RNA–Protein interactions for RNA: ENST00000628734.1

UBE2A-208, Transcript of ubiquitin conjugating enzyme E2 A, humanhuman

TSL 2

Gene UBE2A, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2A-208ENST00000628734 DOCK2Q92608 1830 aa2.77□□□□□ -1.97
UBE2A-208ENST00000628734 SIPA1L3O60292 1781 aaPredicted RBP2.77□□□□□ -1.97
UBE2A-208ENST00000628734 NUP188Q5SRE5 1749 aa2.77□□□□□ -1.97
UBE2A-208ENST00000628734 PEAK1Q9H792 1746 aa2.77□□□□□ -1.97
UBE2A-208ENST00000628734 TRBV20OR9-2A0A075B6H5 130 aa2.77□□□□□ -1.97
UBE2A-208ENST00000628734 TRAV8-3A0A0A6YYJ7 113 aa2.77□□□□□ -1.97
UBE2A-208ENST00000628734 IGKV1D-13A0A0B4J2D9 117 aa2.77□□□□□ -1.97
UBE2A-208ENST00000628734 TRBV27A0A0K0K1C4 114 aa2.77□□□□□ -1.97
UBE2A-208ENST00000628734 LOC100131303A0A0U1RQF7 123 aa2.77□□□□□ -1.97
UBE2A-208ENST00000628734 PGPA6NDG6 321 aa2.77□□□□□ -1.97
UBE2A-208ENST00000628734 A6NIN4 97 aa2.77□□□□□ -1.97
UBE2A-208ENST00000628734 A8MUN3 132 aa2.77□□□□□ -1.97
UBE2A-208ENST00000628734 SNURFLB1AK76 121 aa2.77□□□□□ -1.97
UBE2A-208ENST00000628734 H0Y9J4 135 aa2.77□□□□□ -1.97
UBE2A-208ENST00000628734 TMEM256-PLSCR3K7ERE1 68 aa2.77□□□□□ -1.97
UBE2A-208ENST00000628734 HLA-DQA1P01909 254 aa2.77□□□□□ -1.97
UBE2A-208ENST00000628734 APCSP02743 223 aa2.77□□□□□ -1.97
UBE2A-208ENST00000628734 IGKV1-13P0DP09 117 aa2.77□□□□□ -1.97
UBE2A-208ENST00000628734 ZNF823P16415 610 aa2.77□□□□□ -1.97
UBE2A-208ENST00000628734 DSCR4P56555 118 aaPredicted RBP2.77□□□□□ -1.97
UBE2A-208ENST00000628734 SNRPGP62308 76 aaKnown RBP2.77□□□□□ -1.97
UBE2A-208ENST00000628734 SRSF9Q13242 221 aaKnown RBP eCLIP2.77□□□□□ -1.97
UBE2A-208ENST00000628734 ZNF791Q3KP31 576 aaPredicted RBP2.77□□□□□ -1.97
UBE2A-208ENST00000628734 FAM78AQ5JUQ0 283 aa2.77□□□□□ -1.97
UBE2A-208ENST00000628734 SPANXN4Q5MJ08 99 aa2.77□□□□□ -1.97
UBE2A-208ENST00000628734 ADAMTSL4-AS1Q5T5F5 129 aa2.77□□□□□ -1.97
UBE2A-208ENST00000628734 NOXRED1Q6NXP6 359 aa2.77□□□□□ -1.97
UBE2A-208ENST00000628734 LCA10Q71F78 164 aa2.77□□□□□ -1.97
UBE2A-208ENST00000628734 CLDND2Q8NHS1 167 aa2.77□□□□□ -1.97
UBE2A-208ENST00000628734 CNRIP1Q96F85 164 aaPredicted RBP2.77□□□□□ -1.97
UBE2A-208ENST00000628734 CHAC1Q9BUX1 264 aa2.77□□□□□ -1.97
UBE2A-208ENST00000628734 CTSZQ9UBR2 303 aa2.77□□□□□ -1.97
UBE2A-208ENST00000628734 LINC00527Q9UJ94 153 aa2.77□□□□□ -1.97
UBE2A-208ENST00000628734 MOB4Q9Y3A3 225 aa2.77□□□□□ -1.97
UBE2A-208ENST00000628734 V9GY05 133 aa2.77□□□□□ -1.97
UBE2A-208ENST00000628734 SAMD9LQ8IVG5 1584 aa2.77□□□□□ -1.97
UBE2A-208ENST00000628734 COL5A3P25940 1745 aaPredicted RBP2.76□□□□□ -1.97
UBE2A-208ENST00000628734 PIK3C2AO00443 1686 aa2.76□□□□□ -1.97
UBE2A-208ENST00000628734 DNMT1P26358 1616 aaKnown RBP2.76□□□□□ -1.97
UBE2A-208ENST00000628734 IGKV1D-43A0A0B4J1Z2 117 aa2.76□□□□□ -1.97
UBE2A-208ENST00000628734 TRAV17A0A0B4J275 112 aa2.76□□□□□ -1.97
UBE2A-208ENST00000628734 F2Z2F3 143 aa2.76□□□□□ -1.97
UBE2A-208ENST00000628734 K7ERJ3 54 aa2.76□□□□□ -1.97
UBE2A-208ENST00000628734 CPSF4O95639 269 aaKnown RBP2.76□□□□□ -1.97
UBE2A-208ENST00000628734 SCGB1C2P0DMR2 95 aa2.76□□□□□ -1.97
UBE2A-208ENST00000628734 ZNF80P51504 273 aaPredicted RBP2.76□□□□□ -1.97
UBE2A-208ENST00000628734 MP68P56378 58 aa2.76□□□□□ -1.97
UBE2A-208ENST00000628734 HERVK_113P61574 105 aa2.76□□□□□ -1.97
UBE2A-208ENST00000628734 UBE2L3P68036 154 aaKnown RBP2.76□□□□□ -1.97
UBE2A-208ENST00000628734 CCL20P78556 96 aa2.76□□□□□ -1.97
UBE2A-208ENST00000628734 CCL8P80075 99 aa2.76□□□□□ -1.97
UBE2A-208ENST00000628734 SS18Q15532 418 aa2.76□□□□□ -1.97
UBE2A-208ENST00000628734 EBLN2Q6P2I7 272 aa2.76□□□□□ -1.97
UBE2A-208ENST00000628734 TSKUQ8WUA8 353 aa2.76□□□□□ -1.97
UBE2A-208ENST00000628734 IL1F10Q8WWZ1 152 aa2.76□□□□□ -1.97
UBE2A-208ENST00000628734 C2orf50Q96LR7 162 aa2.76□□□□□ -1.97
UBE2A-208ENST00000628734 MGST2Q99735 147 aa2.76□□□□□ -1.97
UBE2A-208ENST00000628734 HDHD3Q9BSH5 251 aaPredicted RBP2.76□□□□□ -1.97
UBE2A-208ENST00000628734 PARP12Q9H0J9 701 aaKnown RBP2.76□□□□□ -1.97
UBE2A-208ENST00000628734 ZNF286AQ9HBT8 521 aa2.76□□□□□ -1.97
UBE2A-208ENST00000628734 NXT2Q9NPJ8 142 aaKnown RBP2.76□□□□□ -1.97
UBE2A-208ENST00000628734 ZNF71Q9NQZ8 489 aaPredicted RBP2.76□□□□□ -1.97
UBE2A-208ENST00000628734 CMC2Q9NRP2 79 aa2.76□□□□□ -1.97
UBE2A-208ENST00000628734 CALYQ9NYX4 217 aa2.76□□□□□ -1.97
UBE2A-208ENST00000628734 HIGD1BQ9P298 99 aa2.76□□□□□ -1.97
UBE2A-208ENST00000628734 LINC00588Q9Y4M8 146 aa2.76□□□□□ -1.97
UBE2A-208ENST00000628734 ZNF646O15015 1829 aaPredicted RBP2.76□□□□□ -1.97
UBE2A-208ENST00000628734 RGPD8O14715 1765 aaPredicted RBP2.76□□□□□ -1.97
UBE2A-208ENST00000628734 UBR2Q8IWV8 1755 aa2.76□□□□□ -1.97
UBE2A-208ENST00000628734 RGPD5Q99666 1765 aa2.76□□□□□ -1.97
UBE2A-208ENST00000628734 RGPD1P0DJD0 1748 aa2.76□□□□□ -1.97
UBE2A-208ENST00000628734 ADAMTS9Q9P2N4 1935 aa2.76□□□□□ -1.97
UBE2A-208ENST00000628734 KDM6BO15054 1643 aa2.75□□□□□ -1.97
UBE2A-208ENST00000628734 PDCD11Q14690 1871 aaKnown RBP2.75□□□□□ -1.97
UBE2A-208ENST00000628734 TRPM7Q96QT4 1865 aa2.75□□□□□ -1.97
UBE2A-208ENST00000628734 PLXNA4Q9HCM2 1894 aa2.75□□□□□ -1.97
UBE2A-208ENST00000628734 EPOPA6NHQ4 379 aa2.75□□□□□ -1.97
UBE2A-208ENST00000628734 C2orf70A6NJV1 201 aa2.75□□□□□ -1.97
UBE2A-208ENST00000628734 KLLNB2CW77 178 aa2.75□□□□□ -1.97
UBE2A-208ENST00000628734 COX7A2LO14548 114 aa2.75□□□□□ -1.97
UBE2A-208ENST00000628734 FCGR2CP31995 323 aa2.75□□□□□ -1.97
UBE2A-208ENST00000628734 PSMB2P49721 201 aa2.75□□□□□ -1.97
UBE2A-208ENST00000628734 CSRP3P50461 194 aa2.75□□□□□ -1.97
UBE2A-208ENST00000628734 ZNF136P52737 540 aa2.75□□□□□ -1.97
UBE2A-208ENST00000628734 EFNA4P52798 201 aa2.75□□□□□ -1.97
UBE2A-208ENST00000628734 LINC00313P59037 77 aa2.75□□□□□ -1.97
UBE2A-208ENST00000628734 RPS18P62269 152 aaKnown RBP2.75□□□□□ -1.97
UBE2A-208ENST00000628734 HIST1H4AP62805 103 aaKnown RBP2.75□□□□□ -1.97
UBE2A-208ENST00000628734 RPL23P62829 140 aaKnown RBP2.75□□□□□ -1.97
UBE2A-208ENST00000628734 HBBP68871 147 aa2.75□□□□□ -1.97
UBE2A-208ENST00000628734 PRNTQ86SH4 94 aa2.75□□□□□ -1.97
UBE2A-208ENST00000628734 Q8N2B8 174 aa2.75□□□□□ -1.97
UBE2A-208ENST00000628734 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.75□□□□□ -1.97
UBE2A-208ENST00000628734 C11orf72Q8NBR9 251 aa2.75□□□□□ -1.97
UBE2A-208ENST00000628734 MORN4Q8NDC4 146 aa2.75□□□□□ -1.97
UBE2A-208ENST00000628734 TOMM6Q96B49 74 aa2.75□□□□□ -1.97
UBE2A-208ENST00000628734 TIMM17AQ99595 171 aa2.75□□□□□ -1.97
UBE2A-208ENST00000628734 CYSTM1Q9H1C7 97 aa2.75□□□□□ -1.97
UBE2A-208ENST00000628734 CXCL16Q9H2A7 254 aa2.75□□□□□ -1.97
UBE2A-208ENST00000628734 PTPRMP28827 1452 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms