENST00000631321 NPFFR1Q9GZQ6 430 aa9.88□□□□□ -0.83
LINC00540-203ENST00000631321 CCL25O15444 150 aa9.88□□□□□ -0.83
LINC00540-203ENST00000631321 BUB3O43684 328 aa9.88□□□□□ -0.83
LINC00540-203ENST00000631321 COX8AP10176 69 aa9.88□□□□□ -0.83
LINC00540-203ENST00000631321 GPR183P32249 361 aa9.88□□□□□ -0.83
LINC00540-203ENST00000631321 IGFL4Q6B9Z1 124 aa9.88□□□□□ -0.83
LINC00540-203ENST00000631321 C12orf54Q6X4T0 127 aa9.88□□□□□ -0.83
LINC00540-203ENST00000631321 H0Y8G0 127 aa9.87□□□□□ -0.83
LINC00540-203ENST00000631321 NDUFS7O75251 213 aa9.87□□□□□ -0.83
LINC00540-203ENST00000631321 NUDT3O95989 172 aa9.87□□□□□ -0.83
LINC00540-203ENST00000631321 RHOGP84095 191 aa9.87□□□□□ -0.83
LINC00540-203ENST00000631321 LGALS9BQ3B8N2 356 aa9.87□□□□□ -0.83
LINC00540-203ENST00000631321 LGALS9CQ6DKI2 356 aa9.87□□□□□ -0.83
LINC00540-203ENST00000631321 Q6ZVH6 145 aa9.87□□□□□ -0.83
LINC00540-203ENST00000631321 RELNP78509 3460 aa9.87□□□□□ -0.83
LINC00540-203ENST00000631321 LOC389332A0A1B0GUA5 103 aa9.87□□□□□ -0.83
LINC00540-203ENST00000631321 CLPSL1A2RUU4 121 aa9.87□□□□□ -0.83
LINC00540-203ENST00000631321 FABP5P3A8MUU1 101 aa9.87□□□□□ -0.83
LINC00540-203ENST00000631321 ATP6V0E1O15342 81 aa9.87□□□□□ -0.83
LINC00540-203ENST00000631321 CLEC3BP05452 202 aa9.87□□□□□ -0.83
LINC00540-203ENST00000631321 HIST1H1AQ02539 215 aaPredicted RBP9.87□□□□□ -0.83
LINC00540-203ENST00000631321 LINC01559Q495D7 138 aa9.87□□□□□ -0.83
LINC00540-203ENST00000631321 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.87□□□□□ -0.83
LINC00540-203ENST00000631321 PIP4P2Q8N4L2 257 aa9.87□□□□□ -0.83
LINC00540-203ENST00000631321 TIMM8BQ9Y5J9 83 aaPredicted RBP9.87□□□□□ -0.83
LINC00540-203ENST00000631321 LINC01546A6NGU7 62 aa9.86□□□□□ -0.83
LINC00540-203ENST00000631321 EFNA4P52798 201 aa9.86□□□□□ -0.83
LINC00540-203ENST00000631321 PTTG1IPP53801 180 aa9.86□□□□□ -0.83
LINC00540-203ENST00000631321 TWIST1Q15672 202 aa9.86□□□□□ -0.83
LINC00540-203ENST00000631321 CCDC140Q96MF4 163 aa9.86□□□□□ -0.83
LINC00540-203ENST00000631321 SLC50A1Q9BRV3 221 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 285.9 ms