RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 LINC01553A4QN01 128 aa3.11□□□□□ -1.91
R3HDM1-220ENST00000628915 LAGE3Q14657 143 aa3.11□□□□□ -1.91
R3HDM1-220ENST00000628915 NUP210LQ5VU65 1888 aa3.11□□□□□ -1.91
R3HDM1-220ENST00000628915 MIC13Q5XKP0 118 aa3.11□□□□□ -1.91
R3HDM1-220ENST00000628915 PCSK4Q6UW60 755 aa3.11□□□□□ -1.91
R3HDM1-220ENST00000628915 ZNF441Q8N8Z8 693 aa3.11□□□□□ -1.91
R3HDM1-220ENST00000628915 SHANK2-AS3Q9BTD1 123 aa3.11□□□□□ -1.91
R3HDM1-220ENST00000628915 TRAV41A0A0B4J266 112 aa3.1□□□□□ -1.91
R3HDM1-220ENST00000628915 C11orf94C9JXX5 98 aa3.1□□□□□ -1.91
R3HDM1-220ENST00000628915 PGLYRP1O75594 196 aaPredicted RBP3.1□□□□□ -1.91
R3HDM1-220ENST00000628915 TCL1BO95988 128 aa3.1□□□□□ -1.91
R3HDM1-220ENST00000628915 CRYGAP11844 174 aa3.1□□□□□ -1.91
R3HDM1-220ENST00000628915 LINC00310P59036 64 aa3.1□□□□□ -1.91
R3HDM1-220ENST00000628915 LGALS9CQ6DKI2 356 aa3.1□□□□□ -1.91
R3HDM1-220ENST00000628915 CLEC19AQ6UXS0 136 aa3.1□□□□□ -1.91
R3HDM1-220ENST00000628915 TSKUQ8WUA8 353 aa3.1□□□□□ -1.91
R3HDM1-220ENST00000628915 FER1L5A0AVI2 2057 aa3.1□□□□□ -1.91
R3HDM1-220ENST00000628915 A0A0A6YYD4 124 aa3.1□□□□□ -1.91
R3HDM1-220ENST00000628915 OXTP01178 125 aa3.1□□□□□ -1.91
R3HDM1-220ENST00000628915 HMGA1P17096 107 aaKnown RBP3.1□□□□□ -1.91
R3HDM1-220ENST00000628915 GCHFRP30047 84 aa3.1□□□□□ -1.91
R3HDM1-220ENST00000628915 FXYD4P59646 89 aa3.1□□□□□ -1.91
R3HDM1-220ENST00000628915 RPL30P62888 115 aaKnown RBP3.1□□□□□ -1.91
R3HDM1-220ENST00000628915 FAM182BQ5T319 152 aa3.1□□□□□ -1.91
R3HDM1-220ENST00000628915 Q6ZS92 163 aa3.1□□□□□ -1.91
R3HDM1-220ENST00000628915 WDR86Q86TI4 376 aa3.1□□□□□ -1.91
R3HDM1-220ENST00000628915 TAF15Q92804 592 aaKnown RBP eCLIP3.1□□□□□ -1.91
R3HDM1-220ENST00000628915 NABP2Q9BQ15 211 aa3.1□□□□□ -1.91
R3HDM1-220ENST00000628915 SCRT2Q9NQ03 307 aa3.1□□□□□ -1.91
R3HDM1-220ENST00000628915 SPAG17Q6Q759 2223 aa3.1□□□□□ -1.91
R3HDM1-220ENST00000628915 HCFC1P51610 2035 aa3.1□□□□□ -1.91
R3HDM1-220ENST00000628915 TRAV8-3A0A0A6YYJ7 113 aa3.1□□□□□ -1.91
R3HDM1-220ENST00000628915 H3BMM0 161 aa3.1□□□□□ -1.91
R3HDM1-220ENST00000628915 TMEM256-PLSCR3K7ERE1 68 aa3.1□□□□□ -1.91
R3HDM1-220ENST00000628915 BGLAPP02818 100 aa3.1□□□□□ -1.91
R3HDM1-220ENST00000628915 CKS2P33552 79 aa3.1□□□□□ -1.91
R3HDM1-220ENST00000628915 RPS27P42677 84 aaKnown RBP3.1□□□□□ -1.91
R3HDM1-220ENST00000628915 CCL8P80075 99 aa3.1□□□□□ -1.91
R3HDM1-220ENST00000628915 RPL18Q07020 188 aaKnown RBP3.1□□□□□ -1.91
R3HDM1-220ENST00000628915 ZNF726P1Q15940 193 aa3.1□□□□□ -1.91
R3HDM1-220ENST00000628915 ZC2HC1BQ5TFG8 222 aa3.1□□□□□ -1.91
R3HDM1-220ENST00000628915 Q5XG85 94 aa3.1□□□□□ -1.91
R3HDM1-220ENST00000628915 FAM57BQ71RH2 274 aa3.1□□□□□ -1.91
R3HDM1-220ENST00000628915 COX8CQ7Z4L0 72 aa3.1□□□□□ -1.91
R3HDM1-220ENST00000628915 SRSF12Q8WXF0 261 aaKnown RBP3.1□□□□□ -1.91
R3HDM1-220ENST00000628915 UBE2WQ96B02 151 aa3.1□□□□□ -1.91
R3HDM1-220ENST00000628915 RNF7Q9UBF6 113 aa3.1□□□□□ -1.91
R3HDM1-220ENST00000628915 NUP210Q8TEM1 1887 aaPredicted RBP3.1□□□□□ -1.91
R3HDM1-220ENST00000628915 DCHS2Q6V1P9 2916 aa3.1□□□□□ -1.91
R3HDM1-220ENST00000628915 IGKV1D-16P01601 117 aa3.1□□□□□ -1.91
R3HDM1-220ENST00000628915 MARCH3Q86UD3 253 aa3.1□□□□□ -1.91
R3HDM1-220ENST00000628915 OR5AS1Q8N127 324 aa3.1□□□□□ -1.91
R3HDM1-220ENST00000628915 NTN5Q8WTR8 489 aaPredicted RBP3.1□□□□□ -1.91
R3HDM1-220ENST00000628915 FAM19A4Q96LR4 140 aa3.1□□□□□ -1.91
R3HDM1-220ENST00000628915 GPHA2Q96T91 129 aa3.1□□□□□ -1.91
R3HDM1-220ENST00000628915 R3HDMLQ9H3Y0 253 aa3.1□□□□□ -1.91
R3HDM1-220ENST00000628915 LY96Q9Y6Y9 160 aa3.1□□□□□ -1.91
R3HDM1-220ENST00000628915 PRRC2BQ5JSZ5 2229 aaKnown RBP3.09□□□□□ -1.91
R3HDM1-220ENST00000628915 ASH1LQ9NR48 2969 aaKnown RBP3.09□□□□□ -1.91
R3HDM1-220ENST00000628915 TRBV19A0A075B6N1 114 aa3.09□□□□□ -1.91
R3HDM1-220ENST00000628915 E9PLD3 99 aa3.09□□□□□ -1.91
R3HDM1-220ENST00000628915 SLC25A20O43772 301 aa3.09□□□□□ -1.91
R3HDM1-220ENST00000628915 SRSF10O75494 262 aaKnown RBP3.09□□□□□ -1.91
R3HDM1-220ENST00000628915 C20orf204Q6ZNR8 217 aa3.09□□□□□ -1.91
R3HDM1-220ENST00000628915 NPCDR1Q9BY65 106 aa3.09□□□□□ -1.91
R3HDM1-220ENST00000628915 Q9H8V8 135 aa3.09□□□□□ -1.91
R3HDM1-220ENST00000628915 OVOL3O00110 214 aa3.09□□□□□ -1.91
R3HDM1-220ENST00000628915 PSPNO60542 156 aa3.09□□□□□ -1.91
R3HDM1-220ENST00000628915 MPV17P39210 176 aa3.09□□□□□ -1.91
R3HDM1-220ENST00000628915 RBMY1FQ15415 496 aaKnown RBP3.09□□□□□ -1.91
R3HDM1-220ENST00000628915 PAPPA-AS1Q5QFB9 102 aa3.09□□□□□ -1.91
R3HDM1-220ENST00000628915 TMEM75Q8N9X5 138 aa3.09□□□□□ -1.91
R3HDM1-220ENST00000628915 SPTSSBQ8NFR3 76 aa3.09□□□□□ -1.91
R3HDM1-220ENST00000628915 MYOZ3Q8TDC0 251 aa3.09□□□□□ -1.91
R3HDM1-220ENST00000628915 Q9H3A6 140 aa3.09□□□□□ -1.91
R3HDM1-220ENST00000628915 NLRC5Q86WI3 1866 aa3.09□□□□□ -1.91
R3HDM1-220ENST00000628915 TRIP12Q14669 1992 aaPredicted RBP3.09□□□□□ -1.91
R3HDM1-220ENST00000628915 ITPR1Q14643 2758 aa3.09□□□□□ -1.92
R3HDM1-220ENST00000628915 SCN3AQ9NY46 2000 aa3.09□□□□□ -1.92
R3HDM1-220ENST00000628915 INS-IGF2F8WCM5 200 aa3.09□□□□□ -1.92
R3HDM1-220ENST00000628915 CGAP01215 116 aa3.09□□□□□ -1.92
R3HDM1-220ENST00000628915 RFPL3SP0C7P2 107 aa3.09□□□□□ -1.92
R3HDM1-220ENST00000628915 FUSP35637 526 aaKnown RBP eCLIP3.09□□□□□ -1.92
R3HDM1-220ENST00000628915 ZNF525Q8N782 197 aa3.09□□□□□ -1.92
R3HDM1-220ENST00000628915 ZNF503Q96F45 646 aa3.09□□□□□ -1.92
R3HDM1-220ENST00000628915 LYZL4Q96KX0 146 aa3.09□□□□□ -1.92
R3HDM1-220ENST00000628915 CHAC1Q9BUX1 264 aa3.09□□□□□ -1.92
R3HDM1-220ENST00000628915 DYNLRB1Q9NP97 96 aa3.09□□□□□ -1.92
R3HDM1-220ENST00000628915 DENND4CQ5VZ89 1909 aa3.09□□□□□ -1.92
R3HDM1-220ENST00000628915 K7ESM1 405 aa3.08□□□□□ -1.92
R3HDM1-220ENST00000628915 TRIAP1O43715 76 aa3.08□□□□□ -1.92
R3HDM1-220ENST00000628915 APOHP02749 345 aaPredicted RBP3.08□□□□□ -1.92
R3HDM1-220ENST00000628915 CCL1P22362 96 aa3.08□□□□□ -1.92
R3HDM1-220ENST00000628915 LORP23490 312 aaPredicted RBP3.08□□□□□ -1.92
R3HDM1-220ENST00000628915 IGFBP7Q16270 282 aa3.08□□□□□ -1.92
R3HDM1-220ENST00000628915 MORN5Q5VZ52 161 aa3.08□□□□□ -1.92
R3HDM1-220ENST00000628915 C9orf139Q6ZV77 190 aa3.08□□□□□ -1.92
R3HDM1-220ENST00000628915 MBD6Q96DN6 1003 aa3.08□□□□□ -1.92
R3HDM1-220ENST00000628915 PSENENQ9NZ42 101 aa3.08□□□□□ -1.92
R3HDM1-220ENST00000628915 CUL9Q8IWT3 2517 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms