RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 SLC17A3O00476 420 aa7.69□□□□□ -1.18
SSBP4-215ENST00000625926 MPDU1O75352 247 aa7.69□□□□□ -1.18
SSBP4-215ENST00000625926 HTN1P15515 57 aa7.69□□□□□ -1.18
SSBP4-215ENST00000625926 AZU1P20160 251 aa7.69□□□□□ -1.18
SSBP4-215ENST00000625926 CYCSP99999 105 aaKnown RBP7.69□□□□□ -1.18
SSBP4-215ENST00000625926 IFITM3Q01628 133 aa7.69□□□□□ -1.18
SSBP4-215ENST00000625926 NHLH2Q02577 135 aa7.69□□□□□ -1.18
SSBP4-215ENST00000625926 NMES1Q9C002 83 aa7.69□□□□□ -1.18
SSBP4-215ENST00000625926 PRAC2D3DTV9 90 aa7.68□□□□□ -1.18
SSBP4-215ENST00000625926 H7BYZ3 331 aa7.68□□□□□ -1.18
SSBP4-215ENST00000625926 ZNF253O75346 499 aa7.68□□□□□ -1.18
SSBP4-215ENST00000625926 DEFB130BP0DP73 79 aa7.68□□□□□ -1.18
SSBP4-215ENST00000625926 DEFB130AP0DP74 79 aa7.68□□□□□ -1.18
SSBP4-215ENST00000625926 LRRC37A5PQ49AS3 106 aa7.68□□□□□ -1.18
SSBP4-215ENST00000625926 ZNF493Q6ZR52 646 aa7.68□□□□□ -1.18
SSBP4-215ENST00000625926 OR5C1Q8NGR4 320 aa7.68□□□□□ -1.18
SSBP4-215ENST00000625926 C16orf74Q96GX8 76 aa7.68□□□□□ -1.18
SSBP4-215ENST00000625926 C20orf144Q9BQM9 153 aa7.68□□□□□ -1.18
SSBP4-215ENST00000625926 NPCDR1Q9BY65 106 aa7.68□□□□□ -1.18
SSBP4-215ENST00000625926 ZNF586Q9NXT0 402 aa7.68□□□□□ -1.18
SSBP4-215ENST00000625926 TMEM14CQ9P0S9 112 aa7.68□□□□□ -1.18
SSBP4-215ENST00000625926 TRBV19A0A075B6N1 114 aa7.67□□□□□ -1.18
SSBP4-215ENST00000625926 PLAC8L1A1L4L8 177 aa7.67□□□□□ -1.18
SSBP4-215ENST00000625926 DEFA1P59665 94 aa7.67□□□□□ -1.18
SSBP4-215ENST00000625926 DEFA3P59666 94 aa7.67□□□□□ -1.18
SSBP4-215ENST00000625926 TMEM88Q6PEY1 159 aa7.67□□□□□ -1.18
SSBP4-215ENST00000625926 UBE2DNLQ8IWF7 75 aa7.67□□□□□ -1.18
SSBP4-215ENST00000625926 MARVELD1Q9BSK0 173 aa7.67□□□□□ -1.18
SSBP4-215ENST00000625926 OR5AC2Q9NZP5 309 aa7.67□□□□□ -1.18
SSBP4-215ENST00000625926 TIMM9Q9Y5J7 89 aa7.67□□□□□ -1.18
SSBP4-215ENST00000625926 UBR4Q5T4S7 5183 aa7.67□□□□□ -1.18
SSBP4-215ENST00000625926 AGRNO00468 2067 aa7.66□□□□□ -1.18
SSBP4-215ENST00000625926 CBY3A6NI87 242 aa7.66□□□□□ -1.18
SSBP4-215ENST00000625926 NPIPB6E9PJ23 425 aa7.66□□□□□ -1.18
SSBP4-215ENST00000625926 H0YIZ8 118 aa7.66□□□□□ -1.18
SSBP4-215ENST00000625926 CT45A10P0DMU9 189 aa7.66□□□□□ -1.18
SSBP4-215ENST00000625926 HIST1H1EP10412 219 aaKnown RBP7.66□□□□□ -1.18
SSBP4-215ENST00000625926 LEPP41159 167 aa7.66□□□□□ -1.18
SSBP4-215ENST00000625926 KIR3DS1Q14943 382 aa7.66□□□□□ -1.18
SSBP4-215ENST00000625926 FCN2Q15485 313 aa7.66□□□□□ -1.18
SSBP4-215ENST00000625926 RNF212Q495C1 297 aa7.66□□□□□ -1.18
SSBP4-215ENST00000625926 CCDC28AQ8IWP9 274 aa7.66□□□□□ -1.18
SSBP4-215ENST00000625926 THAP6Q8TBB0 222 aa7.66□□□□□ -1.18
SSBP4-215ENST00000625926 MRPL53Q96EL3 112 aaKnown RBP7.66□□□□□ -1.18
SSBP4-215ENST00000625926 PARD6GQ9BYG4 376 aaPredicted RBP7.66□□□□□ -1.18
SSBP4-215ENST00000625926 TIMM8BQ9Y5J9 83 aaPredicted RBP7.66□□□□□ -1.18
SSBP4-215ENST00000625926 HECTD4Q9Y4D8 3996 aa7.66□□□□□ -1.18
SSBP4-215ENST00000625926 F5H768 121 aa7.65□□□□□ -1.18
SSBP4-215ENST00000625926 SSNA1O43805 119 aa7.65□□□□□ -1.18
SSBP4-215ENST00000625926 ATP5G1P05496 136 aa7.65□□□□□ -1.18
SSBP4-215ENST00000625926 ATP5G3P48201 142 aa7.65□□□□□ -1.18
SSBP4-215ENST00000625926 H2BFSP57053 126 aa7.65□□□□□ -1.18
SSBP4-215ENST00000625926 PDE6HQ13956 83 aa7.65□□□□□ -1.18
SSBP4-215ENST00000625926 CLINT1Q14677 625 aa7.65□□□□□ -1.18
SSBP4-215ENST00000625926 GCSAMLQ5JQS6 135 aa7.65□□□□□ -1.18
SSBP4-215ENST00000625926 GFI1BQ5VTD9 330 aa7.65□□□□□ -1.18
SSBP4-215ENST00000625926 LINC00336Q6ZUF6 198 aa7.65□□□□□ -1.18
SSBP4-215ENST00000625926 C15orf53Q8NAA6 179 aa7.65□□□□□ -1.18
SSBP4-215ENST00000625926 RNASE8Q8TDE3 154 aaKnown RBP7.65□□□□□ -1.18
SSBP4-215ENST00000625926 TMEM263Q8WUH6 116 aaKnown RBP7.65□□□□□ -1.18
SSBP4-215ENST00000625926 PPP1R1CQ8WVI7 109 aa7.65□□□□□ -1.18
SSBP4-215ENST00000625926 ODF3Q96PU9 254 aa7.65□□□□□ -1.18
SSBP4-215ENST00000625926 WDR61Q9GZS3 305 aaKnown RBP7.65□□□□□ -1.18
SSBP4-215ENST00000625926 KCNIP2Q9NS61 270 aa7.65□□□□□ -1.18
SSBP4-215ENST00000625926 PRELID1Q9Y255 219 aa7.65□□□□□ -1.18
SSBP4-215ENST00000625926 C17orf112F2Z3M2 114 aa7.64□□□□□ -1.19
SSBP4-215ENST00000625926 J3KRW8 73 aa7.64□□□□□ -1.19
SSBP4-215ENST00000625926 M0R2N4 97 aa7.64□□□□□ -1.19
SSBP4-215ENST00000625926 M0R3E3 92 aa7.64□□□□□ -1.19
SSBP4-215ENST00000625926 NDUFB4O95168 129 aa7.64□□□□□ -1.19
SSBP4-215ENST00000625926 PET100P0DJ07 73 aa7.64□□□□□ -1.19
SSBP4-215ENST00000625926 PYYP10082 97 aa7.64□□□□□ -1.19
SSBP4-215ENST00000625926 LGALS9BQ3B8N2 356 aa7.64□□□□□ -1.19
SSBP4-215ENST00000625926 BLNKQ8WV28 456 aa7.64□□□□□ -1.19
SSBP4-215ENST00000625926 LINC00477Q96M19 166 aa7.64□□□□□ -1.19
SSBP4-215ENST00000625926 SLC25A2Q9BXI2 301 aa7.64□□□□□ -1.19
SSBP4-215ENST00000625926 AAMDCQ9H7C9 122 aa7.64□□□□□ -1.19
SSBP4-215ENST00000625926 NOP10Q9NPE3 64 aaKnown RBP7.64□□□□□ -1.19
SSBP4-215ENST00000625926 BATF3Q9NR55 127 aa7.64□□□□□ -1.19
SSBP4-215ENST00000625926 TRAV12-3A0A0B4J271 114 aa7.63□□□□□ -1.19
SSBP4-215ENST00000625926 MPC2O95563 127 aa7.63□□□□□ -1.19
SSBP4-215ENST00000625926 SLC25A5P05141 298 aaKnown RBP7.63□□□□□ -1.19
SSBP4-215ENST00000625926 NBEAP1P0C6P0 100 aa7.63□□□□□ -1.19
SSBP4-215ENST00000625926 MIR17HGQ75NE6 70 aa7.63□□□□□ -1.19
SSBP4-215ENST00000625926 EXOC3-AS1Q8N2X6 119 aa7.63□□□□□ -1.19
SSBP4-215ENST00000625926 FAM167A-AS1Q96KT0 104 aa7.63□□□□□ -1.19
SSBP4-215ENST00000625926 ATP5SQ99766 215 aa7.63□□□□□ -1.19
SSBP4-215ENST00000625926 MRPL32Q9BYC8 188 aaKnown RBP7.63□□□□□ -1.19
SSBP4-215ENST00000625926 OR51M1Q9H341 326 aa7.63□□□□□ -1.19
SSBP4-215ENST00000625926 FAM3BP58499 235 aaPredicted RBP7.62□□□□□ -1.19
SSBP4-215ENST00000625926 ERCC8Q13216 396 aa7.62□□□□□ -1.19
SSBP4-215ENST00000625926 ICAM4Q14773 271 aa7.62□□□□□ -1.19
SSBP4-215ENST00000625926 SCGB1C1Q8TD33 95 aa7.62□□□□□ -1.19
SSBP4-215ENST00000625926 PYGO2Q9BRQ0 406 aa7.62□□□□□ -1.19
SSBP4-215ENST00000625926 ATG101Q9BSB4 218 aa7.62□□□□□ -1.19
SSBP4-215ENST00000625926 AGPAT4-IT1Q9H0P7 198 aa7.62□□□□□ -1.19
SSBP4-215ENST00000625926 FUT9Q9Y231 359 aa7.62□□□□□ -1.19
SSBP4-215ENST00000625926 HSPB11Q9Y547 144 aa7.62□□□□□ -1.19
SSBP4-215ENST00000625926 IGLV2-18A0A075B6J9 118 aa7.61□□□□□ -1.19
SSBP4-215ENST00000625926 SNURFLB1AK76 121 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms