RNA–Protein interactions for RNA: ENST00000628018.2

CAPNS1-215, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-215ENST00000628018 ISLRO14498 428 aa18.81■□□□□ 0.6
CAPNS1-215ENST00000628018 CSN1S1P47710 185 aa18.81■□□□□ 0.6
CAPNS1-215ENST00000628018 RHEBQ15382 184 aa18.81■□□□□ 0.6
CAPNS1-215ENST00000628018 CENPWQ5EE01 88 aa18.81■□□□□ 0.6
CAPNS1-215ENST00000628018 GOLT1AQ6ZVE7 132 aa18.81■□□□□ 0.6
CAPNS1-215ENST00000628018 MLXQ9UH92 298 aa18.81■□□□□ 0.6
CAPNS1-215ENST00000628018 SELENOKQ9Y6D0 94 aa18.81■□□□□ 0.6
CAPNS1-215ENST00000628018 LY96Q9Y6Y9 160 aa18.81■□□□□ 0.6
CAPNS1-215ENST00000628018 M0QZ24 198 aa18.8■□□□□ 0.6
CAPNS1-215ENST00000628018 S100A9P06702 114 aaKnown RBP18.8■□□□□ 0.6
CAPNS1-215ENST00000628018 CSN3P07498 182 aa18.8■□□□□ 0.6
CAPNS1-215ENST00000628018 GNG4P50150 75 aa18.8■□□□□ 0.6
CAPNS1-215ENST00000628018 ADIRFQ15847 76 aa18.8■□□□□ 0.6
CAPNS1-215ENST00000628018 OCC1Q8TAD7 63 aa18.8■□□□□ 0.6
CAPNS1-215ENST00000628018 FMC1Q96HJ9 113 aa18.8■□□□□ 0.6
CAPNS1-215ENST00000628018 C16orf92Q96LL3 132 aa18.8■□□□□ 0.6
CAPNS1-215ENST00000628018 CLEC5AQ9NY25 188 aa18.8■□□□□ 0.6
CAPNS1-215ENST00000628018 B4DEV8 164 aa18.79■□□□□ 0.6
CAPNS1-215ENST00000628018 UBE2G1P62253 170 aa18.79■□□□□ 0.6
CAPNS1-215ENST00000628018 LCN12Q6JVE5 192 aa18.79■□□□□ 0.6
CAPNS1-215ENST00000628018 RNF182Q8N6D2 247 aa18.79■□□□□ 0.6
CAPNS1-215ENST00000628018 SERTM2A0A1B0GWG4 89 aa18.79■□□□□ 0.6
CAPNS1-215ENST00000628018 IGLV2-11P01706 119 aa18.79■□□□□ 0.6
CAPNS1-215ENST00000628018 MRPL53Q96EL3 112 aaKnown RBP18.79■□□□□ 0.6
CAPNS1-215ENST00000628018 RPS10P5Q9NQ39 176 aa18.79■□□□□ 0.6
CAPNS1-215ENST00000628018 TEP1Q99973 2627 aaKnown RBP18.78■□□□□ 0.6
CAPNS1-215ENST00000628018 ZNF705FA8MVS1 300 aaPredicted RBP18.78■□□□□ 0.6
CAPNS1-215ENST00000628018 K7EQM0 130 aa18.78■□□□□ 0.6
CAPNS1-215ENST00000628018 IGLV2-8P01709 118 aa18.78■□□□□ 0.6
CAPNS1-215ENST00000628018 TMEM75Q8N9X5 138 aa18.78■□□□□ 0.6
CAPNS1-215ENST00000628018 SGK494Q96LW2 274 aa18.78■□□□□ 0.6
CAPNS1-215ENST00000628018 AURKAIP1Q9NWT8 199 aaPredicted RBP18.78■□□□□ 0.6
CAPNS1-215ENST00000628018 IGKV3-7A0A075B6H7 116 aa18.77■□□□□ 0.6
CAPNS1-215ENST00000628018 TRBV6-1A0A0K0K1D8 114 aa18.77■□□□□ 0.6
CAPNS1-215ENST00000628018 DCANP1Q8TF63 244 aa18.77■□□□□ 0.6
CAPNS1-215ENST00000628018 TRAV8-1A0A0A6YYK1 113 aa18.76■□□□□ 0.59
CAPNS1-215ENST00000628018 OVOL1O14753 267 aa18.76■□□□□ 0.59
CAPNS1-215ENST00000628018 PRB4P10163 310 aaPredicted RBP18.76■□□□□ 0.59
CAPNS1-215ENST00000628018 PSG3Q16557 428 aa18.76■□□□□ 0.59
CAPNS1-215ENST00000628018 BAGE2Q86Y30 109 aa18.76■□□□□ 0.59
CAPNS1-215ENST00000628018 MS4A6AQ9H2W1 248 aa18.76■□□□□ 0.59
CAPNS1-215ENST00000628018 K7EN84 100 aa18.75■□□□□ 0.59
CAPNS1-215ENST00000628018 LTAP01374 205 aa18.75■□□□□ 0.59
CAPNS1-215ENST00000628018 SAMD13Q5VXD3 122 aa18.75■□□□□ 0.59
CAPNS1-215ENST00000628018 ISOC2Q96AB3 205 aa18.75■□□□□ 0.59
CAPNS1-215ENST00000628018 C20orf173Q96LM9 149 aa18.75■□□□□ 0.59
CAPNS1-215ENST00000628018 JMJD1CQ15652 2540 aa18.75■□□□□ 0.59
CAPNS1-215ENST00000628018 A0A087WWC5 75 aa18.74■□□□□ 0.59
CAPNS1-215ENST00000628018 GBGT1Q8N5D6 347 aa18.74■□□□□ 0.59
CAPNS1-215ENST00000628018 CITED1Q99966 193 aa18.74■□□□□ 0.59
CAPNS1-215ENST00000628018 IGKV2-40A0A087WW87 121 aaPredicted RBP18.74■□□□□ 0.59
CAPNS1-215ENST00000628018 PRAC2D3DTV9 90 aa18.74■□□□□ 0.59
CAPNS1-215ENST00000628018 TSPAN4O14817 238 aa18.74■□□□□ 0.59
CAPNS1-215ENST00000628018 IGKV2D-40P01614 121 aaPredicted RBP18.74■□□□□ 0.59
CAPNS1-215ENST00000628018 FLI1Q01543 452 aaPredicted RBP18.74■□□□□ 0.59
CAPNS1-215ENST00000628018 KRTAP24-1Q3LI83 254 aa18.74■□□□□ 0.59
CAPNS1-215ENST00000628018 Q86TA4 180 aa18.74■□□□□ 0.59
CAPNS1-215ENST00000628018 SMIM12Q96EX1 92 aa18.74■□□□□ 0.59
CAPNS1-215ENST00000628018 SIGLEC8Q9NYZ4 499 aa18.74■□□□□ 0.59
CAPNS1-215ENST00000628018 RNF212Q495C1 297 aa18.73■□□□□ 0.59
CAPNS1-215ENST00000628018 MLST8Q9BVC4 326 aa18.73■□□□□ 0.59
CAPNS1-215ENST00000628018 PSG8Q9UQ74 426 aa18.73■□□□□ 0.59
CAPNS1-215ENST00000628018 RBAKDNA6NC62 111 aa18.72■□□□□ 0.59
CAPNS1-215ENST00000628018 BTN1A1Q13410 526 aa18.72■□□□□ 0.59
CAPNS1-215ENST00000628018 PRNTQ86SH4 94 aa18.72■□□□□ 0.59
CAPNS1-215ENST00000628018 PRIMA1Q86XR5 153 aa18.72■□□□□ 0.59
CAPNS1-215ENST00000628018 NHLRC2Q8NBF2 726 aa18.72■□□□□ 0.59
CAPNS1-215ENST00000628018 FBLL1A6NHQ2 334 aaKnown RBP18.71■□□□□ 0.59
CAPNS1-215ENST00000628018 K7EQG2 157 aa18.71■□□□□ 0.59
CAPNS1-215ENST00000628018 GCGP01275 180 aa18.71■□□□□ 0.59
CAPNS1-215ENST00000628018 ID1P41134 155 aa18.71■□□□□ 0.59
CAPNS1-215ENST00000628018 DEFB114Q30KQ6 69 aa18.71■□□□□ 0.59
CAPNS1-215ENST00000628018 WFDC3Q8IUB2 231 aa18.71■□□□□ 0.59
CAPNS1-215ENST00000628018 DYNLRB2Q8TF09 96 aa18.71■□□□□ 0.59
CAPNS1-215ENST00000628018 DNASE2O00115 360 aaPredicted RBP18.7■□□□□ 0.58
CAPNS1-215ENST00000628018 MT-ND4LP03901 98 aa18.7■□□□□ 0.58
CAPNS1-215ENST00000628018 TMEM88Q6PEY1 159 aa18.7■□□□□ 0.58
CAPNS1-215ENST00000628018 VGLL1Q99990 258 aa18.7■□□□□ 0.58
CAPNS1-215ENST00000628018 OR5I1Q13606 314 aa18.69■□□□□ 0.58
CAPNS1-215ENST00000628018 CBLN2Q8IUK8 224 aa18.69■□□□□ 0.58
CAPNS1-215ENST00000628018 ZNF738Q8NE65 137 aa18.69■□□□□ 0.58
CAPNS1-215ENST00000628018 SFRP2Q96HF1 295 aa18.69■□□□□ 0.58
CAPNS1-215ENST00000628018 CTDSP1Q9GZU7 261 aa18.69■□□□□ 0.58
CAPNS1-215ENST00000628018 TMEM242Q9NWH2 141 aa18.69■□□□□ 0.58
CAPNS1-215ENST00000628018 ZFP30Q9Y2G7 519 aa18.69■□□□□ 0.58
CAPNS1-215ENST00000628018 MGST1P10620 155 aaKnown RBP18.69■□□□□ 0.58
CAPNS1-215ENST00000628018 TFPI2P48307 235 aa18.69■□□□□ 0.58
CAPNS1-215ENST00000628018 PAFAH1B2P68402 229 aa18.69■□□□□ 0.58
CAPNS1-215ENST00000628018 TMEM183AQ8IXX5 376 aa18.69■□□□□ 0.58
CAPNS1-215ENST00000628018 ANAPC16Q96DE5 110 aa18.69■□□□□ 0.58
CAPNS1-215ENST00000628018 RBPMS2Q6ZRY4 209 aaKnown RBP18.68■□□□□ 0.58
CAPNS1-215ENST00000628018 TMEM61Q8N0U2 210 aa18.68■□□□□ 0.58
CAPNS1-215ENST00000628018 SMCO4Q9NRQ5 59 aa18.68■□□□□ 0.58
CAPNS1-215ENST00000628018 TRAV2A0A0B4J234 112 aa18.67■□□□□ 0.58
CAPNS1-215ENST00000628018 FAM24BQ8N5W8 94 aa18.67■□□□□ 0.58
CAPNS1-215ENST00000628018 PF4P02776 101 aa18.66■□□□□ 0.58
CAPNS1-215ENST00000628018 ERCC8Q13216 396 aa18.66■□□□□ 0.58
CAPNS1-215ENST00000628018 CD300EQ496F6 205 aaPredicted RBP18.66■□□□□ 0.58
CAPNS1-215ENST00000628018 C9orf47Q6ZRZ4 202 aa18.66■□□□□ 0.58
CAPNS1-215ENST00000628018 ASCL2Q99929 193 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms