RNA–Protein interactions for RNA: ENST00000628347.1

SOX2-OT-247, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 445 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-247ENST00000628347 CCSO14618 274 aa8.71□□□□□ -1.02
SOX2-OT-247ENST00000628347 LYRM1O43325 122 aa8.71□□□□□ -1.02
SOX2-OT-247ENST00000628347 NUDT3O95989 172 aa8.71□□□□□ -1.02
SOX2-OT-247ENST00000628347 TCRBP04435 133 aa8.71□□□□□ -1.02
SOX2-OT-247ENST00000628347 CCL18P55774 89 aa8.71□□□□□ -1.02
SOX2-OT-247ENST00000628347 GUK1Q16774 197 aa8.71□□□□□ -1.02
SOX2-OT-247ENST00000628347 VWC2Q2TAL6 325 aa8.71□□□□□ -1.02
SOX2-OT-247ENST00000628347 GFI1BQ5VTD9 330 aa8.71□□□□□ -1.02
SOX2-OT-247ENST00000628347 Q6ZRG5 221 aa8.71□□□□□ -1.02
SOX2-OT-247ENST00000628347 NRARPQ7Z6K4 114 aa8.71□□□□□ -1.02
SOX2-OT-247ENST00000628347 OR1L4Q8NGR5 311 aa8.71□□□□□ -1.02
SOX2-OT-247ENST00000628347 ZNF431Q8TF32 576 aaPredicted RBP8.71□□□□□ -1.02
SOX2-OT-247ENST00000628347 RNF141Q8WVD5 230 aa8.71□□□□□ -1.02
SOX2-OT-247ENST00000628347 NOP10Q9NPE3 64 aaKnown RBP8.71□□□□□ -1.02
SOX2-OT-247ENST00000628347 WDR83OSQ9Y284 106 aa8.71□□□□□ -1.02
SOX2-OT-247ENST00000628347 LSM5Q9Y4Y9 91 aaKnown RBP8.71□□□□□ -1.02
SOX2-OT-247ENST00000628347 H3BQ15 152 aa8.7□□□□□ -1.02
SOX2-OT-247ENST00000628347 ZNF253O75346 499 aa8.7□□□□□ -1.02
SOX2-OT-247ENST00000628347 PRB4P10163 310 aaPredicted RBP8.7□□□□□ -1.02
SOX2-OT-247ENST00000628347 HTN1P15515 57 aa8.7□□□□□ -1.02
SOX2-OT-247ENST00000628347 RPL29P47914 159 aaKnown RBP8.7□□□□□ -1.02
SOX2-OT-247ENST00000628347 KIR3DS1Q14943 382 aa8.7□□□□□ -1.02
SOX2-OT-247ENST00000628347 CHAC2Q8WUX2 184 aa8.7□□□□□ -1.02
SOX2-OT-247ENST00000628347 ZNF503Q96F45 646 aa8.7□□□□□ -1.02
SOX2-OT-247ENST00000628347 C2orf50Q96LR7 162 aa8.7□□□□□ -1.02
SOX2-OT-247ENST00000628347 PFDN5Q99471 154 aa8.7□□□□□ -1.02
SOX2-OT-247ENST00000628347 UQCC1Q9NVA1 299 aa8.7□□□□□ -1.02
SOX2-OT-247ENST00000628347 LINC00588Q9Y4M8 146 aa8.7□□□□□ -1.02
SOX2-OT-247ENST00000628347 FAM24AA6NFZ4 105 aa8.69□□□□□ -1.02
SOX2-OT-247ENST00000628347 NPIPB6E9PJ23 425 aa8.69□□□□□ -1.02
SOX2-OT-247ENST00000628347 H3BTX0 84 aa8.69□□□□□ -1.02
SOX2-OT-247ENST00000628347 SNRPCP09234 159 aaKnown RBP8.69□□□□□ -1.02
SOX2-OT-247ENST00000628347 CT45A10P0DMU9 189 aa8.69□□□□□ -1.02
SOX2-OT-247ENST00000628347 PVALBP20472 110 aaPredicted RBP8.69□□□□□ -1.02
SOX2-OT-247ENST00000628347 LEPP41159 167 aa8.69□□□□□ -1.02
SOX2-OT-247ENST00000628347 BCAP31P51572 246 aa8.69□□□□□ -1.02
SOX2-OT-247ENST00000628347 CAV2P51636 162 aa8.69□□□□□ -1.02
SOX2-OT-247ENST00000628347 IL15RAQ13261 267 aa8.69□□□□□ -1.02
SOX2-OT-247ENST00000628347 MIC13Q5XKP0 118 aa8.69□□□□□ -1.02
SOX2-OT-247ENST00000628347 ZNF575Q86XF7 245 aa8.69□□□□□ -1.02
SOX2-OT-247ENST00000628347 CCDC28AQ8IWP9 274 aa8.69□□□□□ -1.02
SOX2-OT-247ENST00000628347 C6orf223Q8N319 242 aa8.69□□□□□ -1.02
SOX2-OT-247ENST00000628347 C12orf45Q8N5I9 185 aaPredicted RBP8.69□□□□□ -1.02
SOX2-OT-247ENST00000628347 MRPL53Q96EL3 112 aaKnown RBP8.69□□□□□ -1.02
SOX2-OT-247ENST00000628347 PARD6GQ9BYG4 376 aaPredicted RBP8.69□□□□□ -1.02
SOX2-OT-247ENST00000628347 LYRM2Q9NU23 88 aaPredicted RBP8.69□□□□□ -1.02
SOX2-OT-247ENST00000628347 TRAV6A0A075B6T7 132 aa8.68□□□□□ -1.02
SOX2-OT-247ENST00000628347 C5orf51A6NDU8 294 aa8.68□□□□□ -1.02
SOX2-OT-247ENST00000628347 FAM25EA8MYX2 175 aa8.68□□□□□ -1.02
SOX2-OT-247ENST00000628347 CST7O76096 145 aa8.68□□□□□ -1.02
SOX2-OT-247ENST00000628347 S100A11P31949 105 aa8.68□□□□□ -1.02
SOX2-OT-247ENST00000628347 SULT1A1P50225 295 aa8.68□□□□□ -1.02
SOX2-OT-247ENST00000628347 RXFP4Q8TDU9 374 aa8.68□□□□□ -1.02
SOX2-OT-247ENST00000628347 SEC22CQ9BRL7 303 aa8.68□□□□□ -1.02
SOX2-OT-247ENST00000628347 PYGO2Q9BRQ0 406 aa8.68□□□□□ -1.02
SOX2-OT-247ENST00000628347 SLC39A9Q9NUM3 307 aa8.68□□□□□ -1.02
SOX2-OT-247ENST00000628347 NUDT15Q9NV35 164 aa8.68□□□□□ -1.02
SOX2-OT-247ENST00000628347 ZNF586Q9NXT0 402 aa8.68□□□□□ -1.02
SOX2-OT-247ENST00000628347 NDUFA13Q9P0J0 144 aa8.68□□□□□ -1.02
SOX2-OT-247ENST00000628347 TMEM14CQ9P0S9 112 aa8.68□□□□□ -1.02
SOX2-OT-247ENST00000628347 TRAV5A0A0B4J249 113 aa8.67□□□□□ -1.02
SOX2-OT-247ENST00000628347 SNURFLB1AK76 121 aa8.67□□□□□ -1.02
SOX2-OT-247ENST00000628347 H3BNG1 76 aa8.67□□□□□ -1.02
SOX2-OT-247ENST00000628347 M6PRP20645 277 aa8.67□□□□□ -1.02
SOX2-OT-247ENST00000628347 TNP2Q05952 138 aa8.67□□□□□ -1.02
SOX2-OT-247ENST00000628347 DAZ2Q13117 558 aaKnown RBP8.67□□□□□ -1.02
SOX2-OT-247ENST00000628347 PDE6HQ13956 83 aa8.67□□□□□ -1.02
SOX2-OT-247ENST00000628347 CLINT1Q14677 625 aa8.67□□□□□ -1.02
SOX2-OT-247ENST00000628347 ATP6V1FQ16864 119 aa8.67□□□□□ -1.02
SOX2-OT-247ENST00000628347 SSX7Q7RTT5 188 aa8.67□□□□□ -1.02
SOX2-OT-247ENST00000628347 TMEM252Q8N6L7 170 aa8.67□□□□□ -1.02
SOX2-OT-247ENST00000628347 CCDC32Q9BV29 185 aa8.67□□□□□ -1.02
SOX2-OT-247ENST00000628347 PRELID1Q9Y255 219 aa8.67□□□□□ -1.02
SOX2-OT-247ENST00000628347 TRBV19A0A075B6N1 114 aa8.66□□□□□ -1.02
SOX2-OT-247ENST00000628347 TRAV26-1A0A087WT03 109 aa8.66□□□□□ -1.02
SOX2-OT-247ENST00000628347 UBE2L5PA0A1B0GUS4 154 aa8.66□□□□□ -1.02
SOX2-OT-247ENST00000628347 IGSF23A1L1A6 192 aa8.66□□□□□ -1.02
SOX2-OT-247ENST00000628347 MPDU1O75352 247 aa8.66□□□□□ -1.02
SOX2-OT-247ENST00000628347 RLN2P04090 185 aa8.66□□□□□ -1.02
SOX2-OT-247ENST00000628347 SLC25A5P05141 298 aaKnown RBP8.66□□□□□ -1.02
SOX2-OT-247ENST00000628347 H2AFB2P0C5Z0 115 aa8.66□□□□□ -1.02
SOX2-OT-247ENST00000628347 HBG1P69891 147 aa8.66□□□□□ -1.02
SOX2-OT-247ENST00000628347 HBG2P69892 147 aa8.66□□□□□ -1.02
SOX2-OT-247ENST00000628347 BAXQ07812 192 aa8.66□□□□□ -1.02
SOX2-OT-247ENST00000628347 OR5I1Q13606 314 aa8.66□□□□□ -1.02
SOX2-OT-247ENST00000628347 STX12Q86Y82 276 aa8.66□□□□□ -1.02
SOX2-OT-247ENST00000628347 GNPNAT1Q96EK6 184 aaPredicted RBP8.66□□□□□ -1.02
SOX2-OT-247ENST00000628347 FAM19A4Q96LR4 140 aa8.66□□□□□ -1.02
SOX2-OT-247ENST00000628347 C18orf15Q96N68 181 aa8.66□□□□□ -1.02
SOX2-OT-247ENST00000628347 LINC00467Q9BRT7 94 aa8.66□□□□□ -1.02
SOX2-OT-247ENST00000628347 UPK3BQ9BT76 320 aa8.66□□□□□ -1.02
SOX2-OT-247ENST00000628347 TRAV12-3A0A0B4J271 114 aa8.65□□□□□ -1.02
SOX2-OT-247ENST00000628347 GAGE12BA1L429 117 aa8.65□□□□□ -1.02
SOX2-OT-247ENST00000628347 KLLNB2CW77 178 aa8.65□□□□□ -1.02
SOX2-OT-247ENST00000628347 GAGE7O76087 117 aa8.65□□□□□ -1.02
SOX2-OT-247ENST00000628347 GAGE12FP0CL80 117 aa8.65□□□□□ -1.02
SOX2-OT-247ENST00000628347 GAGE12GP0CL81 117 aa8.65□□□□□ -1.02
SOX2-OT-247ENST00000628347 GAGE12IP0CL82 117 aa8.65□□□□□ -1.02
SOX2-OT-247ENST00000628347 HIST1H1EP10412 219 aaKnown RBP8.65□□□□□ -1.02
SOX2-OT-247ENST00000628347 HOXA5P20719 270 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms